RNA–Protein interactions for RNA: ENST00000556571.1

ACTN1-221, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 568 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-221ENST00000556571 FAM69CQ0P6D2 419 aa21.1■□□□□ 0.97
ACTN1-221ENST00000556571 KIF13AQ9H1H9 1805 aa21.07■□□□□ 0.96
ACTN1-221ENST00000556571 ABCC10Q5T3U5 1492 aa21.06■□□□□ 0.96
ACTN1-221ENST00000556571 RUSC2Q8N2Y8 1516 aa21.05■□□□□ 0.96
ACTN1-221ENST00000556571 IGF1RP08069 1367 aa21.01■□□□□ 0.95
ACTN1-221ENST00000556571 MAPKBP1O60336 1514 aa21.01■□□□□ 0.95
ACTN1-221ENST00000556571 KIAA0586Q9BVV6 1533 aa21■□□□□ 0.95
ACTN1-221ENST00000556571 KIF27Q86VH2 1401 aa20.96■□□□□ 0.95
ACTN1-221ENST00000556571 ADCY10Q96PN6 1610 aa20.95■□□□□ 0.94
ACTN1-221ENST00000556571 DIP2BQ9P265 1576 aa20.93■□□□□ 0.94
ACTN1-221ENST00000556571 PTPRGP23470 1445 aa20.89■□□□□ 0.94
ACTN1-221ENST00000556571 CUL7Q14999 1698 aa20.88■□□□□ 0.93
ACTN1-221ENST00000556571 CARMIL1Q5VZK9 1371 aa20.85■□□□□ 0.93
ACTN1-221ENST00000556571 KDM6BO15054 1643 aa20.83■□□□□ 0.93
ACTN1-221ENST00000556571 CARMIL2Q6F5E8 1435 aa20.83■□□□□ 0.93
ACTN1-221ENST00000556571 TNIKQ9UKE5 1360 aa20.83■□□□□ 0.92
ACTN1-221ENST00000556571 TTBK1Q5TCY1 1321 aaPredicted RBP20.82■□□□□ 0.92
ACTN1-221ENST00000556571 KDM4FA0A1W2PPD8 638 aa20.82■□□□□ 0.92
ACTN1-221ENST00000556571 ABCC2Q92887 1545 aa20.78■□□□□ 0.92
ACTN1-221ENST00000556571 TSPOAP1O95153 1857 aa20.76■□□□□ 0.91
ACTN1-221ENST00000556571 PLB1Q6P1J6 1458 aa20.75■□□□□ 0.91
ACTN1-221ENST00000556571 ASXL2Q76L83 1435 aa20.74■□□□□ 0.91
ACTN1-221ENST00000556571 UHRF1BP1LA0JNW5 1464 aa20.72■□□□□ 0.91
ACTN1-221ENST00000556571 IQGAP2Q13576 1575 aa20.71■□□□□ 0.91
ACTN1-221ENST00000556571 UACAQ9BZF9 1416 aa20.7■□□□□ 0.9
ACTN1-221ENST00000556571 GLI2P10070 1586 aa20.68■□□□□ 0.9
ACTN1-221ENST00000556571 DISP1Q96F81 1524 aa20.65■□□□□ 0.9
ACTN1-221ENST00000556571 KDM5BQ9UGL1 1544 aa20.62■□□□□ 0.89
ACTN1-221ENST00000556571 RAPGEF2Q9Y4G8 1499 aa20.61■□□□□ 0.89
ACTN1-221ENST00000556571 EPRSP07814 1512 aaKnown RBP20.6■□□□□ 0.89
ACTN1-221ENST00000556571 PPRC1Q5VV67 1664 aaKnown RBP20.6■□□□□ 0.89
ACTN1-221ENST00000556571 UGGT2Q9NYU1 1516 aa20.59■□□□□ 0.89
ACTN1-221ENST00000556571 COL17A1Q9UMD9 1497 aaPredicted RBP20.56■□□□□ 0.88
ACTN1-221ENST00000556571 TEX14Q8IWB6 1497 aa20.56■□□□□ 0.88
ACTN1-221ENST00000556571 ADGRL1O94910 1474 aa20.55■□□□□ 0.88
ACTN1-221ENST00000556571 MAP3K4Q9Y6R4 1608 aa20.52■□□□□ 0.88
ACTN1-221ENST00000556571 KIAA0556O60303 1618 aa20.51■□□□□ 0.87
ACTN1-221ENST00000556571 ZCCHC11Q5TAX3 1644 aaKnown RBP20.49■□□□□ 0.87
ACTN1-221ENST00000556571 WDR7Q9Y4E6 1490 aa20.48■□□□□ 0.87
ACTN1-221ENST00000556571 ILDR1Q86SU0 546 aaPredicted RBP20.47■□□□□ 0.87
ACTN1-221ENST00000556571 GOLGA3Q08378 1498 aa20.43■□□□□ 0.86
ACTN1-221ENST00000556571 KCNH8Q96L42 1107 aa20.42■□□□□ 0.86
ACTN1-221ENST00000556571 CD109Q6YHK3 1445 aa20.42■□□□□ 0.86
ACTN1-221ENST00000556571 MAGI3Q5TCQ9 1506 aa20.4■□□□□ 0.86
ACTN1-221ENST00000556571 FAM9AQ8IZU1 332 aaPredicted RBP20.37■□□□□ 0.85
ACTN1-221ENST00000556571 ABCA8O94911 1581 aa20.36■□□□□ 0.85
ACTN1-221ENST00000556571 CTTNBP2Q8WZ74 1663 aa20.34■□□□□ 0.85
ACTN1-221ENST00000556571 PRXQ9BXM0 1461 aa20.33■□□□□ 0.85
ACTN1-221ENST00000556571 CFAP43Q8NDM7 1665 aa20.32■□□□□ 0.84
ACTN1-221ENST00000556571 HECW2Q9P2P5 1572 aa20.32■□□□□ 0.84
ACTN1-221ENST00000556571 ARID3CA6NKF2 412 aa20.25■□□□□ 0.83
ACTN1-221ENST00000556571 P3H3Q8IVL6 736 aa20.25■□□□□ 0.83
ACTN1-221ENST00000556571 ARAP3Q8WWN8 1544 aa20.25■□□□□ 0.83
ACTN1-221ENST00000556571 ATP10BO94823 1461 aa20.24■□□□□ 0.83
ACTN1-221ENST00000556571 PHLDB1Q86UU1 1377 aa20.23■□□□□ 0.83
ACTN1-221ENST00000556571 CSRNP3Q8WYN3 585 aa20.16■□□□□ 0.82
ACTN1-221ENST00000556571 KIF21BO75037 1637 aa20.16■□□□□ 0.82
ACTN1-221ENST00000556571 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.15■□□□□ 0.82
ACTN1-221ENST00000556571 HNRNPUL2Q1KMD3 747 aaKnown RBP20.15■□□□□ 0.82
ACTN1-221ENST00000556571 RAPGEF3O95398 923 aa20.14■□□□□ 0.81
ACTN1-221ENST00000556571 ABCA9Q8IUA7 1624 aa20.13■□□□□ 0.81
ACTN1-221ENST00000556571 NEO1Q92859 1461 aa20.12■□□□□ 0.81
ACTN1-221ENST00000556571 PTPRMP28827 1452 aa20.09■□□□□ 0.81
ACTN1-221ENST00000556571 SAMD9Q5K651 1589 aa20.08■□□□□ 0.81
ACTN1-221ENST00000556571 RAPGEF6Q8TEU7 1601 aa20.07■□□□□ 0.8
ACTN1-221ENST00000556571 ARID4BQ4LE39 1312 aaPredicted RBP20.06■□□□□ 0.8
ACTN1-221ENST00000556571 PLEKHD1A6NEE1 506 aa20.05■□□□□ 0.8
ACTN1-221ENST00000556571 FBXO41Q8TF61 875 aa20.05■□□□□ 0.8
ACTN1-221ENST00000556571 ADAMTSL3P82987 1691 aa20.05■□□□□ 0.8
ACTN1-221ENST00000556571 NUP153P49790 1475 aaKnown RBP20.04■□□□□ 0.8
ACTN1-221ENST00000556571 RANGAP1P46060 587 aaPredicted RBP20.02■□□□□ 0.8
ACTN1-221ENST00000556571 EEA1Q15075 1411 aa19.99■□□□□ 0.79
ACTN1-221ENST00000556571 FHOD3Q2V2M9 1422 aa19.99■□□□□ 0.79
ACTN1-221ENST00000556571 DENND4BO75064 1496 aaPredicted RBP19.99■□□□□ 0.79
ACTN1-221ENST00000556571 FRMPD1Q5SYB0 1578 aa19.98■□□□□ 0.79
ACTN1-221ENST00000556571 BCORL1Q5H9F3 1711 aa19.96■□□□□ 0.79
ACTN1-221ENST00000556571 AKNAQ7Z591 1439 aa19.96■□□□□ 0.79
ACTN1-221ENST00000556571 FANCAO15360 1455 aa19.93■□□□□ 0.78
ACTN1-221ENST00000556571 MADDQ8WXG6 1647 aa19.93■□□□□ 0.78
ACTN1-221ENST00000556571 PCF11O94913 1555 aaKnown RBP19.92■□□□□ 0.78
ACTN1-221ENST00000556571 LMTK3Q96Q04 1460 aa19.91■□□□□ 0.78
ACTN1-221ENST00000556571 ARHGEF40Q8TER5 1519 aa19.91■□□□□ 0.78
ACTN1-221ENST00000556571 POGZQ7Z3K3 1410 aa19.9■□□□□ 0.78
ACTN1-221ENST00000556571 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.89■□□□□ 0.77
ACTN1-221ENST00000556571 CFAP74Q9C0B2 1584 aa19.87■□□□□ 0.77
ACTN1-221ENST00000556571 RICTORQ6R327 1708 aa19.87■□□□□ 0.77
ACTN1-221ENST00000556571 EFCAB5A4FU69 1503 aa19.86■□□□□ 0.77
ACTN1-221ENST00000556571 MAGI2Q86UL8 1455 aa19.86■□□□□ 0.77
ACTN1-221ENST00000556571 ZMYM4Q5VZL5 1548 aa19.84■□□□□ 0.77
ACTN1-221ENST00000556571 RIMS1Q86UR5 1692 aaKnown RBP19.84■□□□□ 0.77
ACTN1-221ENST00000556571 YEATS2Q9ULM3 1422 aa19.84■□□□□ 0.77
ACTN1-221ENST00000556571 ZFYVE16Q7Z3T8 1539 aa19.83■□□□□ 0.77
ACTN1-221ENST00000556571 HSPA2P54652 639 aa19.83■□□□□ 0.77
ACTN1-221ENST00000556571 PLPPR3Q6T4P5 718 aa19.83■□□□□ 0.77
ACTN1-221ENST00000556571 TTC37Q6PGP7 1564 aa19.83■□□□□ 0.76
ACTN1-221ENST00000556571 PLCH2O75038 1416 aa19.82■□□□□ 0.76
ACTN1-221ENST00000556571 MLECQ14165 292 aa19.81■□□□□ 0.76
ACTN1-221ENST00000556571 SCAPERQ9BY12 1400 aa19.81■□□□□ 0.76
ACTN1-221ENST00000556571 EFCAB2Q5VUJ9 269 aa19.79■□□□□ 0.76
ACTN1-221ENST00000556571 CDK13Q14004 1512 aaKnown RBP19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms