RNA–Protein interactions for RNA: ENST00000556162.5

SNX6-206, Transcript of sorting nexin 6, humanhuman

TSL 2

Gene SNX6, Length 1,855 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-206ENST00000556162 KIF21BO75037 1637 aa23.21■■□□□ 1.31
SNX6-206ENST00000556162 EHMT2Q96KQ7 1210 aa23.19■■□□□ 1.3
SNX6-206ENST00000556162 GOLGA3Q08378 1498 aa23.15■■□□□ 1.3
SNX6-206ENST00000556162 UBTFP17480 764 aaKnown RBP23.15■■□□□ 1.3
SNX6-206ENST00000556162 ARHGEF11O15085 1522 aa23.14■■□□□ 1.29
SNX6-206ENST00000556162 IQGAP2Q13576 1575 aa23.14■■□□□ 1.29
SNX6-206ENST00000556162 SHROOM2Q13796 1616 aa23.12■■□□□ 1.29
SNX6-206ENST00000556162 PRG4Q92954 1404 aaPredicted RBP23.11■■□□□ 1.29
SNX6-206ENST00000556162 CTTNBP2Q8WZ74 1663 aa23.1■■□□□ 1.29
SNX6-206ENST00000556162 RIMBP3CA6NJZ7 1639 aa23.09■■□□□ 1.29
SNX6-206ENST00000556162 RIMBP3BA6NNM3 1639 aa23.09■■□□□ 1.29
SNX6-206ENST00000556162 RIMBP3Q9UFD9 1639 aa23.09■■□□□ 1.29
SNX6-206ENST00000556162 ERCC6L2Q5T890 1561 aa23.03■■□□□ 1.28
SNX6-206ENST00000556162 CARMIL2Q6F5E8 1435 aa23.03■■□□□ 1.28
SNX6-206ENST00000556162 UGGT2Q9NYU1 1516 aa23.03■■□□□ 1.28
SNX6-206ENST00000556162 CYB5RLQ6IPT4 315 aa23■■□□□ 1.27
SNX6-206ENST00000556162 RANGAP1P46060 587 aaPredicted RBP22.99■■□□□ 1.27
SNX6-206ENST00000556162 ARAP1Q96P48 1450 aa22.97■■□□□ 1.27
SNX6-206ENST00000556162 DISP1Q96F81 1524 aa22.96■■□□□ 1.27
SNX6-206ENST00000556162 LOC105371045A0A1W2PR82 267 aa22.95■■□□□ 1.26
SNX6-206ENST00000556162 TNIKQ9UKE5 1360 aa22.93■■□□□ 1.26
SNX6-206ENST00000556162 TTBK1Q5TCY1 1321 aaPredicted RBP22.91■■□□□ 1.26
SNX6-206ENST00000556162 KIAA0556O60303 1618 aa22.9■■□□□ 1.26
SNX6-206ENST00000556162 P3H3Q8IVL6 736 aa22.9■■□□□ 1.26
SNX6-206ENST00000556162 PTPRGP23470 1445 aa22.89■■□□□ 1.26
SNX6-206ENST00000556162 SAMD9Q5K651 1589 aa22.84■■□□□ 1.25
SNX6-206ENST00000556162 EFCAB5A4FU69 1503 aa22.82■■□□□ 1.24
SNX6-206ENST00000556162 FHOD3Q2V2M9 1422 aa22.77■■□□□ 1.24
SNX6-206ENST00000556162 ARHGAP35Q9NRY4 1499 aa22.77■■□□□ 1.23
SNX6-206ENST00000556162 CLIP1P30622 1438 aa22.75■■□□□ 1.23
SNX6-206ENST00000556162 UACAQ9BZF9 1416 aa22.73■■□□□ 1.23
SNX6-206ENST00000556162 CEP162Q5TB80 1403 aa22.71■■□□□ 1.23
SNX6-206ENST00000556162 NPM1P06748 294 aaKnown RBP eCLIP22.7■■□□□ 1.22
SNX6-206ENST00000556162 PLB1Q6P1J6 1458 aa22.68■■□□□ 1.22
SNX6-206ENST00000556162 UHRF1BP1LA0JNW5 1464 aa22.67■■□□□ 1.22
SNX6-206ENST00000556162 ADCY10Q96PN6 1610 aa22.66■■□□□ 1.22
SNX6-206ENST00000556162 FMN1Q68DA7 1419 aa22.65■■□□□ 1.22
SNX6-206ENST00000556162 ABCC2Q92887 1545 aa22.65■■□□□ 1.22
SNX6-206ENST00000556162 ABCA8O94911 1581 aa22.64■■□□□ 1.21
SNX6-206ENST00000556162 RAPGEF6Q8TEU7 1601 aa22.57■■□□□ 1.2
SNX6-206ENST00000556162 ATP1B4Q9UN42 357 aaPredicted RBP22.57■■□□□ 1.2
SNX6-206ENST00000556162 KDM5BQ9UGL1 1544 aa22.55■■□□□ 1.2
SNX6-206ENST00000556162 ARID3CA6NKF2 412 aa22.55■■□□□ 1.2
SNX6-206ENST00000556162 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.51■■□□□ 1.19
SNX6-206ENST00000556162 HNRNPUL2Q1KMD3 747 aaKnown RBP22.51■■□□□ 1.19
SNX6-206ENST00000556162 NUP153P49790 1475 aaKnown RBP22.51■■□□□ 1.19
SNX6-206ENST00000556162 ATP10BO94823 1461 aa22.5■■□□□ 1.19
SNX6-206ENST00000556162 CASKIN1Q8WXD9 1431 aa22.49■■□□□ 1.19
SNX6-206ENST00000556162 ZCCHC11Q5TAX3 1644 aaKnown RBP22.48■■□□□ 1.19
SNX6-206ENST00000556162 MAPKBP1O60336 1514 aa22.47■■□□□ 1.19
SNX6-206ENST00000556162 HECW1Q76N89 1606 aa22.46■■□□□ 1.19
SNX6-206ENST00000556162 TRHP20396 242 aaPredicted RBP22.45■■□□□ 1.19
SNX6-206ENST00000556162 ASXL2Q76L83 1435 aa22.45■■□□□ 1.18
SNX6-206ENST00000556162 PCF11O94913 1555 aaKnown RBP22.43■■□□□ 1.18
SNX6-206ENST00000556162 FYCO1Q9BQS8 1478 aa22.43■■□□□ 1.18
SNX6-206ENST00000556162 VPS8Q8N3P4 1428 aa22.42■■□□□ 1.18
SNX6-206ENST00000556162 EPRSP07814 1512 aaKnown RBP22.42■■□□□ 1.18
SNX6-206ENST00000556162 PLEKHD1A6NEE1 506 aa22.4■■□□□ 1.18
SNX6-206ENST00000556162 CDK11AQ9UQ88 783 aaPredicted RBP22.39■■□□□ 1.17
SNX6-206ENST00000556162 CDK13Q14004 1512 aaKnown RBP22.38■■□□□ 1.17
SNX6-206ENST00000556162 WDR7Q9Y4E6 1490 aa22.37■■□□□ 1.17
SNX6-206ENST00000556162 FAM69CQ0P6D2 419 aa22.37■■□□□ 1.17
SNX6-206ENST00000556162 KCNH8Q96L42 1107 aa22.37■■□□□ 1.17
SNX6-206ENST00000556162 ABCC10Q5T3U5 1492 aa22.36■■□□□ 1.17
SNX6-206ENST00000556162 CCDC18Q5T9S5 1454 aa22.36■■□□□ 1.17
SNX6-206ENST00000556162 LRRIQ1Q96JM4 1722 aa22.3■■□□□ 1.16
SNX6-206ENST00000556162 DIP2BQ9P265 1576 aa22.29■■□□□ 1.16
SNX6-206ENST00000556162 APLP2Q06481 763 aa22.26■■□□□ 1.15
SNX6-206ENST00000556162 GLI2P10070 1586 aa22.24■■□□□ 1.15
SNX6-206ENST00000556162 KIF13AQ9H1H9 1805 aa22.24■■□□□ 1.15
SNX6-206ENST00000556162 TROQ12816 1431 aaPredicted RBP22.24■■□□□ 1.15
SNX6-206ENST00000556162 MTUS2Q5JR59 1369 aa22.21■■□□□ 1.15
SNX6-206ENST00000556162 TIAM1Q13009 1591 aa22.17■■□□□ 1.14
SNX6-206ENST00000556162 MAP3K1Q13233 1512 aa22.17■■□□□ 1.14
SNX6-206ENST00000556162 MAGI3Q5TCQ9 1506 aa22.17■■□□□ 1.14
SNX6-206ENST00000556162 CD109Q6YHK3 1445 aa22.17■■□□□ 1.14
SNX6-206ENST00000556162 ABCA9Q8IUA7 1624 aa22.14■■□□□ 1.14
SNX6-206ENST00000556162 CFAP43Q8NDM7 1665 aa22.14■■□□□ 1.13
SNX6-206ENST00000556162 KIF14Q15058 1648 aa22.13■■□□□ 1.13
SNX6-206ENST00000556162 MAP3K4Q9Y6R4 1608 aa22.13■■□□□ 1.13
SNX6-206ENST00000556162 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.13■■□□□ 1.13
SNX6-206ENST00000556162 KANK4Q5T7N3 995 aaPredicted RBP22.11■■□□□ 1.13
SNX6-206ENST00000556162 EHBP1L1Q8N3D4 1523 aa22.11■■□□□ 1.13
SNX6-206ENST00000556162 LRRC9Q6ZRR7 1453 aa22.11■■□□□ 1.13
SNX6-206ENST00000556162 TSPOAP1O95153 1857 aa22.1■■□□□ 1.13
SNX6-206ENST00000556162 TTC37Q6PGP7 1564 aa22.07■■□□□ 1.12
SNX6-206ENST00000556162 TEX14Q8IWB6 1497 aa22.07■■□□□ 1.12
SNX6-206ENST00000556162 PLCH2O75038 1416 aa22.04■■□□□ 1.12
SNX6-206ENST00000556162 PPRC1Q5VV67 1664 aaKnown RBP22.02■■□□□ 1.12
SNX6-206ENST00000556162 CCNB3Q8WWL7 1395 aa22.02■■□□□ 1.12
SNX6-206ENST00000556162 EFCAB2Q5VUJ9 269 aa22■■□□□ 1.11
SNX6-206ENST00000556162 SUPT6HQ7KZ85 1726 aaKnown RBP22■■□□□ 1.11
SNX6-206ENST00000556162 NCOA2Q15596 1464 aa22■■□□□ 1.11
SNX6-206ENST00000556162 MYO5CQ9NQX4 1742 aa21.98■■□□□ 1.11
SNX6-206ENST00000556162 FANCAO15360 1455 aa21.98■■□□□ 1.11
SNX6-206ENST00000556162 PHLDB1Q86UU1 1377 aa21.97■■□□□ 1.11
SNX6-206ENST00000556162 GPATCH8Q9UKJ3 1502 aaKnown RBP21.97■■□□□ 1.11
SNX6-206ENST00000556162 NEO1Q92859 1461 aa21.97■■□□□ 1.11
SNX6-206ENST00000556162 ARAP3Q8WWN8 1544 aa21.96■■□□□ 1.11
SNX6-206ENST00000556162 CFDP1Q9UEE9 299 aaPredicted RBP21.96■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms