RNA–Protein interactions for RNA: ENST00000554879.5

PCNX1-209, Transcript of pecanex 1, humanhuman

TSL 1 (best)

Gene PCNX1, Length 4,431 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-209ENST00000554879 MTUS2Q5JR59 1369 aa24.16■■□□□ 1.46
PCNX1-209ENST00000554879 LAMC3Q9Y6N6 1575 aa24.16■■□□□ 1.46
PCNX1-209ENST00000554879 DNMBPQ6XZF7 1577 aa24.13■■□□□ 1.45
PCNX1-209ENST00000554879 FHOD3Q2V2M9 1422 aa24.13■■□□□ 1.45
PCNX1-209ENST00000554879 BIVM-ERCC5R4GMW8 1640 aa24.12■■□□□ 1.45
PCNX1-209ENST00000554879 BCL11AQ9H165 835 aa24.1■■□□□ 1.45
PCNX1-209ENST00000554879 URB2Q14146 1524 aaKnown RBP24.09■■□□□ 1.45
PCNX1-209ENST00000554879 ZNF777Q9ULD5 760 aaPredicted RBP24.08■■□□□ 1.45
PCNX1-209ENST00000554879 FHAD1B1AJZ9 1412 aa24.05■■□□□ 1.44
PCNX1-209ENST00000554879 CDK11AQ9UQ88 783 aaPredicted RBP24.04■■□□□ 1.44
PCNX1-209ENST00000554879 TRIM52Q96A61 297 aa24.03■■□□□ 1.44
PCNX1-209ENST00000554879 MRC2Q9UBG0 1479 aa24.03■■□□□ 1.44
PCNX1-209ENST00000554879 ERICH3Q5RHP9 1530 aa24.03■■□□□ 1.44
PCNX1-209ENST00000554879 CHIC2Q9UKJ5 165 aa24.02■■□□□ 1.44
PCNX1-209ENST00000554879 ARAP1Q96P48 1450 aa23.99■■□□□ 1.43
PCNX1-209ENST00000554879 MYT1LQ9UL68 1186 aa23.98■■□□□ 1.43
PCNX1-209ENST00000554879 ABCA10Q8WWZ4 1543 aa23.96■■□□□ 1.43
PCNX1-209ENST00000554879 ARHGAP35Q9NRY4 1499 aa23.93■■□□□ 1.42
PCNX1-209ENST00000554879 CCNB3Q8WWL7 1395 aa23.89■■□□□ 1.42
PCNX1-209ENST00000554879 FMN1Q68DA7 1419 aa23.87■■□□□ 1.41
PCNX1-209ENST00000554879 DIEXFQ68CQ4 756 aaKnown RBP23.83■■□□□ 1.41
PCNX1-209ENST00000554879 GRIN2BQ13224 1484 aa23.83■■□□□ 1.41
PCNX1-209ENST00000554879 JPH4Q96JJ6 628 aa23.83■■□□□ 1.4
PCNX1-209ENST00000554879 RRP7BPQ9NSQ0 103 aa23.82■■□□□ 1.4
PCNX1-209ENST00000554879 ZNF608Q9ULD9 1512 aaPredicted RBP23.79■■□□□ 1.4
PCNX1-209ENST00000554879 IFT140Q96RY7 1462 aa23.79■■□□□ 1.4
PCNX1-209ENST00000554879 PLEKHD1A6NEE1 506 aa23.78■■□□□ 1.4
PCNX1-209ENST00000554879 KIF21AQ7Z4S6 1674 aa23.77■■□□□ 1.4
PCNX1-209ENST00000554879 KCNH8Q96L42 1107 aa23.77■■□□□ 1.4
PCNX1-209ENST00000554879 ERICH6Q7L0X2 663 aa23.75■■□□□ 1.39
PCNX1-209ENST00000554879 PRDM2Q13029 1718 aa23.73■■□□□ 1.39
PCNX1-209ENST00000554879 SNAPC4Q5SXM2 1469 aa23.71■■□□□ 1.39
PCNX1-209ENST00000554879 ZNF316A6NFI3 1004 aaPredicted RBP23.69■■□□□ 1.38
PCNX1-209ENST00000554879 CFDP1Q9UEE9 299 aaPredicted RBP23.68■■□□□ 1.38
PCNX1-209ENST00000554879 CARMIL2Q6F5E8 1435 aa23.68■■□□□ 1.38
PCNX1-209ENST00000554879 PHLDB1Q86UU1 1377 aa23.59■■□□□ 1.37
PCNX1-209ENST00000554879 CUL7Q14999 1698 aa23.59■■□□□ 1.37
PCNX1-209ENST00000554879 LRRC9Q6ZRR7 1453 aa23.56■■□□□ 1.36
PCNX1-209ENST00000554879 ZNF326Q5BKZ1 582 aaKnown RBP23.56■■□□□ 1.36
PCNX1-209ENST00000554879 SIN3AQ96ST3 1273 aa23.56■■□□□ 1.36
PCNX1-209ENST00000554879 CASKIN1Q8WXD9 1431 aa23.56■■□□□ 1.36
PCNX1-209ENST00000554879 NPM1P06748 294 aaKnown RBP eCLIP23.56■■□□□ 1.36
PCNX1-209ENST00000554879 TSPY4P0CV99 314 aa23.55■■□□□ 1.36
PCNX1-209ENST00000554879 TSPY10P0CW01 314 aa23.55■■□□□ 1.36
PCNX1-209ENST00000554879 POLR3GLQ9BT43 218 aa23.55■■□□□ 1.36
PCNX1-209ENST00000554879 RAB3GAP2Q9H2M9 1393 aa23.53■■□□□ 1.36
PCNX1-209ENST00000554879 PRKCSHP14314 528 aaPredicted RBP23.51■■□□□ 1.35
PCNX1-209ENST00000554879 EFCAB5A4FU69 1503 aa23.5■■□□□ 1.35
PCNX1-209ENST00000554879 SETD5Q9C0A6 1442 aa23.49■■□□□ 1.35
PCNX1-209ENST00000554879 CNGB1Q14028 1251 aaPredicted RBP23.48■■□□□ 1.35
PCNX1-209ENST00000554879 TONSLQ96HA7 1378 aa23.47■■□□□ 1.35
PCNX1-209ENST00000554879 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.46■■□□□ 1.355e-7■□□□□ 8.8
PCNX1-209ENST00000554879 FYCO1Q9BQS8 1478 aa23.46■■□□□ 1.35
PCNX1-209ENST00000554879 ANP32EQ9BTT0 268 aa23.46■■□□□ 1.35
PCNX1-209ENST00000554879 PTPRGP23470 1445 aa23.45■■□□□ 1.34
PCNX1-209ENST00000554879 HIRIP3Q9BW71 556 aaPredicted RBP23.44■■□□□ 1.34
PCNX1-209ENST00000554879 PCF11O94913 1555 aaKnown RBP23.44■■□□□ 1.34
PCNX1-209ENST00000554879 TIAM1Q13009 1591 aa23.43■■□□□ 1.34
PCNX1-209ENST00000554879 GRIN2AQ12879 1464 aa23.43■■□□□ 1.34
PCNX1-209ENST00000554879 IQGAP2Q13576 1575 aa23.42■■□□□ 1.34
PCNX1-209ENST00000554879 SLC4A1APQ9BWU0 796 aaKnown RBP23.42■■□□□ 1.34
PCNX1-209ENST00000554879 KIAA0586Q9BVV6 1533 aa23.42■■□□□ 1.34
PCNX1-209ENST00000554879 SYNJ2O15056 1496 aa23.38■■□□□ 1.33
PCNX1-209ENST00000554879 ZNF644Q9H582 1327 aaPredicted RBP23.38■■□□□ 1.33
PCNX1-209ENST00000554879 CCDC18Q5T9S5 1454 aa23.38■■□□□ 1.33
PCNX1-209ENST00000554879 WDR62O43379 1518 aa23.37■■□□□ 1.33
PCNX1-209ENST00000554879 BCANQ96GW7 911 aa23.37■■□□□ 1.33
PCNX1-209ENST00000554879 PRG4Q92954 1404 aaPredicted RBP23.36■■□□□ 1.33
PCNX1-209ENST00000554879 ABCA5Q8WWZ7 1642 aa23.35■■□□□ 1.33
PCNX1-209ENST00000554879 FGD6Q6ZV73 1430 aa23.35■■□□□ 1.33
PCNX1-209ENST00000554879 RRBP1Q9P2E9 1410 aaKnown RBP23.35■■□□□ 1.33
PCNX1-209ENST00000554879 DHX57Q6P158 1386 aaKnown RBP23.35■■□□□ 1.33
PCNX1-209ENST00000554879 MAGI1Q96QZ7 1491 aaPredicted RBP23.35■■□□□ 1.33
PCNX1-209ENST00000554879 NCOA2Q15596 1464 aa23.35■■□□□ 1.33
PCNX1-209ENST00000554879 FOXD1Q16676 465 aa23.34■■□□□ 1.33
PCNX1-209ENST00000554879 TARBP1Q13395 1621 aaKnown RBP23.34■■□□□ 1.33
PCNX1-209ENST00000554879 CDK13Q14004 1512 aaKnown RBP23.31■■□□□ 1.32
PCNX1-209ENST00000554879 CLSPNQ9HAW4 1339 aa23.31■■□□□ 1.32
PCNX1-209ENST00000554879 MYOM3Q5VTT5 1437 aa23.3■■□□□ 1.32
PCNX1-209ENST00000554879 HNRNPMP52272 730 aaKnown RBP eCLIP23.3■■□□□ 1.321e-6■■■■□ 22.1
PCNX1-209ENST00000554879 EIF4G3O43432 1585 aaKnown RBP23.29■■□□□ 1.32
PCNX1-209ENST00000554879 ADAMTS12P58397 1594 aa23.27■■□□□ 1.32
PCNX1-209ENST00000554879 PLB1Q6P1J6 1458 aa23.25■■□□□ 1.31
PCNX1-209ENST00000554879 CTTNBP2Q8WZ74 1663 aa23.24■■□□□ 1.31
PCNX1-209ENST00000554879 OSCARQ8IYS5 282 aa23.24■■□□□ 1.31
PCNX1-209ENST00000554879 DDX10Q13206 875 aaKnown RBP23.24■■□□□ 1.31
PCNX1-209ENST00000554879 EPRSP07814 1512 aaKnown RBP23.23■■□□□ 1.31
PCNX1-209ENST00000554879 PBRM1Q86U86 1689 aa23.21■■□□□ 1.31
PCNX1-209ENST00000554879 KDM2AQ9Y2K7 1162 aa23.21■■□□□ 1.31
PCNX1-209ENST00000554879 MIER1Q8N108 512 aa23.17■■□□□ 1.3
PCNX1-209ENST00000554879 HECW1Q76N89 1606 aa23.16■■□□□ 1.3
PCNX1-209ENST00000554879 MPHOSPH9Q99550 1183 aa23.16■■□□□ 1.3
PCNX1-209ENST00000554879 MAP3K1Q13233 1512 aa23.14■■□□□ 1.29
PCNX1-209ENST00000554879 EHBP1L1Q8N3D4 1523 aa23.13■■□□□ 1.29
PCNX1-209ENST00000554879 RGL3Q3MIN7 710 aa23.11■■□□□ 1.29
PCNX1-209ENST00000554879 EFCAB2Q5VUJ9 269 aa23.1■■□□□ 1.29
PCNX1-209ENST00000554879 PKD2Q13563 968 aa23.08■■□□□ 1.29
PCNX1-209ENST00000554879 WDR97A6NE52 1622 aa23.08■■□□□ 1.28
PCNX1-209ENST00000554879 TROQ12816 1431 aaPredicted RBP23.07■■□□□ 1.28
PCNX1-209ENST00000554879 ANKRD30AQ9BXX3 1397 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms