RNA–Protein interactions for RNA: ENST00000556009.5

NPC2-208, Transcript of NPC intracellular cholesterol transporter 2, humanhuman

TSL 5

Gene NPC2, Length 699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC2-208ENST00000556009 IGF1RP08069 1367 aa31.03■■■□□ 2.56
NPC2-208ENST00000556009 CUL7Q14999 1698 aa31■■■□□ 2.55
NPC2-208ENST00000556009 KIF27Q86VH2 1401 aa30.99■■■□□ 2.55
NPC2-208ENST00000556009 KIAA0586Q9BVV6 1533 aa30.89■■■□□ 2.54
NPC2-208ENST00000556009 ADCY10Q96PN6 1610 aa30.88■■■□□ 2.53
NPC2-208ENST00000556009 CARMIL1Q5VZK9 1371 aa30.79■■■□□ 2.52
NPC2-208ENST00000556009 MAPKBP1O60336 1514 aa30.78■■■□□ 2.52
NPC2-208ENST00000556009 NPM1P06748 294 aaKnown RBP eCLIP30.76■■■□□ 2.51
NPC2-208ENST00000556009 DIP2BQ9P265 1576 aa30.75■■■□□ 2.51
NPC2-208ENST00000556009 ABCC10Q5T3U5 1492 aa30.72■■■□□ 2.51
NPC2-208ENST00000556009 IQGAP2Q13576 1575 aa30.65■■■□□ 2.5
NPC2-208ENST00000556009 FAM69CQ0P6D2 419 aa30.64■■■□□ 2.5
NPC2-208ENST00000556009 AEBP2Q6ZN18 517 aaPredicted RBP30.63■■■□□ 2.49
NPC2-208ENST00000556009 TSPOAP1O95153 1857 aa30.61■■■□□ 2.49
NPC2-208ENST00000556009 PTPRGP23470 1445 aa30.61■■■□□ 2.49
NPC2-208ENST00000556009 CARMIL2Q6F5E8 1435 aa30.58■■■□□ 2.49
NPC2-208ENST00000556009 TNIKQ9UKE5 1360 aa30.55■■■□□ 2.48
NPC2-208ENST00000556009 DISP1Q96F81 1524 aa30.51■■■□□ 2.47
NPC2-208ENST00000556009 TTBK1Q5TCY1 1321 aaPredicted RBP30.5■■■□□ 2.47
NPC2-208ENST00000556009 RAPGEF2Q9Y4G8 1499 aa30.49■■■□□ 2.47
NPC2-208ENST00000556009 ABCC2Q92887 1545 aa30.47■■■□□ 2.47
NPC2-208ENST00000556009 KDM6BO15054 1643 aa30.46■■■□□ 2.47
NPC2-208ENST00000556009 UGGT2Q9NYU1 1516 aa30.43■■■□□ 2.46
NPC2-208ENST00000556009 CTTNBP2Q8WZ74 1663 aa30.42■■■□□ 2.46
NPC2-208ENST00000556009 PPRC1Q5VV67 1664 aaKnown RBP30.41■■■□□ 2.46
NPC2-208ENST00000556009 KIAA0556O60303 1618 aa30.4■■■□□ 2.46
NPC2-208ENST00000556009 UHRF1BP1LA0JNW5 1464 aa30.4■■■□□ 2.46
NPC2-208ENST00000556009 ASXL2Q76L83 1435 aa30.37■■■□□ 2.45
NPC2-208ENST00000556009 UACAQ9BZF9 1416 aa30.37■■■□□ 2.45
NPC2-208ENST00000556009 GLI2P10070 1586 aa30.33■■■□□ 2.45
NPC2-208ENST00000556009 ZCCHC11Q5TAX3 1644 aaKnown RBP30.33■■■□□ 2.45
NPC2-208ENST00000556009 PLB1Q6P1J6 1458 aa30.32■■■□□ 2.44
NPC2-208ENST00000556009 KDM5BQ9UGL1 1544 aa30.29■■■□□ 2.44
NPC2-208ENST00000556009 MAP3K4Q9Y6R4 1608 aa30.24■■■□□ 2.43
NPC2-208ENST00000556009 EPRSP07814 1512 aaKnown RBP30.21■■■□□ 2.43
NPC2-208ENST00000556009 PRXQ9BXM0 1461 aa30.19■■■□□ 2.42
NPC2-208ENST00000556009 GOLGA3Q08378 1498 aa30.14■■■□□ 2.42
NPC2-208ENST00000556009 ABCA8O94911 1581 aa30.11■■■□□ 2.41
NPC2-208ENST00000556009 KDM4FA0A1W2PPD8 638 aa30.11■■■□□ 2.41
NPC2-208ENST00000556009 COL17A1Q9UMD9 1497 aaPredicted RBP30.09■■■□□ 2.41
NPC2-208ENST00000556009 WDR7Q9Y4E6 1490 aa30.07■■■□□ 2.4
NPC2-208ENST00000556009 TEX14Q8IWB6 1497 aa30.01■■■□□ 2.4
NPC2-208ENST00000556009 CSRNP3Q8WYN3 585 aa30■■■□□ 2.39
NPC2-208ENST00000556009 CFAP43Q8NDM7 1665 aa29.99■■■□□ 2.39
NPC2-208ENST00000556009 FAM9AQ8IZU1 332 aaPredicted RBP29.93■■■□□ 2.38
NPC2-208ENST00000556009 SAMD9Q5K651 1589 aa29.91■■■□□ 2.38
NPC2-208ENST00000556009 ADGRL1O94910 1474 aa29.91■■■□□ 2.38
NPC2-208ENST00000556009 KCNH8Q96L42 1107 aa29.87■■■□□ 2.37
NPC2-208ENST00000556009 MAGI3Q5TCQ9 1506 aa29.86■■■□□ 2.37
NPC2-208ENST00000556009 EEA1Q15075 1411 aa29.85■■■□□ 2.37
NPC2-208ENST00000556009 CD109Q6YHK3 1445 aa29.85■■■□□ 2.37
NPC2-208ENST00000556009 P3H3Q8IVL6 736 aa29.84■■■□□ 2.37
NPC2-208ENST00000556009 ATP10BO94823 1461 aa29.8■■■□□ 2.36
NPC2-208ENST00000556009 RAPGEF6Q8TEU7 1601 aa29.79■■■□□ 2.36
NPC2-208ENST00000556009 ARID3CA6NKF2 412 aa29.78■■■□□ 2.36
NPC2-208ENST00000556009 ABCA9Q8IUA7 1624 aa29.74■■■□□ 2.35
NPC2-208ENST00000556009 KIF21BO75037 1637 aa29.69■■■□□ 2.34
NPC2-208ENST00000556009 NUP153P49790 1475 aaKnown RBP29.64■■■□□ 2.34
NPC2-208ENST00000556009 ARAP3Q8WWN8 1544 aa29.64■■■□□ 2.34
NPC2-208ENST00000556009 FHOD3Q2V2M9 1422 aa29.63■■■□□ 2.33
NPC2-208ENST00000556009 PHLDB1Q86UU1 1377 aa29.62■■■□□ 2.33
NPC2-208ENST00000556009 RANGAP1P46060 587 aaPredicted RBP29.59■■■□□ 2.33
NPC2-208ENST00000556009 HECW2Q9P2P5 1572 aa29.56■■■□□ 2.32
NPC2-208ENST00000556009 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.56■■■□□ 2.32
NPC2-208ENST00000556009 HNRNPUL2Q1KMD3 747 aaKnown RBP29.56■■■□□ 2.32
NPC2-208ENST00000556009 FRMPD1Q5SYB0 1578 aa29.53■■■□□ 2.32
NPC2-208ENST00000556009 EFCAB5A4FU69 1503 aa29.51■■■□□ 2.32
NPC2-208ENST00000556009 NEO1Q92859 1461 aa29.49■■■□□ 2.31
NPC2-208ENST00000556009 PLEKHD1A6NEE1 506 aa29.49■■■□□ 2.31
NPC2-208ENST00000556009 ADAMTSL3P82987 1691 aa29.42■■■□□ 2.3
NPC2-208ENST00000556009 RAPGEF3O95398 923 aa29.42■■■□□ 2.3
NPC2-208ENST00000556009 TTC37Q6PGP7 1564 aa29.42■■■□□ 2.3
NPC2-208ENST00000556009 RICTORQ6R327 1708 aa29.42■■■□□ 2.3
NPC2-208ENST00000556009 CHIC1Q5VXU3 224 aa29.41■■■□□ 2.3
NPC2-208ENST00000556009 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.4■■■□□ 2.3
NPC2-208ENST00000556009 CDK13Q14004 1512 aaKnown RBP29.39■■■□□ 2.3
NPC2-208ENST00000556009 UBTFP17480 764 aaKnown RBP29.36■■■□□ 2.29
NPC2-208ENST00000556009 BCORL1Q5H9F3 1711 aa29.36■■■□□ 2.29
NPC2-208ENST00000556009 CFAP74Q9C0B2 1584 aa29.35■■■□□ 2.29
NPC2-208ENST00000556009 ARHGEF40Q8TER5 1519 aa29.32■■■□□ 2.28
NPC2-208ENST00000556009 EHMT2Q96KQ7 1210 aa29.31■■■□□ 2.28
NPC2-208ENST00000556009 FANCAO15360 1455 aa29.29■■■□□ 2.28
NPC2-208ENST00000556009 MADDQ8WXG6 1647 aa29.29■■■□□ 2.28
NPC2-208ENST00000556009 AKNAQ7Z591 1439 aa29.28■■■□□ 2.28
NPC2-208ENST00000556009 DENND4BO75064 1496 aaPredicted RBP29.27■■■□□ 2.28
NPC2-208ENST00000556009 PTPRMP28827 1452 aa29.27■■■□□ 2.28
NPC2-208ENST00000556009 ARHGAP35Q9NRY4 1499 aa29.27■■■□□ 2.28
NPC2-208ENST00000556009 FMN1Q68DA7 1419 aa29.27■■■□□ 2.28
NPC2-208ENST00000556009 HECW1Q76N89 1606 aa29.27■■■□□ 2.28
NPC2-208ENST00000556009 LRRIQ1Q96JM4 1722 aa29.26■■■□□ 2.27
NPC2-208ENST00000556009 SIGLEC1Q9BZZ2 1709 aa29.26■■■□□ 2.27
NPC2-208ENST00000556009 ILDR1Q86SU0 546 aaPredicted RBP29.23■■■□□ 2.27
NPC2-208ENST00000556009 ZMYM4Q5VZL5 1548 aa29.23■■■□□ 2.27
NPC2-208ENST00000556009 MYO5CQ9NQX4 1742 aa29.2■■■□□ 2.27
NPC2-208ENST00000556009 RIMS1Q86UR5 1692 aaKnown RBP29.2■■■□□ 2.26
NPC2-208ENST00000556009 CDK11AQ9UQ88 783 aaPredicted RBP29.18■■■□□ 2.26
NPC2-208ENST00000556009 KIF14Q15058 1648 aa29.18■■■□□ 2.26
NPC2-208ENST00000556009 PLCH2O75038 1416 aa29.17■■■□□ 2.26
NPC2-208ENST00000556009 ATP1B4Q9UN42 357 aaPredicted RBP29.16■■■□□ 2.26
NPC2-208ENST00000556009 ARID4BQ4LE39 1312 aaPredicted RBP29.16■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms