RNA–Protein interactions for RNA: ENST00000554402.6

ACTR10-204, Transcript of actin related protein 10 homolog, humanhuman

TSL 1 (best)

Gene ACTR10, Length 1,544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTR10-204ENST00000554402 NISCHQ9Y2I1 1504 aa46.54■■■■■ 5.04
ACTR10-204ENST00000554402 CCDC180Q9P1Z9 1646 aa41.2■■■■■ 4.19
ACTR10-204ENST00000554402 ABCC9O60706 1549 aa39.96■■■■□ 3.99
ACTR10-204ENST00000554402 ZCCHC6Q5VYS8 1495 aaKnown RBP38.85■■■■□ 3.81
ACTR10-204ENST00000554402 DCAF8L2P0C7V8 631 aa38.68■■■■□ 3.78
ACTR10-204ENST00000554402 NACADO15069 1562 aa38.65■■■■□ 3.78
ACTR10-204ENST00000554402 RB1CC1Q8TDY2 1594 aa38.59■■■■□ 3.77
ACTR10-204ENST00000554402 MYO15BQ96JP2 1530 aa38.57■■■■□ 3.77
ACTR10-204ENST00000554402 DCAF1Q9Y4B6 1507 aa38.54■■■■□ 3.76
ACTR10-204ENST00000554402 UNC13AQ9UPW8 1703 aa37.76■■■■□ 3.63
ACTR10-204ENST00000554402 SCRIBQ14160 1630 aa37.61■■■■□ 3.61
ACTR10-204ENST00000554402 BICRAQ9NZM4 1560 aa37.46■■■■□ 3.59
ACTR10-204ENST00000554402 PABPN1Q86U42 306 aaKnown RBP eCLIP37.41■■■■□ 3.58
ACTR10-204ENST00000554402 SHROOM4Q9ULL8 1493 aa37.07■■■■□ 3.52
ACTR10-204ENST00000554402 EIF4G1Q04637 1599 aaKnown RBP36.43■■■■□ 3.42
ACTR10-204ENST00000554402 DNAJC5BQ9UF47 199 aa36.4■■■■□ 3.42
ACTR10-204ENST00000554402 CECR2Q9BXF3 1484 aa36.23■■■■□ 3.39
ACTR10-204ENST00000554402 CC2D2AQ9P2K1 1620 aa36.18■■■■□ 3.38
ACTR10-204ENST00000554402 BAZ1AQ9NRL2 1556 aaPredicted RBP36.03■■■■□ 3.36
ACTR10-204ENST00000554402 SMARCA4P51532 1647 aa36.03■■■■□ 3.36
ACTR10-204ENST00000554402 MROH2BQ7Z745 1585 aa35.88■■■■□ 3.33
ACTR10-204ENST00000554402 ATAD2BQ9ULI0 1458 aa35.75■■■■□ 3.31
ACTR10-204ENST00000554402 SMARCA2P51531 1590 aa35.7■■■■□ 3.31
ACTR10-204ENST00000554402 PEG3Q9GZU2 1588 aa35.7■■■■□ 3.3
ACTR10-204ENST00000554402 NCAPD3P42695 1498 aa35.69■■■■□ 3.3
ACTR10-204ENST00000554402 RSF1Q96T23 1441 aaPredicted RBP35.6■■■■□ 3.29
ACTR10-204ENST00000554402 HMGXB3Q12766 1538 aa35.53■■■■□ 3.28
ACTR10-204ENST00000554402 WIZO95785 1651 aa35.51■■■■□ 3.27
ACTR10-204ENST00000554402 BAZ1BQ9UIG0 1483 aaKnown RBP35.45■■■■□ 3.27
ACTR10-204ENST00000554402 TOP2AP11388 1531 aaKnown RBP35.13■■■■□ 3.21
ACTR10-204ENST00000554402 SUPT5HO00267 1087 aaKnown RBP34.91■■■■□ 3.18
ACTR10-204ENST00000554402 CCDC88BA6NC98 1476 aa34.73■■■■□ 3.15
ACTR10-204ENST00000554402 NESP48681 1621 aa34.71■■■■□ 3.15
ACTR10-204ENST00000554402 LAMC3Q9Y6N6 1575 aa34.67■■■■□ 3.14
ACTR10-204ENST00000554402 CADPSQ9ULU8 1353 aa34.65■■■■□ 3.14
ACTR10-204ENST00000554402 CFTRP13569 1480 aa34.54■■■■□ 3.12
ACTR10-204ENST00000554402 PDS5BQ9NTI5 1447 aa34.41■■■■□ 3.1
ACTR10-204ENST00000554402 ERCC6Q03468 1493 aa34.39■■■■□ 3.1
ACTR10-204ENST00000554402 KIF21AQ7Z4S6 1674 aa34.3■■■■□ 3.08
ACTR10-204ENST00000554402 PRDM2Q13029 1718 aa34.27■■■■□ 3.08
ACTR10-204ENST00000554402 FANCD2Q9BXW9 1451 aa34.25■■■■□ 3.07
ACTR10-204ENST00000554402 CEP164Q9UPV0 1460 aa34.16■■■■□ 3.06
ACTR10-204ENST00000554402 THOC2Q8NI27 1593 aaKnown RBP34.1■■■■□ 3.05
ACTR10-204ENST00000554402 MRC2Q9UBG0 1479 aa34.04■■■■□ 3.04
ACTR10-204ENST00000554402 WDR62O43379 1518 aa33.94■■■■□ 3.02
ACTR10-204ENST00000554402 CUX2O14529 1486 aa33.93■■■■□ 3.02
ACTR10-204ENST00000554402 URB2Q14146 1524 aaKnown RBP33.89■■■■□ 3.02
ACTR10-204ENST00000554402 ABCC8Q09428 1581 aa33.75■■■□□ 2.99
ACTR10-204ENST00000554402 TOPBP1Q92547 1522 aa33.74■■■□□ 2.99
ACTR10-204ENST00000554402 DNMBPQ6XZF7 1577 aa33.73■■■□□ 2.99
ACTR10-204ENST00000554402 CUX1P39880 1505 aa33.63■■■□□ 2.97
ACTR10-204ENST00000554402 WRNQ14191 1432 aaPredicted RBP eCLIP33.54■■■□□ 2.96
ACTR10-204ENST00000554402 POLA1P09884 1462 aaPredicted RBP33.49■■■□□ 2.95
ACTR10-204ENST00000554402 FGD5Q6ZNL6 1462 aa33.45■■■□□ 2.94
ACTR10-204ENST00000554402 SYNJ1O43426 1573 aa33.44■■■□□ 2.94
ACTR10-204ENST00000554402 TOP2BQ02880 1626 aa33.44■■■□□ 2.94
ACTR10-204ENST00000554402 IFT140Q96RY7 1462 aa33.43■■■□□ 2.94
ACTR10-204ENST00000554402 BIVM-ERCC5R4GMW8 1640 aa33.42■■■□□ 2.94
ACTR10-204ENST00000554402 TARBP1Q13395 1621 aaKnown RBP33.36■■■□□ 2.93
ACTR10-204ENST00000554402 SOGA1O94964 1423 aa33.34■■■□□ 2.93
ACTR10-204ENST00000554402 RAD54L2Q9Y4B4 1467 aa33.33■■■□□ 2.93
ACTR10-204ENST00000554402 ZNF608Q9ULD9 1512 aaPredicted RBP33.27■■■□□ 2.92
ACTR10-204ENST00000554402 WDR97A6NE52 1622 aa33.17■■■□□ 2.9
ACTR10-204ENST00000554402 ABCA10Q8WWZ4 1543 aa33.15■■■□□ 2.9
ACTR10-204ENST00000554402 EIF4G3O43432 1585 aaKnown RBP33.14■■■□□ 2.9
ACTR10-204ENST00000554402 AQRO60306 1485 aaKnown RBP eCLIP33.12■■■□□ 2.89
ACTR10-204ENST00000554402 TDRD9Q8NDG6 1382 aaKnown RBP33.11■■■□□ 2.89
ACTR10-204ENST00000554402 ABCA5Q8WWZ7 1642 aa32.99■■■□□ 2.87
ACTR10-204ENST00000554402 GAPVD1Q14C86 1478 aa32.97■■■□□ 2.87
ACTR10-204ENST00000554402 TRIM41Q8WV44 630 aa32.97■■■□□ 2.87
ACTR10-204ENST00000554402 GRIN2BQ13224 1484 aa32.9■■■□□ 2.86
ACTR10-204ENST00000554402 PBRM1Q86U86 1689 aa32.86■■■□□ 2.85
ACTR10-204ENST00000554402 CHIC1Q5VXU3 224 aa32.83■■■□□ 2.85
ACTR10-204ENST00000554402 SNAPC4Q5SXM2 1469 aa32.82■■■□□ 2.84
ACTR10-204ENST00000554402 KIF27Q86VH2 1401 aa32.8■■■□□ 2.84
ACTR10-204ENST00000554402 MAGI1Q96QZ7 1491 aaPredicted RBP32.79■■■□□ 2.84
ACTR10-204ENST00000554402 ERICH3Q5RHP9 1530 aa32.76■■■□□ 2.83
ACTR10-204ENST00000554402 SYNJ2O15056 1496 aa32.66■■■□□ 2.82
ACTR10-204ENST00000554402 IGF1RP08069 1367 aa32.65■■■□□ 2.82
ACTR10-204ENST00000554402 RUSC2Q8N2Y8 1516 aa32.65■■■□□ 2.82
ACTR10-204ENST00000554402 CHD1O14646 1710 aa32.64■■■□□ 2.82
ACTR10-204ENST00000554402 ADAMTS12P58397 1594 aa32.64■■■□□ 2.82
ACTR10-204ENST00000554402 FBLN2P98095 1184 aa32.61■■■□□ 2.81
ACTR10-204ENST00000554402 CHMP7Q8WUX9 453 aaPredicted RBP32.6■■■□□ 2.81
ACTR10-204ENST00000554402 FHAD1B1AJZ9 1412 aa32.59■■■□□ 2.81
ACTR10-204ENST00000554402 OSCARQ8IYS5 282 aa32.59■■■□□ 2.81
ACTR10-204ENST00000554402 CUL7Q14999 1698 aa32.51■■■□□ 2.8
ACTR10-204ENST00000554402 GRIN2AQ12879 1464 aa32.49■■■□□ 2.79
ACTR10-204ENST00000554402 DNAJC5Q9H3Z4 198 aa32.48■■■□□ 2.79
ACTR10-204ENST00000554402 CARMIL1Q5VZK9 1371 aa32.44■■■□□ 2.78
ACTR10-204ENST00000554402 EEA1Q15075 1411 aa32.41■■■□□ 2.78
ACTR10-204ENST00000554402 NUP160Q12769 1436 aa32.35■■■□□ 2.77
ACTR10-204ENST00000554402 CLASP1Q7Z460 1538 aa32.33■■■□□ 2.77
ACTR10-204ENST00000554402 CEP170Q5SW79 1584 aa32.32■■■□□ 2.77
ACTR10-204ENST00000554402 CSRNP3Q8WYN3 585 aa32.32■■■□□ 2.76
ACTR10-204ENST00000554402 PRXQ9BXM0 1461 aa32.29■■■□□ 2.76
ACTR10-204ENST00000554402 RAPGEF2Q9Y4G8 1499 aa32.29■■■□□ 2.76
ACTR10-204ENST00000554402 FAM9AQ8IZU1 332 aaPredicted RBP32.26■■■□□ 2.76
ACTR10-204ENST00000554402 KIAA0586Q9BVV6 1533 aa32.12■■■□□ 2.73
ACTR10-204ENST00000554402 ARHGEF11O15085 1522 aa32.07■■■□□ 2.72
Retrieved 100 of 20,778 RNA–protein pairs in 1641.5 ms