RNA–Protein interactions for RNA: ENST00000556618.1

RCCD1-206, Transcript of RCC1 domain containing 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene RCCD1, Length 1,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-206ENST00000556618 CTTNBP2Q8WZ74 1663 aa39.57■■■■□ 3.92
RCCD1-206ENST00000556618 SHROOM2Q13796 1616 aa39.56■■■■□ 3.92
RCCD1-206ENST00000556618 JPH4Q96JJ6 628 aa39.55■■■■□ 3.92
RCCD1-206ENST00000556618 IQGAP2Q13576 1575 aa39.52■■■■□ 3.92
RCCD1-206ENST00000556618 GOLGA3Q08378 1498 aa39.5■■■■□ 3.91
RCCD1-206ENST00000556618 ARHGEF11O15085 1522 aa39.5■■■■□ 3.91
RCCD1-206ENST00000556618 EHMT2Q96KQ7 1210 aa39.48■■■■□ 3.91
RCCD1-206ENST00000556618 RIMBP3CA6NJZ7 1639 aa39.47■■■■□ 3.91
RCCD1-206ENST00000556618 RIMBP3BA6NNM3 1639 aa39.47■■■■□ 3.91
RCCD1-206ENST00000556618 RIMBP3Q9UFD9 1639 aa39.47■■■■□ 3.91
RCCD1-206ENST00000556618 PRG4Q92954 1404 aaPredicted RBP39.4■■■■□ 3.9
RCCD1-206ENST00000556618 ERCC6L2Q5T890 1561 aa39.38■■■■□ 3.89
RCCD1-206ENST00000556618 UBTFP17480 764 aaKnown RBP39.38■■■■□ 3.89
RCCD1-206ENST00000556618 UGGT2Q9NYU1 1516 aa39.33■■■■□ 3.89
RCCD1-206ENST00000556618 CARMIL2Q6F5E8 1435 aa39.22■■■■□ 3.87
RCCD1-206ENST00000556618 DISP1Q96F81 1524 aa39.22■■■■□ 3.87
RCCD1-206ENST00000556618 ARAP1Q96P48 1450 aa39.22■■■■□ 3.87
RCCD1-206ENST00000556618 KIAA0556O60303 1618 aa39.14■■■■□ 3.86
RCCD1-206ENST00000556618 CYB5RLQ6IPT4 315 aa39.13■■■■□ 3.85
RCCD1-206ENST00000556618 LOC105371045A0A1W2PR82 267 aa39.12■■■■□ 3.85
RCCD1-206ENST00000556618 RANGAP1P46060 587 aaPredicted RBP39.12■■■■□ 3.85
RCCD1-206ENST00000556618 TNIKQ9UKE5 1360 aa39.11■■■■□ 3.85
RCCD1-206ENST00000556618 SAMD9Q5K651 1589 aa39.06■■■■□ 3.84
RCCD1-206ENST00000556618 PTPRGP23470 1445 aa39■■■■□ 3.83
RCCD1-206ENST00000556618 P3H3Q8IVL6 736 aa38.99■■■■□ 3.83
RCCD1-206ENST00000556618 EFCAB5A4FU69 1503 aa38.97■■■■□ 3.83
RCCD1-206ENST00000556618 TTBK1Q5TCY1 1321 aaPredicted RBP38.96■■■■□ 3.83
RCCD1-206ENST00000556618 ARHGAP35Q9NRY4 1499 aa38.88■■■■□ 3.81
RCCD1-206ENST00000556618 FHOD3Q2V2M9 1422 aa38.85■■■■□ 3.81
RCCD1-206ENST00000556618 CLIP1P30622 1438 aa38.81■■■■□ 3.8
RCCD1-206ENST00000556618 CEP162Q5TB80 1403 aa38.77■■■■□ 3.8
RCCD1-206ENST00000556618 UACAQ9BZF9 1416 aa38.75■■■■□ 3.79
RCCD1-206ENST00000556618 ADCY10Q96PN6 1610 aa38.75■■■■□ 3.79
RCCD1-206ENST00000556618 PLB1Q6P1J6 1458 aa38.71■■■■□ 3.79
RCCD1-206ENST00000556618 ABCA8O94911 1581 aa38.69■■■■□ 3.78
RCCD1-206ENST00000556618 UHRF1BP1LA0JNW5 1464 aa38.69■■■■□ 3.78
RCCD1-206ENST00000556618 ABCC2Q92887 1545 aa38.67■■■■□ 3.78
RCCD1-206ENST00000556618 FMN1Q68DA7 1419 aa38.61■■■■□ 3.77
RCCD1-206ENST00000556618 RAPGEF6Q8TEU7 1601 aa38.59■■■■□ 3.77
RCCD1-206ENST00000556618 NPM1P06748 294 aaKnown RBP eCLIP38.56■■■■□ 3.76
RCCD1-206ENST00000556618 KDM5BQ9UGL1 1544 aa38.5■■■■□ 3.75
RCCD1-206ENST00000556618 ZCCHC11Q5TAX3 1644 aaKnown RBP38.45■■■■□ 3.75
RCCD1-206ENST00000556618 NUP153P49790 1475 aaKnown RBP38.44■■■■□ 3.74
RCCD1-206ENST00000556618 ARID3CA6NKF2 412 aa38.4■■■■□ 3.74
RCCD1-206ENST00000556618 MAPKBP1O60336 1514 aa38.38■■■■□ 3.73
RCCD1-206ENST00000556618 ATP10BO94823 1461 aa38.38■■■■□ 3.73
RCCD1-206ENST00000556618 CASKIN1Q8WXD9 1431 aa38.37■■■■□ 3.73
RCCD1-206ENST00000556618 PCF11O94913 1555 aaKnown RBP38.37■■■■□ 3.73
RCCD1-206ENST00000556618 HECW1Q76N89 1606 aa38.36■■■■□ 3.73
RCCD1-206ENST00000556618 ATP1B4Q9UN42 357 aaPredicted RBP38.36■■■■□ 3.73
RCCD1-206ENST00000556618 FYCO1Q9BQS8 1478 aa38.3■■■■□ 3.72
RCCD1-206ENST00000556618 ASXL2Q76L83 1435 aa38.29■■■■□ 3.72
RCCD1-206ENST00000556618 LRRIQ1Q96JM4 1722 aa38.27■■■■□ 3.72
RCCD1-206ENST00000556618 EPRSP07814 1512 aaKnown RBP38.27■■■■□ 3.72
RCCD1-206ENST00000556618 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP38.26■■■■□ 3.72
RCCD1-206ENST00000556618 HNRNPUL2Q1KMD3 747 aaKnown RBP38.26■■■■□ 3.72
RCCD1-206ENST00000556618 VPS8Q8N3P4 1428 aa38.26■■■■□ 3.72
RCCD1-206ENST00000556618 CDK13Q14004 1512 aaKnown RBP38.23■■■■□ 3.71
RCCD1-206ENST00000556618 WDR7Q9Y4E6 1490 aa38.16■■■■□ 3.7
RCCD1-206ENST00000556618 CCDC18Q5T9S5 1454 aa38.15■■■■□ 3.7
RCCD1-206ENST00000556618 TRHP20396 242 aaPredicted RBP38.14■■■■□ 3.7
RCCD1-206ENST00000556618 ABCC10Q5T3U5 1492 aa38.14■■■■□ 3.7
RCCD1-206ENST00000556618 KIF13AQ9H1H9 1805 aa38.11■■■■□ 3.69
RCCD1-206ENST00000556618 PLEKHD1A6NEE1 506 aa38.1■■■■□ 3.69
RCCD1-206ENST00000556618 DIP2BQ9P265 1576 aa38.09■■■■□ 3.69
RCCD1-206ENST00000556618 FAM69CQ0P6D2 419 aa38.06■■■■□ 3.68
RCCD1-206ENST00000556618 KCNH8Q96L42 1107 aa38.06■■■■□ 3.68
RCCD1-206ENST00000556618 CDK11AQ9UQ88 783 aaPredicted RBP38.06■■■■□ 3.68
RCCD1-206ENST00000556618 GLI2P10070 1586 aa38■■■■□ 3.67
RCCD1-206ENST00000556618 TROQ12816 1431 aaPredicted RBP37.93■■■■□ 3.66
RCCD1-206ENST00000556618 MAGI3Q5TCQ9 1506 aa37.93■■■■□ 3.66
RCCD1-206ENST00000556618 CFAP43Q8NDM7 1665 aa37.93■■■■□ 3.66
RCCD1-206ENST00000556618 TIAM1Q13009 1591 aa37.9■■■■□ 3.66
RCCD1-206ENST00000556618 MAP3K1Q13233 1512 aa37.87■■■■□ 3.65
RCCD1-206ENST00000556618 MAP3K4Q9Y6R4 1608 aa37.86■■■■□ 3.65
RCCD1-206ENST00000556618 ABCA9Q8IUA7 1624 aa37.84■■■■□ 3.65
RCCD1-206ENST00000556618 TSPOAP1O95153 1857 aa37.83■■■■□ 3.65
RCCD1-206ENST00000556618 APLP2Q06481 763 aa37.82■■■■□ 3.65
RCCD1-206ENST00000556618 MTUS2Q5JR59 1369 aa37.82■■■■□ 3.64
RCCD1-206ENST00000556618 KIF14Q15058 1648 aa37.81■■■■□ 3.64
RCCD1-206ENST00000556618 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP37.8■■■■□ 3.64
RCCD1-206ENST00000556618 CD109Q6YHK3 1445 aa37.77■■■■□ 3.64
RCCD1-206ENST00000556618 EHBP1L1Q8N3D4 1523 aa37.76■■■■□ 3.64
RCCD1-206ENST00000556618 TTC37Q6PGP7 1564 aa37.75■■■■□ 3.63
RCCD1-206ENST00000556618 LRRC9Q6ZRR7 1453 aa37.74■■■■□ 3.63
RCCD1-206ENST00000556618 PPRC1Q5VV67 1664 aaKnown RBP37.73■■■■□ 3.63
RCCD1-206ENST00000556618 KANK4Q5T7N3 995 aaPredicted RBP37.72■■■■□ 3.63
RCCD1-206ENST00000556618 SUPT6HQ7KZ85 1726 aaKnown RBP37.62■■■■□ 3.61
RCCD1-206ENST00000556618 MYO5CQ9NQX4 1742 aa37.62■■■■□ 3.61
RCCD1-206ENST00000556618 TEX14Q8IWB6 1497 aa37.61■■■■□ 3.61
RCCD1-206ENST00000556618 PLCH2O75038 1416 aa37.58■■■■□ 3.61
RCCD1-206ENST00000556618 NCOA2Q15596 1464 aa37.56■■■■□ 3.6
RCCD1-206ENST00000556618 CDC42BPAQ5VT25 1732 aa37.55■■■■□ 3.6
RCCD1-206ENST00000556618 CDC42BPBQ9Y5S2 1711 aa37.52■■■■□ 3.6
RCCD1-206ENST00000556618 ARAP3Q8WWN8 1544 aa37.52■■■■□ 3.6
RCCD1-206ENST00000556618 CCNB3Q8WWL7 1395 aa37.51■■■■□ 3.6
RCCD1-206ENST00000556618 PREX2Q70Z35 1606 aa37.51■■■■□ 3.59
RCCD1-206ENST00000556618 GPATCH8Q9UKJ3 1502 aaKnown RBP37.5■■■■□ 3.59
RCCD1-206ENST00000556618 FANCAO15360 1455 aa37.48■■■■□ 3.59
RCCD1-206ENST00000556618 NEO1Q92859 1461 aa37.46■■■■□ 3.59
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms