RNA–Protein interactions for RNA: ENST00000555246.5

LINC00871-201, long intergenic non-protein coding RNA 871, humanhuman

TSL 5 BASIC

Gene LINC00871, Length 408 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00871-201ENST00000555246 ABCA5Q8WWZ7 1642 aa9.13□□□□□ -0.95
LINC00871-201ENST00000555246 SYNJ1O43426 1573 aa9.13□□□□□ -0.95
LINC00871-201ENST00000555246 RNF216Q9NWF9 866 aaPredicted RBP9.12□□□□□ -0.95
LINC00871-201ENST00000555246 GAPVD1Q14C86 1478 aa9.12□□□□□ -0.95
LINC00871-201ENST00000555246 PBRM1Q86U86 1689 aa9.1□□□□□ -0.95
LINC00871-201ENST00000555246 WRNQ14191 1432 aaPredicted RBP eCLIP9.08□□□□□ -0.96
LINC00871-201ENST00000555246 CYB5RLQ6IPT4 315 aa9.08□□□□□ -0.96
LINC00871-201ENST00000555246 TOP2BQ02880 1626 aa9.08□□□□□ -0.96
LINC00871-201ENST00000555246 BIVM-ERCC5R4GMW8 1640 aa9.08□□□□□ -0.96
LINC00871-201ENST00000555246 FBLN2P98095 1184 aa9.07□□□□□ -0.96
LINC00871-201ENST00000555246 CHMP7Q8WUX9 453 aaPredicted RBP9.06□□□□□ -0.96
LINC00871-201ENST00000555246 NUP160Q12769 1436 aa9.05□□□□□ -0.96
LINC00871-201ENST00000555246 ADAMTS12P58397 1594 aa9.05□□□□□ -0.96
LINC00871-201ENST00000555246 GRIN2AQ12879 1464 aa9.05□□□□□ -0.96
LINC00871-201ENST00000555246 ERICH3Q5RHP9 1530 aa9.04□□□□□ -0.96
LINC00871-201ENST00000555246 HOXD11P31277 338 aaPredicted RBP9.03□□□□□ -0.96
LINC00871-201ENST00000555246 FHAD1B1AJZ9 1412 aa9.02□□□□□ -0.97
LINC00871-201ENST00000555246 SHROOM2Q13796 1616 aa9.02□□□□□ -0.97
LINC00871-201ENST00000555246 DCAF8L1A6NGE4 600 aa9.01□□□□□ -0.97
LINC00871-201ENST00000555246 CEP170Q5SW79 1584 aa9□□□□□ -0.97
LINC00871-201ENST00000555246 SUPT5HO00267 1087 aaKnown RBP8.99□□□□□ -0.97
LINC00871-201ENST00000555246 ERCC6L2Q5T890 1561 aa8.95□□□□□ -0.98
LINC00871-201ENST00000555246 TRHP20396 242 aaPredicted RBP8.94□□□□□ -0.98
LINC00871-201ENST00000555246 RUSC2Q8N2Y8 1516 aa8.94□□□□□ -0.98
LINC00871-201ENST00000555246 SLC4A2P04920 1241 aa8.92□□□□□ -0.98
LINC00871-201ENST00000555246 CACNB1Q02641 598 aaPredicted RBP8.92□□□□□ -0.98
LINC00871-201ENST00000555246 PRG4Q92954 1404 aaPredicted RBP8.89□□□□□ -0.99
LINC00871-201ENST00000555246 CUL7Q14999 1698 aa8.88□□□□□ -0.99
LINC00871-201ENST00000555246 KIAA0586Q9BVV6 1533 aa8.88□□□□□ -0.99
LINC00871-201ENST00000555246 KIF27Q86VH2 1401 aa8.88□□□□□ -0.99
LINC00871-201ENST00000555246 IGF1RP08069 1367 aa8.87□□□□□ -0.99
LINC00871-201ENST00000555246 MAPKBP1O60336 1514 aa8.86□□□□□ -0.99
LINC00871-201ENST00000555246 JPH4Q96JJ6 628 aa8.86□□□□□ -0.99
LINC00871-201ENST00000555246 RNF39Q9H2S5 420 aa8.84□□□□□ -0.99
LINC00871-201ENST00000555246 ABCC10Q5T3U5 1492 aa8.83□□□□□ -1
LINC00871-201ENST00000555246 KIF13AQ9H1H9 1805 aa8.82□□□□□ -1
LINC00871-201ENST00000555246 ADCY10Q96PN6 1610 aa8.82□□□□□ -1
LINC00871-201ENST00000555246 DIP2BQ9P265 1576 aa8.81□□□□□ -1
LINC00871-201ENST00000555246 CARMIL1Q5VZK9 1371 aa8.79□□□□□ -1
LINC00871-201ENST00000555246 MYCNP04198 464 aaPredicted RBP8.79□□□□□ -1
LINC00871-201ENST00000555246 ATXN8OSP0DMR3 200 aa8.79□□□□□ -1
LINC00871-201ENST00000555246 IQGAP2Q13576 1575 aa8.78□□□□□ -1
LINC00871-201ENST00000555246 UHRF1BP1LA0JNW5 1464 aa8.77□□□□□ -1.01
LINC00871-201ENST00000555246 ABCC2Q92887 1545 aa8.76□□□□□ -1.01
LINC00871-201ENST00000555246 CARMIL2Q6F5E8 1435 aa8.76□□□□□ -1.01
LINC00871-201ENST00000555246 UGGT2Q9NYU1 1516 aa8.75□□□□□ -1.01
LINC00871-201ENST00000555246 DISP1Q96F81 1524 aa8.75□□□□□ -1.01
LINC00871-201ENST00000555246 TNIKQ9UKE5 1360 aa8.74□□□□□ -1.01
LINC00871-201ENST00000555246 PTPRGP23470 1445 aa8.74□□□□□ -1.01
LINC00871-201ENST00000555246 RAPGEF2Q9Y4G8 1499 aa8.73□□□□□ -1.01
LINC00871-201ENST00000555246 NPM1P06748 294 aaKnown RBP eCLIP8.73□□□□□ -1.01
LINC00871-201ENST00000555246 GLI2P10070 1586 aa8.73□□□□□ -1.01
LINC00871-201ENST00000555246 FAM69CQ0P6D2 419 aa8.72□□□□□ -1.01
LINC00871-201ENST00000555246 RTN4Q9NQC3 1192 aaKnown RBP8.72□□□□□ -1.01
LINC00871-201ENST00000555246 PLB1Q6P1J6 1458 aa8.71□□□□□ -1.01
LINC00871-201ENST00000555246 KDM5BQ9UGL1 1544 aa8.71□□□□□ -1.01
LINC00871-201ENST00000555246 C1QBPQ07021 282 aaKnown RBP8.71□□□□□ -1.02
LINC00871-201ENST00000555246 KIAA0556O60303 1618 aa8.7□□□□□ -1.02
LINC00871-201ENST00000555246 UACAQ9BZF9 1416 aa8.7□□□□□ -1.02
LINC00871-201ENST00000555246 AMER1Q5JTC6 1135 aaPredicted RBP8.69□□□□□ -1.02
LINC00871-201ENST00000555246 ASXL2Q76L83 1435 aa8.69□□□□□ -1.02
LINC00871-201ENST00000555246 KDM6BO15054 1643 aa8.69□□□□□ -1.02
LINC00871-201ENST00000555246 PRXQ9BXM0 1461 aa8.68□□□□□ -1.02
LINC00871-201ENST00000555246 FKBP8Q14318 412 aa8.67□□□□□ -1.02
LINC00871-201ENST00000555246 PPRC1Q5VV67 1664 aaKnown RBP8.67□□□□□ -1.02
LINC00871-201ENST00000555246 EPRSP07814 1512 aaKnown RBP8.66□□□□□ -1.02
LINC00871-201ENST00000555246 MAP3K4Q9Y6R4 1608 aa8.65□□□□□ -1.02
LINC00871-201ENST00000555246 CTTNBP2Q8WZ74 1663 aa8.65□□□□□ -1.03
LINC00871-201ENST00000555246 GOLGA3Q08378 1498 aa8.64□□□□□ -1.03
LINC00871-201ENST00000555246 ZCCHC11Q5TAX3 1644 aaKnown RBP8.64□□□□□ -1.03
LINC00871-201ENST00000555246 WDR7Q9Y4E6 1490 aa8.64□□□□□ -1.03
LINC00871-201ENST00000555246 ABCA8O94911 1581 aa8.63□□□□□ -1.03
LINC00871-201ENST00000555246 TEX14Q8IWB6 1497 aa8.63□□□□□ -1.03
LINC00871-201ENST00000555246 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.61□□□□□ -1.03
LINC00871-201ENST00000555246 COL17A1Q9UMD9 1497 aaPredicted RBP8.6□□□□□ -1.03
LINC00871-201ENST00000555246 SLC24A1O60721 1099 aa8.6□□□□□ -1.03
LINC00871-201ENST00000555246 MAGI3Q5TCQ9 1506 aa8.59□□□□□ -1.03
LINC00871-201ENST00000555246 KDM4FA0A1W2PPD8 638 aa8.59□□□□□ -1.03
LINC00871-201ENST00000555246 TSPOAP1O95153 1857 aa8.59□□□□□ -1.03
LINC00871-201ENST00000555246 CFAP43Q8NDM7 1665 aa8.58□□□□□ -1.04
LINC00871-201ENST00000555246 SAMD9Q5K651 1589 aa8.57□□□□□ -1.04
LINC00871-201ENST00000555246 ATF5Q9Y2D1 282 aaPredicted RBP8.57□□□□□ -1.04
LINC00871-201ENST00000555246 EEA1Q15075 1411 aa8.56□□□□□ -1.04
LINC00871-201ENST00000555246 ADGRL1O94910 1474 aa8.54□□□□□ -1.04
LINC00871-201ENST00000555246 ARAP3Q8WWN8 1544 aa8.54□□□□□ -1.04
LINC00871-201ENST00000555246 CD109Q6YHK3 1445 aa8.54□□□□□ -1.04
LINC00871-201ENST00000555246 TTBK1Q5TCY1 1321 aaPredicted RBP8.54□□□□□ -1.04
LINC00871-201ENST00000555246 ABCA9Q8IUA7 1624 aa8.53□□□□□ -1.04
LINC00871-201ENST00000555246 ATP10BO94823 1461 aa8.52□□□□□ -1.05
LINC00871-201ENST00000555246 PHLDB1Q86UU1 1377 aa8.52□□□□□ -1.05
LINC00871-201ENST00000555246 RAPGEF6Q8TEU7 1601 aa8.5□□□□□ -1.05
LINC00871-201ENST00000555246 NUP153P49790 1475 aaKnown RBP8.5□□□□□ -1.05
LINC00871-201ENST00000555246 NEO1Q92859 1461 aa8.5□□□□□ -1.05
LINC00871-201ENST00000555246 EFCAB5A4FU69 1503 aa8.49□□□□□ -1.05
LINC00871-201ENST00000555246 KIF21BO75037 1637 aa8.49□□□□□ -1.05
LINC00871-201ENST00000555246 SAMD1Q6SPF0 538 aaPredicted RBP8.47□□□□□ -1.05
LINC00871-201ENST00000555246 U3KPZ7 1027 aaPredicted RBP8.47□□□□□ -1.05
LINC00871-201ENST00000555246 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.46□□□□□ -1.06
LINC00871-201ENST00000555246 HNRNPUL2Q1KMD3 747 aaKnown RBP8.46□□□□□ -1.06
LINC00871-201ENST00000555246 FAM9AQ8IZU1 332 aaPredicted RBP8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms