RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 RUSC2Q8N2Y8 1516 aa27.59■■■□□ 2.01
TUBB3-213ENST00000557262 KIAA0586Q9BVV6 1533 aa27.54■■■□□ 2
TUBB3-213ENST00000557262 CUL7Q14999 1698 aa27.52■■■□□ 2
TUBB3-213ENST00000557262 CARMIL1Q5VZK9 1371 aa27.5■■□□□ 1.99
TUBB3-213ENST00000557262 NPM1P06748 294 aaKnown RBP eCLIP27.46■■□□□ 1.99
TUBB3-213ENST00000557262 KIF13AQ9H1H9 1805 aa27.34■■□□□ 1.97
TUBB3-213ENST00000557262 ADCY10Q96PN6 1610 aa27.31■■□□□ 1.96
TUBB3-213ENST00000557262 FAM69CQ0P6D2 419 aa27.31■■□□□ 1.96
TUBB3-213ENST00000557262 PTPRGP23470 1445 aa27.3■■□□□ 1.96
TUBB3-213ENST00000557262 CARMIL2Q6F5E8 1435 aa27.28■■□□□ 1.96
TUBB3-213ENST00000557262 MAPKBP1O60336 1514 aa27.27■■□□□ 1.96
TUBB3-213ENST00000557262 ABCC10Q5T3U5 1492 aa27.27■■□□□ 1.96
TUBB3-213ENST00000557262 TTBK1Q5TCY1 1321 aaPredicted RBP27.25■■□□□ 1.95
TUBB3-213ENST00000557262 TNIKQ9UKE5 1360 aa27.24■■□□□ 1.95
TUBB3-213ENST00000557262 RAPGEF2Q9Y4G8 1499 aa27.23■■□□□ 1.95
TUBB3-213ENST00000557262 IQGAP2Q13576 1575 aa27.22■■□□□ 1.95
TUBB3-213ENST00000557262 AEBP2Q6ZN18 517 aaPredicted RBP27.21■■□□□ 1.95
TUBB3-213ENST00000557262 DIP2BQ9P265 1576 aa27.17■■□□□ 1.94
TUBB3-213ENST00000557262 DISP1Q96F81 1524 aa27.11■■□□□ 1.93
TUBB3-213ENST00000557262 ABCC2Q92887 1545 aa27.09■■□□□ 1.93
TUBB3-213ENST00000557262 UGGT2Q9NYU1 1516 aa27.07■■□□□ 1.92
TUBB3-213ENST00000557262 UACAQ9BZF9 1416 aa27.07■■□□□ 1.92
TUBB3-213ENST00000557262 UHRF1BP1LA0JNW5 1464 aa27.06■■□□□ 1.92
TUBB3-213ENST00000557262 PLB1Q6P1J6 1458 aa27■■□□□ 1.91
TUBB3-213ENST00000557262 ASXL2Q76L83 1435 aa27■■□□□ 1.91
TUBB3-213ENST00000557262 TSPOAP1O95153 1857 aa26.98■■□□□ 1.91
TUBB3-213ENST00000557262 KIAA0556O60303 1618 aa26.96■■□□□ 1.91
TUBB3-213ENST00000557262 PRXQ9BXM0 1461 aa26.95■■□□□ 1.91
TUBB3-213ENST00000557262 KDM5BQ9UGL1 1544 aa26.93■■□□□ 1.9
TUBB3-213ENST00000557262 KDM6BO15054 1643 aa26.93■■□□□ 1.9
TUBB3-213ENST00000557262 CTTNBP2Q8WZ74 1663 aa26.9■■□□□ 1.9
TUBB3-213ENST00000557262 GLI2P10070 1586 aa26.9■■□□□ 1.9
TUBB3-213ENST00000557262 GOLGA3Q08378 1498 aa26.89■■□□□ 1.9
TUBB3-213ENST00000557262 CSRNP3Q8WYN3 585 aa26.85■■□□□ 1.89
TUBB3-213ENST00000557262 EPRSP07814 1512 aaKnown RBP26.83■■□□□ 1.89
TUBB3-213ENST00000557262 ZCCHC11Q5TAX3 1644 aaKnown RBP26.83■■□□□ 1.88
TUBB3-213ENST00000557262 PPRC1Q5VV67 1664 aaKnown RBP26.8■■□□□ 1.88
TUBB3-213ENST00000557262 FAM9AQ8IZU1 332 aaPredicted RBP26.79■■□□□ 1.88
TUBB3-213ENST00000557262 ABCA8O94911 1581 aa26.74■■□□□ 1.87
TUBB3-213ENST00000557262 MAP3K4Q9Y6R4 1608 aa26.73■■□□□ 1.87
TUBB3-213ENST00000557262 P3H3Q8IVL6 736 aa26.73■■□□□ 1.87
TUBB3-213ENST00000557262 WDR7Q9Y4E6 1490 aa26.73■■□□□ 1.87
TUBB3-213ENST00000557262 KDM4FA0A1W2PPD8 638 aa26.7■■□□□ 1.86
TUBB3-213ENST00000557262 KCNH8Q96L42 1107 aa26.7■■□□□ 1.86
TUBB3-213ENST00000557262 TEX14Q8IWB6 1497 aa26.69■■□□□ 1.86
TUBB3-213ENST00000557262 EEA1Q15075 1411 aa26.68■■□□□ 1.86
TUBB3-213ENST00000557262 COL17A1Q9UMD9 1497 aaPredicted RBP26.66■■□□□ 1.86
TUBB3-213ENST00000557262 CD109Q6YHK3 1445 aa26.61■■□□□ 1.85
TUBB3-213ENST00000557262 ARID3CA6NKF2 412 aa26.59■■□□□ 1.85
TUBB3-213ENST00000557262 ATP10BO94823 1461 aa26.57■■□□□ 1.84
TUBB3-213ENST00000557262 MAGI3Q5TCQ9 1506 aa26.56■■□□□ 1.84
TUBB3-213ENST00000557262 SAMD9Q5K651 1589 aa26.54■■□□□ 1.84
TUBB3-213ENST00000557262 RANGAP1P46060 587 aaPredicted RBP26.54■■□□□ 1.84
TUBB3-213ENST00000557262 CFAP43Q8NDM7 1665 aa26.54■■□□□ 1.84
TUBB3-213ENST00000557262 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.48■■□□□ 1.83
TUBB3-213ENST00000557262 HNRNPUL2Q1KMD3 747 aaKnown RBP26.48■■□□□ 1.83
TUBB3-213ENST00000557262 ADGRL1O94910 1474 aa26.46■■□□□ 1.83
TUBB3-213ENST00000557262 RAPGEF6Q8TEU7 1601 aa26.45■■□□□ 1.82
TUBB3-213ENST00000557262 FHOD3Q2V2M9 1422 aa26.41■■□□□ 1.82
TUBB3-213ENST00000557262 CHIC1Q5VXU3 224 aa26.41■■□□□ 1.82
TUBB3-213ENST00000557262 KIF21BO75037 1637 aa26.39■■□□□ 1.82
TUBB3-213ENST00000557262 NUP153P49790 1475 aaKnown RBP26.37■■□□□ 1.81
TUBB3-213ENST00000557262 PHLDB1Q86UU1 1377 aa26.36■■□□□ 1.81
TUBB3-213ENST00000557262 PLEKHD1A6NEE1 506 aa26.36■■□□□ 1.81
TUBB3-213ENST00000557262 ABCA9Q8IUA7 1624 aa26.36■■□□□ 1.81
TUBB3-213ENST00000557262 ARAP3Q8WWN8 1544 aa26.35■■□□□ 1.81
TUBB3-213ENST00000557262 UBTFP17480 764 aaKnown RBP26.34■■□□□ 1.81
TUBB3-213ENST00000557262 EFCAB5A4FU69 1503 aa26.32■■□□□ 1.8
TUBB3-213ENST00000557262 EHMT2Q96KQ7 1210 aa26.31■■□□□ 1.8
TUBB3-213ENST00000557262 NEO1Q92859 1461 aa26.26■■□□□ 1.79
TUBB3-213ENST00000557262 RAPGEF3O95398 923 aa26.25■■□□□ 1.79
TUBB3-213ENST00000557262 ATP1B4Q9UN42 357 aaPredicted RBP26.17■■□□□ 1.78
TUBB3-213ENST00000557262 FMN1Q68DA7 1419 aa26.14■■□□□ 1.78
TUBB3-213ENST00000557262 ARHGAP35Q9NRY4 1499 aa26.12■■□□□ 1.77
TUBB3-213ENST00000557262 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.12■■□□□ 1.77
TUBB3-213ENST00000557262 AKNAQ7Z591 1439 aa26.11■■□□□ 1.77
TUBB3-213ENST00000557262 CDK13Q14004 1512 aaKnown RBP26.1■■□□□ 1.77
TUBB3-213ENST00000557262 FANCAO15360 1455 aa26.09■■□□□ 1.77
TUBB3-213ENST00000557262 DENND4BO75064 1496 aaPredicted RBP26.09■■□□□ 1.77
TUBB3-213ENST00000557262 FRMPD1Q5SYB0 1578 aa26.08■■□□□ 1.77
TUBB3-213ENST00000557262 CDK11AQ9UQ88 783 aaPredicted RBP26.08■■□□□ 1.77
TUBB3-213ENST00000557262 HECW2Q9P2P5 1572 aa26.07■■□□□ 1.76
TUBB3-213ENST00000557262 TTC37Q6PGP7 1564 aa26.05■■□□□ 1.76
TUBB3-213ENST00000557262 ARID4BQ4LE39 1312 aaPredicted RBP26.04■■□□□ 1.76
TUBB3-213ENST00000557262 CFAP74Q9C0B2 1584 aa26.03■■□□□ 1.76
TUBB3-213ENST00000557262 HECW1Q76N89 1606 aa26.03■■□□□ 1.76
TUBB3-213ENST00000557262 PLCH2O75038 1416 aa26.02■■□□□ 1.76
TUBB3-213ENST00000557262 RICTORQ6R327 1708 aa25.99■■□□□ 1.75
TUBB3-213ENST00000557262 ADAMTSL3P82987 1691 aa25.99■■□□□ 1.75
TUBB3-213ENST00000557262 EFCAB2Q5VUJ9 269 aa25.97■■□□□ 1.75
TUBB3-213ENST00000557262 ARHGEF40Q8TER5 1519 aa25.95■■□□□ 1.74
TUBB3-213ENST00000557262 SCAPERQ9BY12 1400 aa25.95■■□□□ 1.74
TUBB3-213ENST00000557262 PTPRMP28827 1452 aa25.94■■□□□ 1.74
TUBB3-213ENST00000557262 BCORL1Q5H9F3 1711 aa25.94■■□□□ 1.74
TUBB3-213ENST00000557262 TROQ12816 1431 aaPredicted RBP25.92■■□□□ 1.74
TUBB3-213ENST00000557262 ZMYM4Q5VZL5 1548 aa25.91■■□□□ 1.74
TUBB3-213ENST00000557262 MAGI2Q86UL8 1455 aa25.91■■□□□ 1.74
TUBB3-213ENST00000557262 CLIP1P30622 1438 aa25.88■■□□□ 1.73
TUBB3-213ENST00000557262 YEATS2Q9ULM3 1422 aa25.88■■□□□ 1.73
TUBB3-213ENST00000557262 MADDQ8WXG6 1647 aa25.87■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms