RNA–Protein interactions for RNA: ENST00000557280.5

SEC23A-213, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 4 BASIC

Gene SEC23A, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-213ENST00000557280 RIMBP3BA6NNM3 1639 aa34.85■■■■□ 3.17
SEC23A-213ENST00000557280 RIMBP3Q9UFD9 1639 aa34.85■■■■□ 3.17
SEC23A-213ENST00000557280 SHROOM2Q13796 1616 aa34.81■■■■□ 3.16
SEC23A-213ENST00000557280 KIAA0586Q9BVV6 1533 aa34.8■■■■□ 3.16
SEC23A-213ENST00000557280 ERCC6L2Q5T890 1561 aa34.74■■■■□ 3.15
SEC23A-213ENST00000557280 KIF21BO75037 1637 aa34.71■■■■□ 3.15
SEC23A-213ENST00000557280 IQGAP2Q13576 1575 aa34.69■■■■□ 3.14
SEC23A-213ENST00000557280 JPH4Q96JJ6 628 aa34.67■■■■□ 3.14
SEC23A-213ENST00000557280 CTTNBP2Q8WZ74 1663 aa34.66■■■■□ 3.14
SEC23A-213ENST00000557280 ARAP1Q96P48 1450 aa34.65■■■■□ 3.14
SEC23A-213ENST00000557280 PRG4Q92954 1404 aaPredicted RBP34.64■■■■□ 3.14
SEC23A-213ENST00000557280 EHMT2Q96KQ7 1210 aa34.57■■■■□ 3.12
SEC23A-213ENST00000557280 GOLGA3Q08378 1498 aa34.52■■■■□ 3.12
SEC23A-213ENST00000557280 UGGT2Q9NYU1 1516 aa34.5■■■■□ 3.11
SEC23A-213ENST00000557280 CYB5RLQ6IPT4 315 aa34.47■■■■□ 3.11
SEC23A-213ENST00000557280 DISP1Q96F81 1524 aa34.46■■■■□ 3.11
SEC23A-213ENST00000557280 KIAA0556O60303 1618 aa34.39■■■■□ 3.1
SEC23A-213ENST00000557280 CARMIL2Q6F5E8 1435 aa34.37■■■■□ 3.09
SEC23A-213ENST00000557280 UBTFP17480 764 aaKnown RBP34.34■■■■□ 3.09
SEC23A-213ENST00000557280 TNIKQ9UKE5 1360 aa34.27■■■■□ 3.08
SEC23A-213ENST00000557280 RANGAP1P46060 587 aaPredicted RBP34.27■■■■□ 3.08
SEC23A-213ENST00000557280 SAMD9Q5K651 1589 aa34.26■■■■□ 3.07
SEC23A-213ENST00000557280 TTBK1Q5TCY1 1321 aaPredicted RBP34.25■■■■□ 3.07
SEC23A-213ENST00000557280 PTPRGP23470 1445 aa34.22■■■■□ 3.07
SEC23A-213ENST00000557280 P3H3Q8IVL6 736 aa34.17■■■■□ 3.06
SEC23A-213ENST00000557280 ADCY10Q96PN6 1610 aa34.12■■■■□ 3.05
SEC23A-213ENST00000557280 EFCAB5A4FU69 1503 aa34.1■■■■□ 3.05
SEC23A-213ENST00000557280 FHOD3Q2V2M9 1422 aa34.09■■■■□ 3.05
SEC23A-213ENST00000557280 LOC105371045A0A1W2PR82 267 aa34.08■■■■□ 3.05
SEC23A-213ENST00000557280 ARHGAP35Q9NRY4 1499 aa34.06■■■■□ 3.04
SEC23A-213ENST00000557280 PLB1Q6P1J6 1458 aa34.02■■■■□ 3.04
SEC23A-213ENST00000557280 UACAQ9BZF9 1416 aa34.02■■■■□ 3.04
SEC23A-213ENST00000557280 ABCC2Q92887 1545 aa33.99■■■■□ 3.03
SEC23A-213ENST00000557280 UHRF1BP1LA0JNW5 1464 aa33.98■■■■□ 3.03
SEC23A-213ENST00000557280 ABCA8O94911 1581 aa33.98■■■■□ 3.03
SEC23A-213ENST00000557280 CLIP1P30622 1438 aa33.91■■■■□ 3.02
SEC23A-213ENST00000557280 CEP162Q5TB80 1403 aa33.86■■■■□ 3.01
SEC23A-213ENST00000557280 RAPGEF6Q8TEU7 1601 aa33.85■■■■□ 3.01
SEC23A-213ENST00000557280 KDM5BQ9UGL1 1544 aa33.83■■■■□ 3.01
SEC23A-213ENST00000557280 ZCCHC11Q5TAX3 1644 aaKnown RBP33.8■■■■□ 3
SEC23A-213ENST00000557280 NPM1P06748 294 aaKnown RBP eCLIP33.79■■■■□ 3
SEC23A-213ENST00000557280 MAPKBP1O60336 1514 aa33.79■■■■□ 3
SEC23A-213ENST00000557280 NUP153P49790 1475 aaKnown RBP33.76■■■□□ 2.99
SEC23A-213ENST00000557280 FMN1Q68DA7 1419 aa33.75■■■□□ 2.99
SEC23A-213ENST00000557280 ARID3CA6NKF2 412 aa33.74■■■□□ 2.99
SEC23A-213ENST00000557280 ASXL2Q76L83 1435 aa33.68■■■□□ 2.98
SEC23A-213ENST00000557280 ATP10BO94823 1461 aa33.68■■■□□ 2.98
SEC23A-213ENST00000557280 PCF11O94913 1555 aaKnown RBP33.66■■■□□ 2.98
SEC23A-213ENST00000557280 TRHP20396 242 aaPredicted RBP33.64■■■□□ 2.98
SEC23A-213ENST00000557280 HECW1Q76N89 1606 aa33.62■■■□□ 2.97
SEC23A-213ENST00000557280 DIP2BQ9P265 1576 aa33.6■■■□□ 2.97
SEC23A-213ENST00000557280 ABCC10Q5T3U5 1492 aa33.58■■■□□ 2.97
SEC23A-213ENST00000557280 CDK13Q14004 1512 aaKnown RBP33.58■■■□□ 2.97
SEC23A-213ENST00000557280 CASKIN1Q8WXD9 1431 aa33.57■■■□□ 2.96
SEC23A-213ENST00000557280 KIF13AQ9H1H9 1805 aa33.57■■■□□ 2.96
SEC23A-213ENST00000557280 WDR7Q9Y4E6 1490 aa33.56■■■□□ 2.96
SEC23A-213ENST00000557280 ATP1B4Q9UN42 357 aaPredicted RBP33.55■■■□□ 2.96
SEC23A-213ENST00000557280 LRRIQ1Q96JM4 1722 aa33.55■■■□□ 2.96
SEC23A-213ENST00000557280 EPRSP07814 1512 aaKnown RBP33.53■■■□□ 2.96
SEC23A-213ENST00000557280 FYCO1Q9BQS8 1478 aa33.51■■■□□ 2.96
SEC23A-213ENST00000557280 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.49■■■□□ 2.95
SEC23A-213ENST00000557280 HNRNPUL2Q1KMD3 747 aaKnown RBP33.49■■■□□ 2.95
SEC23A-213ENST00000557280 FAM69CQ0P6D2 419 aa33.48■■■□□ 2.95
SEC23A-213ENST00000557280 VPS8Q8N3P4 1428 aa33.41■■■□□ 2.94
SEC23A-213ENST00000557280 GLI2P10070 1586 aa33.41■■■□□ 2.94
SEC23A-213ENST00000557280 CCDC18Q5T9S5 1454 aa33.37■■■□□ 2.93
SEC23A-213ENST00000557280 KCNH8Q96L42 1107 aa33.37■■■□□ 2.93
SEC23A-213ENST00000557280 MAP3K4Q9Y6R4 1608 aa33.31■■■□□ 2.92
SEC23A-213ENST00000557280 PLEKHD1A6NEE1 506 aa33.31■■■□□ 2.92
SEC23A-213ENST00000557280 MAGI3Q5TCQ9 1506 aa33.3■■■□□ 2.92
SEC23A-213ENST00000557280 TSPOAP1O95153 1857 aa33.27■■■□□ 2.92
SEC23A-213ENST00000557280 PPRC1Q5VV67 1664 aaKnown RBP33.26■■■□□ 2.91
SEC23A-213ENST00000557280 ABCA9Q8IUA7 1624 aa33.24■■■□□ 2.91
SEC23A-213ENST00000557280 TROQ12816 1431 aaPredicted RBP33.23■■■□□ 2.91
SEC23A-213ENST00000557280 CFAP43Q8NDM7 1665 aa33.23■■■□□ 2.91
SEC23A-213ENST00000557280 KIF14Q15058 1648 aa33.21■■■□□ 2.91
SEC23A-213ENST00000557280 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP33.2■■■□□ 2.91
SEC23A-213ENST00000557280 CDK11AQ9UQ88 783 aaPredicted RBP33.2■■■□□ 2.91
SEC23A-213ENST00000557280 TTC37Q6PGP7 1564 aa33.2■■■□□ 2.91
SEC23A-213ENST00000557280 CD109Q6YHK3 1445 aa33.18■■■□□ 2.9
SEC23A-213ENST00000557280 TIAM1Q13009 1591 aa33.15■■■□□ 2.9
SEC23A-213ENST00000557280 MTUS2Q5JR59 1369 aa33.07■■■□□ 2.88
SEC23A-213ENST00000557280 EHBP1L1Q8N3D4 1523 aa33.06■■■□□ 2.88
SEC23A-213ENST00000557280 TEX14Q8IWB6 1497 aa33.05■■■□□ 2.88
SEC23A-213ENST00000557280 MAP3K1Q13233 1512 aa33.03■■■□□ 2.88
SEC23A-213ENST00000557280 LRRC9Q6ZRR7 1453 aa32.99■■■□□ 2.87
SEC23A-213ENST00000557280 KANK4Q5T7N3 995 aaPredicted RBP32.97■■■□□ 2.87
SEC23A-213ENST00000557280 MYO5CQ9NQX4 1742 aa32.97■■■□□ 2.87
SEC23A-213ENST00000557280 PLCH2O75038 1416 aa32.94■■■□□ 2.86
SEC23A-213ENST00000557280 COL17A1Q9UMD9 1497 aaPredicted RBP32.93■■■□□ 2.86
SEC23A-213ENST00000557280 KDM6BO15054 1643 aa32.93■■■□□ 2.86
SEC23A-213ENST00000557280 FANCAO15360 1455 aa32.91■■■□□ 2.86
SEC23A-213ENST00000557280 PREX2Q70Z35 1606 aa32.9■■■□□ 2.86
SEC23A-213ENST00000557280 CDC42BPAQ5VT25 1732 aa32.9■■■□□ 2.86
SEC23A-213ENST00000557280 NEO1Q92859 1461 aa32.89■■■□□ 2.86
SEC23A-213ENST00000557280 ARAP3Q8WWN8 1544 aa32.88■■■□□ 2.85
SEC23A-213ENST00000557280 SUPT6HQ7KZ85 1726 aaKnown RBP32.88■■■□□ 2.85
SEC23A-213ENST00000557280 CDC42BPBQ9Y5S2 1711 aa32.88■■■□□ 2.85
SEC23A-213ENST00000557280 NCOA2Q15596 1464 aa32.87■■■□□ 2.85
SEC23A-213ENST00000557280 APLP2Q06481 763 aa32.87■■■□□ 2.85
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms