RNA–Protein interactions for RNA: ENST00000554402.6

ACTR10-204, Transcript of actin related protein 10 homolog, humanhuman

TSL 1 (best)

Gene ACTR10, Length 1,544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTR10-204ENST00000554402 SHROOM2Q13796 1616 aa32.06■■■□□ 2.72
ACTR10-204ENST00000554402 KIF21BO75037 1637 aa32.05■■■□□ 2.72
ACTR10-204ENST00000554402 RIMBP3CA6NJZ7 1639 aa32.03■■■□□ 2.72
ACTR10-204ENST00000554402 RIMBP3BA6NNM3 1639 aa32.03■■■□□ 2.72
ACTR10-204ENST00000554402 RIMBP3Q9UFD9 1639 aa32.03■■■□□ 2.72
ACTR10-204ENST00000554402 JPH4Q96JJ6 628 aa32.01■■■□□ 2.72
ACTR10-204ENST00000554402 IQGAP2Q13576 1575 aa31.97■■■□□ 2.71
ACTR10-204ENST00000554402 CTTNBP2Q8WZ74 1663 aa31.95■■■□□ 2.71
ACTR10-204ENST00000554402 PRG4Q92954 1404 aaPredicted RBP31.91■■■□□ 2.7
ACTR10-204ENST00000554402 ERCC6L2Q5T890 1561 aa31.91■■■□□ 2.7
ACTR10-204ENST00000554402 GOLGA3Q08378 1498 aa31.88■■■□□ 2.69
ACTR10-204ENST00000554402 ARAP1Q96P48 1450 aa31.84■■■□□ 2.69
ACTR10-204ENST00000554402 UGGT2Q9NYU1 1516 aa31.83■■■□□ 2.69
ACTR10-204ENST00000554402 EHMT2Q96KQ7 1210 aa31.8■■■□□ 2.68
ACTR10-204ENST00000554402 DISP1Q96F81 1524 aa31.76■■■□□ 2.67
ACTR10-204ENST00000554402 UBTFP17480 764 aaKnown RBP31.75■■■□□ 2.67
ACTR10-204ENST00000554402 CYB5RLQ6IPT4 315 aa31.74■■■□□ 2.67
ACTR10-204ENST00000554402 CARMIL2Q6F5E8 1435 aa31.73■■■□□ 2.67
ACTR10-204ENST00000554402 KIAA0556O60303 1618 aa31.68■■■□□ 2.66
ACTR10-204ENST00000554402 TNIKQ9UKE5 1360 aa31.62■■■□□ 2.65
ACTR10-204ENST00000554402 SAMD9Q5K651 1589 aa31.59■■■□□ 2.65
ACTR10-204ENST00000554402 PTPRGP23470 1445 aa31.57■■■□□ 2.64
ACTR10-204ENST00000554402 RANGAP1P46060 587 aaPredicted RBP31.54■■■□□ 2.64
ACTR10-204ENST00000554402 EFCAB5A4FU69 1503 aa31.49■■■□□ 2.63
ACTR10-204ENST00000554402 LOC105371045A0A1W2PR82 267 aa31.49■■■□□ 2.63
ACTR10-204ENST00000554402 P3H3Q8IVL6 736 aa31.49■■■□□ 2.63
ACTR10-204ENST00000554402 TTBK1Q5TCY1 1321 aaPredicted RBP31.48■■■□□ 2.63
ACTR10-204ENST00000554402 ARHGAP35Q9NRY4 1499 aa31.42■■■□□ 2.62
ACTR10-204ENST00000554402 FHOD3Q2V2M9 1422 aa31.4■■■□□ 2.62
ACTR10-204ENST00000554402 ADCY10Q96PN6 1610 aa31.4■■■□□ 2.62
ACTR10-204ENST00000554402 UACAQ9BZF9 1416 aa31.38■■■□□ 2.61
ACTR10-204ENST00000554402 UHRF1BP1LA0JNW5 1464 aa31.35■■■□□ 2.61
ACTR10-204ENST00000554402 PLB1Q6P1J6 1458 aa31.34■■■□□ 2.61
ACTR10-204ENST00000554402 ABCA8O94911 1581 aa31.32■■■□□ 2.6
ACTR10-204ENST00000554402 ABCC2Q92887 1545 aa31.32■■■□□ 2.6
ACTR10-204ENST00000554402 CLIP1P30622 1438 aa31.31■■■□□ 2.6
ACTR10-204ENST00000554402 CEP162Q5TB80 1403 aa31.26■■■□□ 2.59
ACTR10-204ENST00000554402 NPM1P06748 294 aaKnown RBP eCLIP31.2■■■□□ 2.59
ACTR10-204ENST00000554402 FMN1Q68DA7 1419 aa31.2■■■□□ 2.59
ACTR10-204ENST00000554402 RAPGEF6Q8TEU7 1601 aa31.2■■■□□ 2.58
ACTR10-204ENST00000554402 KDM5BQ9UGL1 1544 aa31.2■■■□□ 2.58
ACTR10-204ENST00000554402 MAPKBP1O60336 1514 aa31.13■■■□□ 2.57
ACTR10-204ENST00000554402 ZCCHC11Q5TAX3 1644 aaKnown RBP31.12■■■□□ 2.57
ACTR10-204ENST00000554402 NUP153P49790 1475 aaKnown RBP31.11■■■□□ 2.57
ACTR10-204ENST00000554402 ATP10BO94823 1461 aa31.07■■■□□ 2.56
ACTR10-204ENST00000554402 ASXL2Q76L83 1435 aa31.02■■■□□ 2.56
ACTR10-204ENST00000554402 ARID3CA6NKF2 412 aa31.02■■■□□ 2.56
ACTR10-204ENST00000554402 CASKIN1Q8WXD9 1431 aa31.01■■■□□ 2.55
ACTR10-204ENST00000554402 HECW1Q76N89 1606 aa31■■■□□ 2.55
ACTR10-204ENST00000554402 PCF11O94913 1555 aaKnown RBP31■■■□□ 2.55
ACTR10-204ENST00000554402 ABCC10Q5T3U5 1492 aa30.95■■■□□ 2.54
ACTR10-204ENST00000554402 TRHP20396 242 aaPredicted RBP30.94■■■□□ 2.54
ACTR10-204ENST00000554402 ATP1B4Q9UN42 357 aaPredicted RBP30.94■■■□□ 2.54
ACTR10-204ENST00000554402 FYCO1Q9BQS8 1478 aa30.94■■■□□ 2.54
ACTR10-204ENST00000554402 EPRSP07814 1512 aaKnown RBP30.94■■■□□ 2.54
ACTR10-204ENST00000554402 WDR7Q9Y4E6 1490 aa30.92■■■□□ 2.54
ACTR10-204ENST00000554402 CDK13Q14004 1512 aaKnown RBP30.92■■■□□ 2.54
ACTR10-204ENST00000554402 LRRIQ1Q96JM4 1722 aa30.9■■■□□ 2.54
ACTR10-204ENST00000554402 DIP2BQ9P265 1576 aa30.9■■■□□ 2.54
ACTR10-204ENST00000554402 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.9■■■□□ 2.54
ACTR10-204ENST00000554402 HNRNPUL2Q1KMD3 747 aaKnown RBP30.9■■■□□ 2.54
ACTR10-204ENST00000554402 KIF13AQ9H1H9 1805 aa30.88■■■□□ 2.53
ACTR10-204ENST00000554402 VPS8Q8N3P4 1428 aa30.86■■■□□ 2.53
ACTR10-204ENST00000554402 FAM69CQ0P6D2 419 aa30.83■■■□□ 2.53
ACTR10-204ENST00000554402 CCDC18Q5T9S5 1454 aa30.83■■■□□ 2.53
ACTR10-204ENST00000554402 GLI2P10070 1586 aa30.8■■■□□ 2.52
ACTR10-204ENST00000554402 PLEKHD1A6NEE1 506 aa30.79■■■□□ 2.52
ACTR10-204ENST00000554402 KCNH8Q96L42 1107 aa30.76■■■□□ 2.51
ACTR10-204ENST00000554402 CDK11AQ9UQ88 783 aaPredicted RBP30.73■■■□□ 2.51
ACTR10-204ENST00000554402 MAP3K4Q9Y6R4 1608 aa30.68■■■□□ 2.5
ACTR10-204ENST00000554402 MAGI3Q5TCQ9 1506 aa30.67■■■□□ 2.5
ACTR10-204ENST00000554402 TROQ12816 1431 aaPredicted RBP30.67■■■□□ 2.5
ACTR10-204ENST00000554402 ABCA9Q8IUA7 1624 aa30.64■■■□□ 2.5
ACTR10-204ENST00000554402 CFAP43Q8NDM7 1665 aa30.63■■■□□ 2.49
ACTR10-204ENST00000554402 CD109Q6YHK3 1445 aa30.6■■■□□ 2.49
ACTR10-204ENST00000554402 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.6■■■□□ 2.49
ACTR10-204ENST00000554402 TIAM1Q13009 1591 aa30.59■■■□□ 2.49
ACTR10-204ENST00000554402 TSPOAP1O95153 1857 aa30.59■■■□□ 2.49
ACTR10-204ENST00000554402 PPRC1Q5VV67 1664 aaKnown RBP30.58■■■□□ 2.49
ACTR10-204ENST00000554402 KIF14Q15058 1648 aa30.58■■■□□ 2.49
ACTR10-204ENST00000554402 MAP3K1Q13233 1512 aa30.57■■■□□ 2.49
ACTR10-204ENST00000554402 TTC37Q6PGP7 1564 aa30.54■■■□□ 2.48
ACTR10-204ENST00000554402 MTUS2Q5JR59 1369 aa30.53■■■□□ 2.48
ACTR10-204ENST00000554402 EHBP1L1Q8N3D4 1523 aa30.5■■■□□ 2.47
ACTR10-204ENST00000554402 TEX14Q8IWB6 1497 aa30.48■■■□□ 2.47
ACTR10-204ENST00000554402 LRRC9Q6ZRR7 1453 aa30.47■■■□□ 2.47
ACTR10-204ENST00000554402 APLP2Q06481 763 aa30.44■■■□□ 2.46
ACTR10-204ENST00000554402 KANK4Q5T7N3 995 aaPredicted RBP30.44■■■□□ 2.46
ACTR10-204ENST00000554402 PLCH2O75038 1416 aa30.42■■■□□ 2.46
ACTR10-204ENST00000554402 MYO5CQ9NQX4 1742 aa30.39■■■□□ 2.46
ACTR10-204ENST00000554402 ARAP3Q8WWN8 1544 aa30.37■■■□□ 2.45
ACTR10-204ENST00000554402 SUPT6HQ7KZ85 1726 aaKnown RBP30.35■■■□□ 2.45
ACTR10-204ENST00000554402 NEO1Q92859 1461 aa30.35■■■□□ 2.45
ACTR10-204ENST00000554402 FANCAO15360 1455 aa30.34■■■□□ 2.45
ACTR10-204ENST00000554402 NCOA2Q15596 1464 aa30.33■■■□□ 2.45
ACTR10-204ENST00000554402 CDC42BPAQ5VT25 1732 aa30.33■■■□□ 2.45
ACTR10-204ENST00000554402 PREX2Q70Z35 1606 aa30.33■■■□□ 2.45
ACTR10-204ENST00000554402 GPATCH8Q9UKJ3 1502 aaKnown RBP30.32■■■□□ 2.44
ACTR10-204ENST00000554402 CDC42BPBQ9Y5S2 1711 aa30.32■■■□□ 2.44
ACTR10-204ENST00000554402 PHLDB1Q86UU1 1377 aa30.31■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 108.6 ms