RNA–Protein interactions for RNA: ENST00000556536.5

TUBB3-211, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 925 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-211ENST00000556536 GRIN2AQ12879 1464 aa28.71■■■□□ 2.19
TUBB3-211ENST00000556536 RAPGEF2Q9Y4G8 1499 aa28.7■■■□□ 2.18
TUBB3-211ENST00000556536 CLASP1Q7Z460 1538 aa28.6■■■□□ 2.17
TUBB3-211ENST00000556536 EHMT2Q96KQ7 1210 aa28.6■■■□□ 2.17
TUBB3-211ENST00000556536 KIF21BO75037 1637 aa28.58■■■□□ 2.17
TUBB3-211ENST00000556536 NUP160Q12769 1436 aa28.56■■■□□ 2.16
TUBB3-211ENST00000556536 CEP170Q5SW79 1584 aa28.54■■■□□ 2.16
TUBB3-211ENST00000556536 GOLGA3Q08378 1498 aa28.51■■■□□ 2.15
TUBB3-211ENST00000556536 LOC105371045A0A1W2PR82 267 aa28.42■■■□□ 2.14
TUBB3-211ENST00000556536 UBTFP17480 764 aaKnown RBP28.42■■■□□ 2.14
TUBB3-211ENST00000556536 KIAA0586Q9BVV6 1533 aa28.42■■■□□ 2.14
TUBB3-211ENST00000556536 AEBP2Q6ZN18 517 aaPredicted RBP28.38■■■□□ 2.13
TUBB3-211ENST00000556536 JPH4Q96JJ6 628 aa28.31■■■□□ 2.12
TUBB3-211ENST00000556536 IQGAP2Q13576 1575 aa28.31■■■□□ 2.12
TUBB3-211ENST00000556536 CTTNBP2Q8WZ74 1663 aa28.29■■■□□ 2.12
TUBB3-211ENST00000556536 TNIKQ9UKE5 1360 aa28.26■■■□□ 2.12
TUBB3-211ENST00000556536 SHROOM2Q13796 1616 aa28.23■■■□□ 2.11
TUBB3-211ENST00000556536 RANGAP1P46060 587 aaPredicted RBP28.22■■■□□ 2.11
TUBB3-211ENST00000556536 PRG4Q92954 1404 aaPredicted RBP28.2■■■□□ 2.11
TUBB3-211ENST00000556536 UGGT2Q9NYU1 1516 aa28.19■■■□□ 2.1
TUBB3-211ENST00000556536 ERCC6L2Q5T890 1561 aa28.15■■■□□ 2.1
TUBB3-211ENST00000556536 DISP1Q96F81 1524 aa28.13■■■□□ 2.09
TUBB3-211ENST00000556536 CARMIL2Q6F5E8 1435 aa28.08■■■□□ 2.09
TUBB3-211ENST00000556536 P3H3Q8IVL6 736 aa28.07■■■□□ 2.08
TUBB3-211ENST00000556536 KIAA0556O60303 1618 aa28.04■■■□□ 2.08
TUBB3-211ENST00000556536 SAMD9Q5K651 1589 aa28.04■■■□□ 2.08
TUBB3-211ENST00000556536 CEP162Q5TB80 1403 aa28.04■■■□□ 2.08
TUBB3-211ENST00000556536 ARHGAP35Q9NRY4 1499 aa28.02■■■□□ 2.08
TUBB3-211ENST00000556536 CLIP1P30622 1438 aa28.02■■■□□ 2.08
TUBB3-211ENST00000556536 EFCAB5A4FU69 1503 aa28■■■□□ 2.07
TUBB3-211ENST00000556536 FHOD3Q2V2M9 1422 aa27.97■■■□□ 2.07
TUBB3-211ENST00000556536 TTBK1Q5TCY1 1321 aaPredicted RBP27.96■■■□□ 2.07
TUBB3-211ENST00000556536 PTPRGP23470 1445 aa27.92■■■□□ 2.06
TUBB3-211ENST00000556536 KIF13AQ9H1H9 1805 aa27.84■■■□□ 2.05
TUBB3-211ENST00000556536 PLB1Q6P1J6 1458 aa27.77■■■□□ 2.04
TUBB3-211ENST00000556536 FMN1Q68DA7 1419 aa27.76■■■□□ 2.04
TUBB3-211ENST00000556536 UACAQ9BZF9 1416 aa27.75■■■□□ 2.03
TUBB3-211ENST00000556536 ABCA8O94911 1581 aa27.72■■■□□ 2.03
TUBB3-211ENST00000556536 ABCC10Q5T3U5 1492 aa27.68■■■□□ 2.02
TUBB3-211ENST00000556536 UHRF1BP1LA0JNW5 1464 aa27.67■■■□□ 2.02
TUBB3-211ENST00000556536 ABCC2Q92887 1545 aa27.67■■■□□ 2.02
TUBB3-211ENST00000556536 ADCY10Q96PN6 1610 aa27.66■■■□□ 2.02
TUBB3-211ENST00000556536 NPM1P06748 294 aaKnown RBP eCLIP27.65■■■□□ 2.02
TUBB3-211ENST00000556536 FAM69CQ0P6D2 419 aa27.65■■■□□ 2.02
TUBB3-211ENST00000556536 RAPGEF6Q8TEU7 1601 aa27.65■■■□□ 2.02
TUBB3-211ENST00000556536 VPS8Q8N3P4 1428 aa27.65■■■□□ 2.02
TUBB3-211ENST00000556536 MAPKBP1O60336 1514 aa27.64■■■□□ 2.02
TUBB3-211ENST00000556536 ATP1B4Q9UN42 357 aaPredicted RBP27.63■■■□□ 2.01
TUBB3-211ENST00000556536 CASKIN1Q8WXD9 1431 aa27.63■■■□□ 2.01
TUBB3-211ENST00000556536 PCF11O94913 1555 aaKnown RBP27.62■■■□□ 2.01
TUBB3-211ENST00000556536 NUP153P49790 1475 aaKnown RBP27.62■■■□□ 2.01
TUBB3-211ENST00000556536 ARID3CA6NKF2 412 aa27.61■■■□□ 2.01
TUBB3-211ENST00000556536 DIP2BQ9P265 1576 aa27.58■■■□□ 2.01
TUBB3-211ENST00000556536 FYCO1Q9BQS8 1478 aa27.57■■■□□ 2
TUBB3-211ENST00000556536 HECW1Q76N89 1606 aa27.54■■■□□ 2
TUBB3-211ENST00000556536 KDM5BQ9UGL1 1544 aa27.54■■■□□ 2
TUBB3-211ENST00000556536 ATP10BO94823 1461 aa27.53■■■□□ 2
TUBB3-211ENST00000556536 EPRSP07814 1512 aaKnown RBP27.5■■□□□ 1.99
TUBB3-211ENST00000556536 KDM6BO15054 1643 aa27.49■■□□□ 1.99
TUBB3-211ENST00000556536 CDK13Q14004 1512 aaKnown RBP27.48■■□□□ 1.99
TUBB3-211ENST00000556536 ZCCHC11Q5TAX3 1644 aaKnown RBP27.46■■□□□ 1.99
TUBB3-211ENST00000556536 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.46■■□□□ 1.99
TUBB3-211ENST00000556536 HNRNPUL2Q1KMD3 747 aaKnown RBP27.46■■□□□ 1.99
TUBB3-211ENST00000556536 LRRIQ1Q96JM4 1722 aa27.42■■□□□ 1.98
TUBB3-211ENST00000556536 CCDC18Q5T9S5 1454 aa27.42■■□□□ 1.98
TUBB3-211ENST00000556536 KDM4FA0A1W2PPD8 638 aa27.41■■□□□ 1.98
TUBB3-211ENST00000556536 ASXL2Q76L83 1435 aa27.38■■□□□ 1.97
TUBB3-211ENST00000556536 TSPOAP1O95153 1857 aa27.36■■□□□ 1.97
TUBB3-211ENST00000556536 PLEKHD1A6NEE1 506 aa27.33■■□□□ 1.97
TUBB3-211ENST00000556536 TIAM1Q13009 1591 aa27.31■■□□□ 1.96
TUBB3-211ENST00000556536 APLP2Q06481 763 aa27.31■■□□□ 1.96
TUBB3-211ENST00000556536 CDK11AQ9UQ88 783 aaPredicted RBP27.31■■□□□ 1.96
TUBB3-211ENST00000556536 WDR7Q9Y4E6 1490 aa27.31■■□□□ 1.96
TUBB3-211ENST00000556536 MAP3K1Q13233 1512 aa27.3■■□□□ 1.96
TUBB3-211ENST00000556536 MAGI3Q5TCQ9 1506 aa27.3■■□□□ 1.96
TUBB3-211ENST00000556536 CFAP43Q8NDM7 1665 aa27.27■■□□□ 1.96
TUBB3-211ENST00000556536 KANK4Q5T7N3 995 aaPredicted RBP27.27■■□□□ 1.96
TUBB3-211ENST00000556536 KCNH8Q96L42 1107 aa27.26■■□□□ 1.95
TUBB3-211ENST00000556536 TROQ12816 1431 aaPredicted RBP27.25■■□□□ 1.95
TUBB3-211ENST00000556536 MTUS2Q5JR59 1369 aa27.22■■□□□ 1.95
TUBB3-211ENST00000556536 LRRC9Q6ZRR7 1453 aa27.22■■□□□ 1.95
TUBB3-211ENST00000556536 GLI2P10070 1586 aa27.18■■□□□ 1.94
TUBB3-211ENST00000556536 EHBP1L1Q8N3D4 1523 aa27.16■■□□□ 1.94
TUBB3-211ENST00000556536 PPARGC1BQ86YN6 1023 aaKnown RBP27.16■■□□□ 1.94
TUBB3-211ENST00000556536 PPRC1Q5VV67 1664 aaKnown RBP27.14■■□□□ 1.94
TUBB3-211ENST00000556536 KIF14Q15058 1648 aa27.13■■□□□ 1.93
TUBB3-211ENST00000556536 ILDR1Q86SU0 546 aaPredicted RBP27.12■■□□□ 1.93
TUBB3-211ENST00000556536 ADGRL1O94910 1474 aa27.09■■□□□ 1.93
TUBB3-211ENST00000556536 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.09■■□□□ 1.93
TUBB3-211ENST00000556536 NCOA2Q15596 1464 aa27.06■■□□□ 1.92
TUBB3-211ENST00000556536 TTC37Q6PGP7 1564 aa27.05■■□□□ 1.92
TUBB3-211ENST00000556536 ABCA9Q8IUA7 1624 aa27.04■■□□□ 1.92
TUBB3-211ENST00000556536 MAP3K4Q9Y6R4 1608 aa27.01■■□□□ 1.92
TUBB3-211ENST00000556536 CD109Q6YHK3 1445 aa27.01■■□□□ 1.91
TUBB3-211ENST00000556536 SUPT6HQ7KZ85 1726 aaKnown RBP27.01■■□□□ 1.91
TUBB3-211ENST00000556536 TEX14Q8IWB6 1497 aa27■■□□□ 1.91
TUBB3-211ENST00000556536 COL17A1Q9UMD9 1497 aaPredicted RBP27■■□□□ 1.91
TUBB3-211ENST00000556536 CCNB3Q8WWL7 1395 aa26.98■■□□□ 1.91
TUBB3-211ENST00000556536 PHLDB1Q86UU1 1377 aa26.96■■□□□ 1.91
TUBB3-211ENST00000556536 GPATCH8Q9UKJ3 1502 aaKnown RBP26.95■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms