RNA–Protein interactions for RNA: ENST00000555904.1

ABCD4-223, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-223ENST00000555904 KIAA0586Q9BVV6 1533 aa20.32■□□□□ 0.84
ABCD4-223ENST00000555904 CTTNBP2Q8WZ74 1663 aa20.3■□□□□ 0.84
ABCD4-223ENST00000555904 IQGAP2Q13576 1575 aa20.29■□□□□ 0.84
ABCD4-223ENST00000555904 CLASP1Q7Z460 1538 aa20.28■□□□□ 0.84
ABCD4-223ENST00000555904 LOC105371045A0A1W2PR82 267 aa20.22■□□□□ 0.83
ABCD4-223ENST00000555904 TNIKQ9UKE5 1360 aa20.21■□□□□ 0.83
ABCD4-223ENST00000555904 JPH4Q96JJ6 628 aa20.19■□□□□ 0.82
ABCD4-223ENST00000555904 SHROOM2Q13796 1616 aa20.16■□□□□ 0.82
ABCD4-223ENST00000555904 UGGT2Q9NYU1 1516 aa20.16■□□□□ 0.82
ABCD4-223ENST00000555904 RANGAP1P46060 587 aaPredicted RBP20.15■□□□□ 0.82
ABCD4-223ENST00000555904 CARMIL2Q6F5E8 1435 aa20.14■□□□□ 0.81
ABCD4-223ENST00000555904 PRG4Q92954 1404 aaPredicted RBP20.14■□□□□ 0.81
ABCD4-223ENST00000555904 EFCAB5A4FU69 1503 aa20.1■□□□□ 0.81
ABCD4-223ENST00000555904 CLIP1P30622 1438 aa20.08■□□□□ 0.8
ABCD4-223ENST00000555904 CEP162Q5TB80 1403 aa20.08■□□□□ 0.8
ABCD4-223ENST00000555904 KIAA0556O60303 1618 aa20.06■□□□□ 0.8
ABCD4-223ENST00000555904 DISP1Q96F81 1524 aa20.06■□□□□ 0.8
ABCD4-223ENST00000555904 SAMD9Q5K651 1589 aa20.05■□□□□ 0.8
ABCD4-223ENST00000555904 ARHGEF11O15085 1522 aa20.05■□□□□ 0.8
ABCD4-223ENST00000555904 ERCC6L2Q5T890 1561 aa20.01■□□□□ 0.79
ABCD4-223ENST00000555904 P3H3Q8IVL6 736 aa20.01■□□□□ 0.79
ABCD4-223ENST00000555904 ARHGAP35Q9NRY4 1499 aa20■□□□□ 0.79
ABCD4-223ENST00000555904 DNAJC5Q9H3Z4 198 aa20■□□□□ 0.79
ABCD4-223ENST00000555904 RIMBP3CA6NJZ7 1639 aa19.98■□□□□ 0.79
ABCD4-223ENST00000555904 RIMBP3BA6NNM3 1639 aa19.98■□□□□ 0.79
ABCD4-223ENST00000555904 RIMBP3Q9UFD9 1639 aa19.98■□□□□ 0.79
ABCD4-223ENST00000555904 FHOD3Q2V2M9 1422 aa19.97■□□□□ 0.79
ABCD4-223ENST00000555904 TTBK1Q5TCY1 1321 aaPredicted RBP19.97■□□□□ 0.79
ABCD4-223ENST00000555904 PTPRGP23470 1445 aa19.96■□□□□ 0.79
ABCD4-223ENST00000555904 FMN1Q68DA7 1419 aa19.93■□□□□ 0.78
ABCD4-223ENST00000555904 ARAP1Q96P48 1450 aa19.92■□□□□ 0.78
ABCD4-223ENST00000555904 CYB5RLQ6IPT4 315 aa19.85■□□□□ 0.77
ABCD4-223ENST00000555904 UACAQ9BZF9 1416 aa19.83■□□□□ 0.76
ABCD4-223ENST00000555904 PLB1Q6P1J6 1458 aa19.82■□□□□ 0.76
ABCD4-223ENST00000555904 VPS8Q8N3P4 1428 aa19.81■□□□□ 0.76
ABCD4-223ENST00000555904 RAPGEF6Q8TEU7 1601 aa19.8■□□□□ 0.76
ABCD4-223ENST00000555904 ABCA8O94911 1581 aa19.79■□□□□ 0.76
ABCD4-223ENST00000555904 ATP1B4Q9UN42 357 aaPredicted RBP19.79■□□□□ 0.76
ABCD4-223ENST00000555904 ABCC2Q92887 1545 aa19.79■□□□□ 0.76
ABCD4-223ENST00000555904 UHRF1BP1LA0JNW5 1464 aa19.78■□□□□ 0.76
ABCD4-223ENST00000555904 FYCO1Q9BQS8 1478 aa19.78■□□□□ 0.76
ABCD4-223ENST00000555904 CASKIN1Q8WXD9 1431 aa19.77■□□□□ 0.76
ABCD4-223ENST00000555904 HECW1Q76N89 1606 aa19.77■□□□□ 0.76
ABCD4-223ENST00000555904 PCF11O94913 1555 aaKnown RBP19.77■□□□□ 0.76
ABCD4-223ENST00000555904 ADCY10Q96PN6 1610 aa19.74■□□□□ 0.75
ABCD4-223ENST00000555904 NPM1P06748 294 aaKnown RBP eCLIP19.73■□□□□ 0.75
ABCD4-223ENST00000555904 NUP153P49790 1475 aaKnown RBP19.72■□□□□ 0.75
ABCD4-223ENST00000555904 CCDC18Q5T9S5 1454 aa19.69■□□□□ 0.74
ABCD4-223ENST00000555904 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.69■□□□□ 0.74
ABCD4-223ENST00000555904 HNRNPUL2Q1KMD3 747 aaKnown RBP19.69■□□□□ 0.74
ABCD4-223ENST00000555904 ARID3CA6NKF2 412 aa19.68■□□□□ 0.74
ABCD4-223ENST00000555904 KDM5BQ9UGL1 1544 aa19.67■□□□□ 0.74
ABCD4-223ENST00000555904 APLP2Q06481 763 aa19.67■□□□□ 0.74
ABCD4-223ENST00000555904 EPRSP07814 1512 aaKnown RBP19.66■□□□□ 0.74
ABCD4-223ENST00000555904 ZCCHC11Q5TAX3 1644 aaKnown RBP19.64■□□□□ 0.73
ABCD4-223ENST00000555904 ATP10BO94823 1461 aa19.63■□□□□ 0.73
ABCD4-223ENST00000555904 CDK13Q14004 1512 aaKnown RBP19.62■□□□□ 0.73
ABCD4-223ENST00000555904 CDK11AQ9UQ88 783 aaPredicted RBP19.62■□□□□ 0.73
ABCD4-223ENST00000555904 PLEKHD1A6NEE1 506 aa19.57■□□□□ 0.72
ABCD4-223ENST00000555904 TIAM1Q13009 1591 aa19.57■□□□□ 0.72
ABCD4-223ENST00000555904 LRRIQ1Q96JM4 1722 aa19.56■□□□□ 0.72
ABCD4-223ENST00000555904 MAPKBP1O60336 1514 aa19.56■□□□□ 0.72
ABCD4-223ENST00000555904 MAP3K1Q13233 1512 aa19.56■□□□□ 0.72
ABCD4-223ENST00000555904 CFAP43Q8NDM7 1665 aa19.56■□□□□ 0.72
ABCD4-223ENST00000555904 ASXL2Q76L83 1435 aa19.55■□□□□ 0.72
ABCD4-223ENST00000555904 WDR7Q9Y4E6 1490 aa19.54■□□□□ 0.72
ABCD4-223ENST00000555904 MTUS2Q5JR59 1369 aa19.53■□□□□ 0.72
ABCD4-223ENST00000555904 EHBP1L1Q8N3D4 1523 aa19.5■□□□□ 0.71
ABCD4-223ENST00000555904 TROQ12816 1431 aaPredicted RBP19.5■□□□□ 0.71
ABCD4-223ENST00000555904 LRRC9Q6ZRR7 1453 aa19.48■□□□□ 0.71
ABCD4-223ENST00000555904 KIF14Q15058 1648 aa19.46■□□□□ 0.71
ABCD4-223ENST00000555904 KCNH8Q96L42 1107 aa19.45■□□□□ 0.7
ABCD4-223ENST00000555904 MAGI3Q5TCQ9 1506 aa19.45■□□□□ 0.7
ABCD4-223ENST00000555904 KANK4Q5T7N3 995 aaPredicted RBP19.42■□□□□ 0.7
ABCD4-223ENST00000555904 ABCC10Q5T3U5 1492 aa19.41■□□□□ 0.7
ABCD4-223ENST00000555904 SUPT6HQ7KZ85 1726 aaKnown RBP19.39■□□□□ 0.7
ABCD4-223ENST00000555904 DIP2BQ9P265 1576 aa19.39■□□□□ 0.69
ABCD4-223ENST00000555904 FAM69CQ0P6D2 419 aa19.37■□□□□ 0.69
ABCD4-223ENST00000555904 TRHP20396 242 aaPredicted RBP19.36■□□□□ 0.69
ABCD4-223ENST00000555904 GLI2P10070 1586 aa19.36■□□□□ 0.69
ABCD4-223ENST00000555904 NCOA2Q15596 1464 aa19.35■□□□□ 0.69
ABCD4-223ENST00000555904 PPARGC1BQ86YN6 1023 aaKnown RBP19.35■□□□□ 0.69
ABCD4-223ENST00000555904 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.35■□□□□ 0.69
ABCD4-223ENST00000555904 ABCA9Q8IUA7 1624 aa19.34■□□□□ 0.69
ABCD4-223ENST00000555904 CCNB3Q8WWL7 1395 aa19.33■□□□□ 0.69
ABCD4-223ENST00000555904 TTC37Q6PGP7 1564 aa19.32■□□□□ 0.68
ABCD4-223ENST00000555904 CD109Q6YHK3 1445 aa19.31■□□□□ 0.68
ABCD4-223ENST00000555904 MAP3K4Q9Y6R4 1608 aa19.29■□□□□ 0.68
ABCD4-223ENST00000555904 MYO5CQ9NQX4 1742 aa19.28■□□□□ 0.68
ABCD4-223ENST00000555904 KIF13AQ9H1H9 1805 aa19.28■□□□□ 0.68
ABCD4-223ENST00000555904 ITSN2Q9NZM3 1697 aa19.27■□□□□ 0.68
ABCD4-223ENST00000555904 PLCH2O75038 1416 aa19.25■□□□□ 0.67
ABCD4-223ENST00000555904 MYOM3Q5VTT5 1437 aa19.25■□□□□ 0.67
ABCD4-223ENST00000555904 ARHGAP5Q13017 1502 aa19.25■□□□□ 0.67
ABCD4-223ENST00000555904 PREX2Q70Z35 1606 aa19.25■□□□□ 0.67
ABCD4-223ENST00000555904 GPATCH8Q9UKJ3 1502 aaKnown RBP19.25■□□□□ 0.67
ABCD4-223ENST00000555904 TEX14Q8IWB6 1497 aa19.24■□□□□ 0.67
ABCD4-223ENST00000555904 CFDP1Q9UEE9 299 aaPredicted RBP19.24■□□□□ 0.67
ABCD4-223ENST00000555904 ARAP3Q8WWN8 1544 aa19.24■□□□□ 0.67
ABCD4-223ENST00000555904 PHLDB1Q86UU1 1377 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms