RNA–Protein interactions for RNA: ENST00000557201.5

HNRNPC-230, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-230ENST00000557201 PRG4Q92954 1404 aaPredicted RBP19.02■□□□□ 0.63
HNRNPC-230ENST00000557201 SENP3Q9H4L4 574 aaPredicted RBP18.98■□□□□ 0.63
HNRNPC-230ENST00000557201 RUSC2Q8N2Y8 1516 aa18.98■□□□□ 0.63
HNRNPC-230ENST00000557201 IGF1RP08069 1367 aa18.94■□□□□ 0.62
HNRNPC-230ENST00000557201 KIF27Q86VH2 1401 aa18.89■□□□□ 0.61
HNRNPC-230ENST00000557201 KIF13AQ9H1H9 1805 aa18.89■□□□□ 0.61
HNRNPC-230ENST00000557201 KIAA0586Q9BVV6 1533 aa18.89■□□□□ 0.61
HNRNPC-230ENST00000557201 CUL7Q14999 1698 aa18.85■□□□□ 0.61
HNRNPC-230ENST00000557201 MAPKBP1O60336 1514 aa18.83■□□□□ 0.61
HNRNPC-230ENST00000557201 ADCY10Q96PN6 1610 aa18.83■□□□□ 0.6
HNRNPC-230ENST00000557201 ABCC10Q5T3U5 1492 aa18.83■□□□□ 0.6
HNRNPC-230ENST00000557201 CARMIL1Q5VZK9 1371 aa18.78■□□□□ 0.6
HNRNPC-230ENST00000557201 FAM69CQ0P6D2 419 aa18.77■□□□□ 0.6
HNRNPC-230ENST00000557201 DIP2BQ9P265 1576 aa18.77■□□□□ 0.59
HNRNPC-230ENST00000557201 NPM1P06748 294 aaKnown RBP eCLIP18.76■□□□□ 0.59
HNRNPC-230ENST00000557201 PTPRGP23470 1445 aa18.7■□□□□ 0.58
HNRNPC-230ENST00000557201 TNIKQ9UKE5 1360 aa18.68■□□□□ 0.58
HNRNPC-230ENST00000557201 IQGAP2Q13576 1575 aa18.66■□□□□ 0.58
HNRNPC-230ENST00000557201 CARMIL2Q6F5E8 1435 aa18.65■□□□□ 0.58
HNRNPC-230ENST00000557201 ABCC2Q92887 1545 aa18.63■□□□□ 0.57
HNRNPC-230ENST00000557201 DISP1Q96F81 1524 aa18.63■□□□□ 0.57
HNRNPC-230ENST00000557201 UHRF1BP1LA0JNW5 1464 aa18.61■□□□□ 0.57
HNRNPC-230ENST00000557201 RAPGEF2Q9Y4G8 1499 aa18.59■□□□□ 0.57
HNRNPC-230ENST00000557201 UGGT2Q9NYU1 1516 aa18.58■□□□□ 0.57
HNRNPC-230ENST00000557201 ASXL2Q76L83 1435 aa18.58■□□□□ 0.56
HNRNPC-230ENST00000557201 UACAQ9BZF9 1416 aa18.58■□□□□ 0.56
HNRNPC-230ENST00000557201 KDM6BO15054 1643 aa18.57■□□□□ 0.56
HNRNPC-230ENST00000557201 TTBK1Q5TCY1 1321 aaPredicted RBP18.57■□□□□ 0.56
HNRNPC-230ENST00000557201 PLB1Q6P1J6 1458 aa18.56■□□□□ 0.56
HNRNPC-230ENST00000557201 TSPOAP1O95153 1857 aa18.56■□□□□ 0.56
HNRNPC-230ENST00000557201 GLI2P10070 1586 aa18.56■□□□□ 0.56
HNRNPC-230ENST00000557201 KDM5BQ9UGL1 1544 aa18.53■□□□□ 0.56
HNRNPC-230ENST00000557201 PPRC1Q5VV67 1664 aaKnown RBP18.52■□□□□ 0.56
HNRNPC-230ENST00000557201 KIAA0556O60303 1618 aa18.5■□□□□ 0.55
HNRNPC-230ENST00000557201 KDM4FA0A1W2PPD8 638 aa18.5■□□□□ 0.55
HNRNPC-230ENST00000557201 EPRSP07814 1512 aaKnown RBP18.47■□□□□ 0.55
HNRNPC-230ENST00000557201 ZCCHC11Q5TAX3 1644 aaKnown RBP18.45■□□□□ 0.54
HNRNPC-230ENST00000557201 MAP3K4Q9Y6R4 1608 aa18.43■□□□□ 0.54
HNRNPC-230ENST00000557201 COL17A1Q9UMD9 1497 aaPredicted RBP18.43■□□□□ 0.54
HNRNPC-230ENST00000557201 PRXQ9BXM0 1461 aa18.42■□□□□ 0.54
HNRNPC-230ENST00000557201 CTTNBP2Q8WZ74 1663 aa18.41■□□□□ 0.54
HNRNPC-230ENST00000557201 WDR7Q9Y4E6 1490 aa18.38■□□□□ 0.53
HNRNPC-230ENST00000557201 GOLGA3Q08378 1498 aa18.37■□□□□ 0.53
HNRNPC-230ENST00000557201 ABCA8O94911 1581 aa18.37■□□□□ 0.53
HNRNPC-230ENST00000557201 TEX14Q8IWB6 1497 aa18.36■□□□□ 0.53
HNRNPC-230ENST00000557201 ADGRL1O94910 1474 aa18.29■□□□□ 0.52
HNRNPC-230ENST00000557201 MAGI3Q5TCQ9 1506 aa18.29■□□□□ 0.52
HNRNPC-230ENST00000557201 CD109Q6YHK3 1445 aa18.26■□□□□ 0.51
HNRNPC-230ENST00000557201 CFAP43Q8NDM7 1665 aa18.26■□□□□ 0.51
HNRNPC-230ENST00000557201 KCNH8Q96L42 1107 aa18.23■□□□□ 0.51
HNRNPC-230ENST00000557201 ATP10BO94823 1461 aa18.22■□□□□ 0.51
HNRNPC-230ENST00000557201 CSRNP3Q8WYN3 585 aa18.21■□□□□ 0.51
HNRNPC-230ENST00000557201 SAMD9Q5K651 1589 aa18.2■□□□□ 0.5
HNRNPC-230ENST00000557201 P3H3Q8IVL6 736 aa18.18■□□□□ 0.5
HNRNPC-230ENST00000557201 ARAP3Q8WWN8 1544 aa18.15■□□□□ 0.5
HNRNPC-230ENST00000557201 ARID3CA6NKF2 412 aa18.14■□□□□ 0.49
HNRNPC-230ENST00000557201 ABCA9Q8IUA7 1624 aa18.12■□□□□ 0.49
HNRNPC-230ENST00000557201 EEA1Q15075 1411 aa18.11■□□□□ 0.49
HNRNPC-230ENST00000557201 FAM9AQ8IZU1 332 aaPredicted RBP18.11■□□□□ 0.49
HNRNPC-230ENST00000557201 RAPGEF6Q8TEU7 1601 aa18.11■□□□□ 0.49
HNRNPC-230ENST00000557201 PHLDB1Q86UU1 1377 aa18.09■□□□□ 0.49
HNRNPC-230ENST00000557201 NUP153P49790 1475 aaKnown RBP18.08■□□□□ 0.49
HNRNPC-230ENST00000557201 HECW2Q9P2P5 1572 aa18.07■□□□□ 0.48
HNRNPC-230ENST00000557201 KIF21BO75037 1637 aa18.05■□□□□ 0.48
HNRNPC-230ENST00000557201 FHOD3Q2V2M9 1422 aa18.05■□□□□ 0.48
HNRNPC-230ENST00000557201 NEO1Q92859 1461 aa18.04■□□□□ 0.48
HNRNPC-230ENST00000557201 FRMPD1Q5SYB0 1578 aa18■□□□□ 0.47
HNRNPC-230ENST00000557201 RAPGEF3O95398 923 aa18■□□□□ 0.47
HNRNPC-230ENST00000557201 ILDR1Q86SU0 546 aaPredicted RBP17.99■□□□□ 0.47
HNRNPC-230ENST00000557201 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.98■□□□□ 0.47
HNRNPC-230ENST00000557201 HNRNPUL2Q1KMD3 747 aaKnown RBP17.98■□□□□ 0.47
HNRNPC-230ENST00000557201 EFCAB5A4FU69 1503 aa17.97■□□□□ 0.47
HNRNPC-230ENST00000557201 RANGAP1P46060 587 aaPredicted RBP17.97■□□□□ 0.47
HNRNPC-230ENST00000557201 ADAMTSL3P82987 1691 aa17.96■□□□□ 0.47
HNRNPC-230ENST00000557201 PLEKHD1A6NEE1 506 aa17.94■□□□□ 0.46
HNRNPC-230ENST00000557201 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.93■□□□□ 0.461e-13■■■□□ 15.2
HNRNPC-230ENST00000557201 PTPRMP28827 1452 aa17.92■□□□□ 0.46
HNRNPC-230ENST00000557201 PLPPR3Q6T4P5 718 aa17.91■□□□□ 0.46
HNRNPC-230ENST00000557201 AKNAQ7Z591 1439 aa17.9■□□□□ 0.46
HNRNPC-230ENST00000557201 RICTORQ6R327 1708 aa17.9■□□□□ 0.46
HNRNPC-230ENST00000557201 FANCAO15360 1455 aa17.89■□□□□ 0.45
HNRNPC-230ENST00000557201 DENND4BO75064 1496 aaPredicted RBP17.89■□□□□ 0.45
HNRNPC-230ENST00000557201 BCORL1Q5H9F3 1711 aa17.89■□□□□ 0.45
HNRNPC-230ENST00000557201 TTC37Q6PGP7 1564 aa17.89■□□□□ 0.45
HNRNPC-230ENST00000557201 CDK13Q14004 1512 aaKnown RBP17.88■□□□□ 0.45
HNRNPC-230ENST00000557201 ARHGEF40Q8TER5 1519 aa17.88■□□□□ 0.45
HNRNPC-230ENST00000557201 CFAP74Q9C0B2 1584 aa17.86■□□□□ 0.45
HNRNPC-230ENST00000557201 MADDQ8WXG6 1647 aa17.85■□□□□ 0.45
HNRNPC-230ENST00000557201 ZMYM4Q5VZL5 1548 aa17.85■□□□□ 0.45
HNRNPC-230ENST00000557201 ARHGAP35Q9NRY4 1499 aa17.83■□□□□ 0.44
HNRNPC-230ENST00000557201 PLCH2O75038 1416 aa17.82■□□□□ 0.44
HNRNPC-230ENST00000557201 ARID4BQ4LE39 1312 aaPredicted RBP17.81■□□□□ 0.44
HNRNPC-230ENST00000557201 FMN1Q68DA7 1419 aa17.8■□□□□ 0.44
HNRNPC-230ENST00000557201 YEATS2Q9ULM3 1422 aa17.8■□□□□ 0.44
HNRNPC-230ENST00000557201 UBTFP17480 764 aaKnown RBP17.79■□□□□ 0.44
HNRNPC-230ENST00000557201 MAGI2Q86UL8 1455 aa17.79■□□□□ 0.44
HNRNPC-230ENST00000557201 SIGLEC1Q9BZZ2 1709 aa17.79■□□□□ 0.44
HNRNPC-230ENST00000557201 ZFYVE16Q7Z3T8 1539 aa17.78■□□□□ 0.44
HNRNPC-230ENST00000557201 HECW1Q76N89 1606 aa17.77■□□□□ 0.44
HNRNPC-230ENST00000557201 POGZQ7Z3K3 1410 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms