RNA–Protein interactions for RNA: ENST00000554813.5

APEX1-208, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 3

Gene APEX1, Length 654 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-208ENST00000554813 KIAA0586Q9BVV6 1533 aa22.28■■□□□ 1.16
APEX1-208ENST00000554813 PRG4Q92954 1404 aaPredicted RBP22.26■■□□□ 1.15
APEX1-208ENST00000554813 RAPGEF2Q9Y4G8 1499 aa22.25■■□□□ 1.15
APEX1-208ENST00000554813 ERCC6L2Q5T890 1561 aa22.23■■□□□ 1.15
APEX1-208ENST00000554813 CHIC1Q5VXU3 224 aa22.18■■□□□ 1.14
APEX1-208ENST00000554813 CSRNP3Q8WYN3 585 aa22.16■■□□□ 1.14
APEX1-208ENST00000554813 EEA1Q15075 1411 aa22.13■■□□□ 1.13
APEX1-208ENST00000554813 PRXQ9BXM0 1461 aa22.12■■□□□ 1.13
APEX1-208ENST00000554813 IQGAP2Q13576 1575 aa22.1■■□□□ 1.13
APEX1-208ENST00000554813 CARMIL2Q6F5E8 1435 aa22.08■■□□□ 1.13
APEX1-208ENST00000554813 TRHP20396 242 aaPredicted RBP22.08■■□□□ 1.13
APEX1-208ENST00000554813 FAM9AQ8IZU1 332 aaPredicted RBP22.05■■□□□ 1.12
APEX1-208ENST00000554813 PTPRGP23470 1445 aa22.01■■□□□ 1.11
APEX1-208ENST00000554813 TNIKQ9UKE5 1360 aa21.99■■□□□ 1.11
APEX1-208ENST00000554813 NPM1P06748 294 aaKnown RBP eCLIP21.99■■□□□ 1.11
APEX1-208ENST00000554813 UGGT2Q9NYU1 1516 aa21.98■■□□□ 1.11
APEX1-208ENST00000554813 TTBK1Q5TCY1 1321 aaPredicted RBP21.98■■□□□ 1.11
APEX1-208ENST00000554813 CTTNBP2Q8WZ74 1663 aa21.96■■□□□ 1.11
APEX1-208ENST00000554813 DISP1Q96F81 1524 aa21.96■■□□□ 1.11
APEX1-208ENST00000554813 GOLGA3Q08378 1498 aa21.9■■□□□ 1.1
APEX1-208ENST00000554813 KIAA0556O60303 1618 aa21.87■■□□□ 1.09
APEX1-208ENST00000554813 ADCY10Q96PN6 1610 aa21.87■■□□□ 1.09
APEX1-208ENST00000554813 KIF21BO75037 1637 aa21.84■■□□□ 1.09
APEX1-208ENST00000554813 UACAQ9BZF9 1416 aa21.83■■□□□ 1.09
APEX1-208ENST00000554813 UHRF1BP1LA0JNW5 1464 aa21.8■■□□□ 1.08
APEX1-208ENST00000554813 UBTFP17480 764 aaKnown RBP21.78■■□□□ 1.08
APEX1-208ENST00000554813 P3H3Q8IVL6 736 aa21.78■■□□□ 1.08
APEX1-208ENST00000554813 ABCC2Q92887 1545 aa21.78■■□□□ 1.08
APEX1-208ENST00000554813 MAPKBP1O60336 1514 aa21.77■■□□□ 1.08
APEX1-208ENST00000554813 RANGAP1P46060 587 aaPredicted RBP21.76■■□□□ 1.07
APEX1-208ENST00000554813 EHMT2Q96KQ7 1210 aa21.76■■□□□ 1.07
APEX1-208ENST00000554813 FAM69CQ0P6D2 419 aa21.73■■□□□ 1.07
APEX1-208ENST00000554813 ABCC10Q5T3U5 1492 aa21.71■■□□□ 1.07
APEX1-208ENST00000554813 PLB1Q6P1J6 1458 aa21.7■■□□□ 1.06
APEX1-208ENST00000554813 KDM5BQ9UGL1 1544 aa21.69■■□□□ 1.06
APEX1-208ENST00000554813 SAMD9Q5K651 1589 aa21.69■■□□□ 1.06
APEX1-208ENST00000554813 ASXL2Q76L83 1435 aa21.66■■□□□ 1.06
APEX1-208ENST00000554813 KIF13AQ9H1H9 1805 aa21.65■■□□□ 1.06
APEX1-208ENST00000554813 ABCA8O94911 1581 aa21.65■■□□□ 1.06
APEX1-208ENST00000554813 DIP2BQ9P265 1576 aa21.61■■□□□ 1.05
APEX1-208ENST00000554813 EFCAB5A4FU69 1503 aa21.61■■□□□ 1.05
APEX1-208ENST00000554813 ZCCHC11Q5TAX3 1644 aaKnown RBP21.6■■□□□ 1.05
APEX1-208ENST00000554813 FHOD3Q2V2M9 1422 aa21.59■■□□□ 1.05
APEX1-208ENST00000554813 ARID3CA6NKF2 412 aa21.54■■□□□ 1.04
APEX1-208ENST00000554813 WDR7Q9Y4E6 1490 aa21.52■■□□□ 1.04
APEX1-208ENST00000554813 RAPGEF6Q8TEU7 1601 aa21.52■■□□□ 1.04
APEX1-208ENST00000554813 GLI2P10070 1586 aa21.52■■□□□ 1.04
APEX1-208ENST00000554813 ATP10BO94823 1461 aa21.52■■□□□ 1.03
APEX1-208ENST00000554813 EPRSP07814 1512 aaKnown RBP21.51■■□□□ 1.03
APEX1-208ENST00000554813 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.51■■□□□ 1.03
APEX1-208ENST00000554813 HNRNPUL2Q1KMD3 747 aaKnown RBP21.51■■□□□ 1.03
APEX1-208ENST00000554813 KCNH8Q96L42 1107 aa21.5■■□□□ 1.03
APEX1-208ENST00000554813 ARHGAP35Q9NRY4 1499 aa21.48■■□□□ 1.03
APEX1-208ENST00000554813 FMN1Q68DA7 1419 aa21.46■■□□□ 1.03
APEX1-208ENST00000554813 NUP153P49790 1475 aaKnown RBP21.45■■□□□ 1.03
APEX1-208ENST00000554813 TSPOAP1O95153 1857 aa21.45■■□□□ 1.02
APEX1-208ENST00000554813 ATP1B4Q9UN42 357 aaPredicted RBP21.42■■□□□ 1.02
APEX1-208ENST00000554813 PLEKHD1A6NEE1 506 aa21.41■■□□□ 1.02
APEX1-208ENST00000554813 MAP3K4Q9Y6R4 1608 aa21.39■■□□□ 1.01
APEX1-208ENST00000554813 CD109Q6YHK3 1445 aa21.38■■□□□ 1.01
APEX1-208ENST00000554813 TEX14Q8IWB6 1497 aa21.37■■□□□ 1.01
APEX1-208ENST00000554813 CLIP1P30622 1438 aa21.36■■□□□ 1.01
APEX1-208ENST00000554813 PPRC1Q5VV67 1664 aaKnown RBP21.33■■□□□ 1
APEX1-208ENST00000554813 KDM6BO15054 1643 aa21.33■■□□□ 1
APEX1-208ENST00000554813 CFAP43Q8NDM7 1665 aa21.32■■□□□ 1
APEX1-208ENST00000554813 HECW1Q76N89 1606 aa21.31■■□□□ 1
APEX1-208ENST00000554813 CDK11AQ9UQ88 783 aaPredicted RBP21.31■■□□□ 1
APEX1-208ENST00000554813 MAGI3Q5TCQ9 1506 aa21.3■■□□□ 1
APEX1-208ENST00000554813 LOC105371045A0A1W2PR82 267 aa21.29■■□□□ 1
APEX1-208ENST00000554813 CDK13Q14004 1512 aaKnown RBP21.27■■□□□ 1
APEX1-208ENST00000554813 ABCA9Q8IUA7 1624 aa21.26■□□□□ 0.99
APEX1-208ENST00000554813 CASKIN1Q8WXD9 1431 aa21.26■□□□□ 0.99
APEX1-208ENST00000554813 CEP162Q5TB80 1403 aa21.22■□□□□ 0.99
APEX1-208ENST00000554813 PHLDB1Q86UU1 1377 aa21.21■□□□□ 0.99
APEX1-208ENST00000554813 COL17A1Q9UMD9 1497 aaPredicted RBP21.2■□□□□ 0.98
APEX1-208ENST00000554813 FYCO1Q9BQS8 1478 aa21.19■□□□□ 0.98
APEX1-208ENST00000554813 PCF11O94913 1555 aaKnown RBP21.19■□□□□ 0.98
APEX1-208ENST00000554813 CCDC18Q5T9S5 1454 aa21.18■□□□□ 0.98
APEX1-208ENST00000554813 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.16■□□□□ 0.98
APEX1-208ENST00000554813 TROQ12816 1431 aaPredicted RBP21.15■□□□□ 0.98
APEX1-208ENST00000554813 NEO1Q92859 1461 aa21.14■□□□□ 0.98
APEX1-208ENST00000554813 ARAP3Q8WWN8 1544 aa21.14■□□□□ 0.97
APEX1-208ENST00000554813 LRRIQ1Q96JM4 1722 aa21.12■□□□□ 0.97
APEX1-208ENST00000554813 TTC37Q6PGP7 1564 aa21.09■□□□□ 0.97
APEX1-208ENST00000554813 FANCAO15360 1455 aa21.08■□□□□ 0.97
APEX1-208ENST00000554813 PLCH2O75038 1416 aa21.08■□□□□ 0.97
APEX1-208ENST00000554813 KIF14Q15058 1648 aa21.07■□□□□ 0.96
APEX1-208ENST00000554813 AKNAQ7Z591 1439 aa21.06■□□□□ 0.96
APEX1-208ENST00000554813 EFCAB2Q5VUJ9 269 aa21.06■□□□□ 0.96
APEX1-208ENST00000554813 RAPGEF3O95398 923 aa21.05■□□□□ 0.96
APEX1-208ENST00000554813 AEBP2Q6ZN18 517 aaPredicted RBP21.05■□□□□ 0.96
APEX1-208ENST00000554813 CFAP74Q9C0B2 1584 aa21.04■□□□□ 0.96
APEX1-208ENST00000554813 DENND4BO75064 1496 aaPredicted RBP21.01■□□□□ 0.95
APEX1-208ENST00000554813 MYO5CQ9NQX4 1742 aa21■□□□□ 0.95
APEX1-208ENST00000554813 MTUS2Q5JR59 1369 aa20.99■□□□□ 0.95
APEX1-208ENST00000554813 VPS8Q8N3P4 1428 aa20.98■□□□□ 0.95
APEX1-208ENST00000554813 ADGRL1O94910 1474 aa20.96■□□□□ 0.95
APEX1-208ENST00000554813 ARHGAP5Q13017 1502 aa20.96■□□□□ 0.95
APEX1-208ENST00000554813 SCAPERQ9BY12 1400 aa20.95■□□□□ 0.95
APEX1-208ENST00000554813 KDM4FA0A1W2PPD8 638 aa20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms