RNA–Protein interactions for RNA: ENST00000557265.5

SNX6-209, Transcript of sorting nexin 6, humanhuman

TSL 3

Gene SNX6, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-209ENST00000557265 FAM69CQ0P6D2 419 aa21.87■■□□□ 1.09
SNX6-209ENST00000557265 ABCC10Q5T3U5 1492 aa21.79■■□□□ 1.08
SNX6-209ENST00000557265 KIF13AQ9H1H9 1805 aa21.79■■□□□ 1.08
SNX6-209ENST00000557265 RUSC2Q8N2Y8 1516 aa21.79■■□□□ 1.08
SNX6-209ENST00000557265 IGF1RP08069 1367 aa21.76■■□□□ 1.07
SNX6-209ENST00000557265 KIAA0586Q9BVV6 1533 aa21.74■■□□□ 1.07
SNX6-209ENST00000557265 MAPKBP1O60336 1514 aa21.72■■□□□ 1.07
SNX6-209ENST00000557265 KIF27Q86VH2 1401 aa21.7■■□□□ 1.06
SNX6-209ENST00000557265 ADCY10Q96PN6 1610 aa21.69■■□□□ 1.06
SNX6-209ENST00000557265 DIP2BQ9P265 1576 aa21.66■■□□□ 1.06
SNX6-209ENST00000557265 TTBK1Q5TCY1 1321 aaPredicted RBP21.64■■□□□ 1.05
SNX6-209ENST00000557265 PTPRGP23470 1445 aa21.63■■□□□ 1.05
SNX6-209ENST00000557265 CARMIL1Q5VZK9 1371 aa21.61■■□□□ 1.05
SNX6-209ENST00000557265 KDM4FA0A1W2PPD8 638 aa21.6■■□□□ 1.05
SNX6-209ENST00000557265 CUL7Q14999 1698 aa21.57■■□□□ 1.04
SNX6-209ENST00000557265 KDM6BO15054 1643 aa21.55■■□□□ 1.04
SNX6-209ENST00000557265 TNIKQ9UKE5 1360 aa21.55■■□□□ 1.04
SNX6-209ENST00000557265 CARMIL2Q6F5E8 1435 aa21.54■■□□□ 1.04
SNX6-209ENST00000557265 ABCC2Q92887 1545 aa21.5■■□□□ 1.03
SNX6-209ENST00000557265 ASXL2Q76L83 1435 aa21.48■■□□□ 1.03
SNX6-209ENST00000557265 TSPOAP1O95153 1857 aa21.47■■□□□ 1.03
SNX6-209ENST00000557265 PLB1Q6P1J6 1458 aa21.46■■□□□ 1.03
SNX6-209ENST00000557265 UACAQ9BZF9 1416 aa21.43■■□□□ 1.02
SNX6-209ENST00000557265 IQGAP2Q13576 1575 aa21.43■■□□□ 1.02
SNX6-209ENST00000557265 UHRF1BP1LA0JNW5 1464 aa21.42■■□□□ 1.02
SNX6-209ENST00000557265 DISP1Q96F81 1524 aa21.4■■□□□ 1.02
SNX6-209ENST00000557265 GLI2P10070 1586 aa21.39■■□□□ 1.01
SNX6-209ENST00000557265 RAPGEF2Q9Y4G8 1499 aa21.33■■□□□ 1.01
SNX6-209ENST00000557265 EPRSP07814 1512 aaKnown RBP21.33■■□□□ 1
SNX6-209ENST00000557265 KDM5BQ9UGL1 1544 aa21.33■■□□□ 1
SNX6-209ENST00000557265 COL17A1Q9UMD9 1497 aaPredicted RBP21.32■■□□□ 1
SNX6-209ENST00000557265 PPRC1Q5VV67 1664 aaKnown RBP21.31■■□□□ 1
SNX6-209ENST00000557265 UGGT2Q9NYU1 1516 aa21.3■■□□□ 1
SNX6-209ENST00000557265 ADGRL1O94910 1474 aa21.28■■□□□ 1
SNX6-209ENST00000557265 TEX14Q8IWB6 1497 aa21.26■□□□□ 0.99
SNX6-209ENST00000557265 ILDR1Q86SU0 546 aaPredicted RBP21.23■□□□□ 0.99
SNX6-209ENST00000557265 KIAA0556O60303 1618 aa21.22■□□□□ 0.99
SNX6-209ENST00000557265 MAP3K4Q9Y6R4 1608 aa21.22■□□□□ 0.99
SNX6-209ENST00000557265 ZCCHC11Q5TAX3 1644 aaKnown RBP21.22■□□□□ 0.99
SNX6-209ENST00000557265 WDR7Q9Y4E6 1490 aa21.2■□□□□ 0.98
SNX6-209ENST00000557265 KCNH8Q96L42 1107 aa21.19■□□□□ 0.98
SNX6-209ENST00000557265 CD109Q6YHK3 1445 aa21.14■□□□□ 0.98
SNX6-209ENST00000557265 GOLGA3Q08378 1498 aa21.13■□□□□ 0.97
SNX6-209ENST00000557265 MAGI3Q5TCQ9 1506 aa21.09■□□□□ 0.97
SNX6-209ENST00000557265 ABCA8O94911 1581 aa21.07■□□□□ 0.96
SNX6-209ENST00000557265 ARID3CA6NKF2 412 aa21.05■□□□□ 0.96
SNX6-209ENST00000557265 HECW2Q9P2P5 1572 aa21.05■□□□□ 0.96
SNX6-209ENST00000557265 PRXQ9BXM0 1461 aa21.04■□□□□ 0.96
SNX6-209ENST00000557265 P3H3Q8IVL6 736 aa21.03■□□□□ 0.96
SNX6-209ENST00000557265 FAM9AQ8IZU1 332 aaPredicted RBP21.03■□□□□ 0.96
SNX6-209ENST00000557265 CTTNBP2Q8WZ74 1663 aa21.02■□□□□ 0.95
SNX6-209ENST00000557265 CFAP43Q8NDM7 1665 aa21■□□□□ 0.95
SNX6-209ENST00000557265 ATP10BO94823 1461 aa20.95■□□□□ 0.94
SNX6-209ENST00000557265 ARAP3Q8WWN8 1544 aa20.94■□□□□ 0.94
SNX6-209ENST00000557265 RAPGEF3O95398 923 aa20.9■□□□□ 0.94
SNX6-209ENST00000557265 PHLDB1Q86UU1 1377 aa20.89■□□□□ 0.93
SNX6-209ENST00000557265 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.89■□□□□ 0.93
SNX6-209ENST00000557265 HNRNPUL2Q1KMD3 747 aaKnown RBP20.89■□□□□ 0.93
SNX6-209ENST00000557265 CSRNP3Q8WYN3 585 aa20.88■□□□□ 0.93
SNX6-209ENST00000557265 KIF21BO75037 1637 aa20.87■□□□□ 0.93
SNX6-209ENST00000557265 RANGAP1P46060 587 aaPredicted RBP20.83■□□□□ 0.93
SNX6-209ENST00000557265 ABCA9Q8IUA7 1624 aa20.82■□□□□ 0.92
SNX6-209ENST00000557265 PTPRMP28827 1452 aa20.81■□□□□ 0.92
SNX6-209ENST00000557265 NEO1Q92859 1461 aa20.81■□□□□ 0.92
SNX6-209ENST00000557265 ARID4BQ4LE39 1312 aaPredicted RBP20.8■□□□□ 0.92
SNX6-209ENST00000557265 SAMD9Q5K651 1589 aa20.78■□□□□ 0.92
SNX6-209ENST00000557265 RAPGEF6Q8TEU7 1601 aa20.76■□□□□ 0.91
SNX6-209ENST00000557265 NUP153P49790 1475 aaKnown RBP20.75■□□□□ 0.91
SNX6-209ENST00000557265 PLEKHD1A6NEE1 506 aa20.75■□□□□ 0.91
SNX6-209ENST00000557265 FBXO41Q8TF61 875 aa20.75■□□□□ 0.91
SNX6-209ENST00000557265 ADAMTSL3P82987 1691 aa20.73■□□□□ 0.91
SNX6-209ENST00000557265 FHOD3Q2V2M9 1422 aa20.73■□□□□ 0.91
SNX6-209ENST00000557265 FRMPD1Q5SYB0 1578 aa20.7■□□□□ 0.9
SNX6-209ENST00000557265 DENND4BO75064 1496 aaPredicted RBP20.68■□□□□ 0.9
SNX6-209ENST00000557265 AKNAQ7Z591 1439 aa20.67■□□□□ 0.9
SNX6-209ENST00000557265 BCORL1Q5H9F3 1711 aa20.65■□□□□ 0.9
SNX6-209ENST00000557265 EEA1Q15075 1411 aa20.65■□□□□ 0.9
SNX6-209ENST00000557265 MADDQ8WXG6 1647 aa20.64■□□□□ 0.89
SNX6-209ENST00000557265 FANCAO15360 1455 aa20.63■□□□□ 0.89
SNX6-209ENST00000557265 LMTK3Q96Q04 1460 aa20.62■□□□□ 0.89
SNX6-209ENST00000557265 PLPPR3Q6T4P5 718 aa20.62■□□□□ 0.89
SNX6-209ENST00000557265 PCF11O94913 1555 aaKnown RBP20.62■□□□□ 0.89
SNX6-209ENST00000557265 ARHGEF40Q8TER5 1519 aa20.6■□□□□ 0.89
SNX6-209ENST00000557265 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.59■□□□□ 0.89
SNX6-209ENST00000557265 HSPA2P54652 639 aa20.59■□□□□ 0.89
SNX6-209ENST00000557265 POGZQ7Z3K3 1410 aa20.58■□□□□ 0.88
SNX6-209ENST00000557265 MLECQ14165 292 aa20.57■□□□□ 0.88
SNX6-209ENST00000557265 YEATS2Q9ULM3 1422 aa20.57■□□□□ 0.88
SNX6-209ENST00000557265 RICTORQ6R327 1708 aa20.55■□□□□ 0.88
SNX6-209ENST00000557265 TTC37Q6PGP7 1564 aa20.54■□□□□ 0.88
SNX6-209ENST00000557265 RIMS1Q86UR5 1692 aaKnown RBP20.54■□□□□ 0.88
SNX6-209ENST00000557265 EFCAB5A4FU69 1503 aa20.53■□□□□ 0.88
SNX6-209ENST00000557265 ATP1B4Q9UN42 357 aaPredicted RBP20.53■□□□□ 0.88
SNX6-209ENST00000557265 CFAP74Q9C0B2 1584 aa20.53■□□□□ 0.88
SNX6-209ENST00000557265 CDK13Q14004 1512 aaKnown RBP20.53■□□□□ 0.88
SNX6-209ENST00000557265 ZFYVE16Q7Z3T8 1539 aa20.53■□□□□ 0.88
SNX6-209ENST00000557265 SCAPERQ9BY12 1400 aa20.53■□□□□ 0.88
SNX6-209ENST00000557265 MAGI2Q86UL8 1455 aa20.52■□□□□ 0.88
SNX6-209ENST00000557265 ZMYM4Q5VZL5 1548 aa20.52■□□□□ 0.87
SNX6-209ENST00000557265 PLCH2O75038 1416 aa20.52■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms