RNA–Protein interactions for RNA: ENST00000554365.1

SPTLC2-202, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 2

Gene SPTLC2, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-202ENST00000554365 KIF13AQ9H1H9 1805 aa24.43■■□□□ 1.5
SPTLC2-202ENST00000554365 NPM1P06748 294 aaKnown RBP eCLIP24.4■■□□□ 1.5
SPTLC2-202ENST00000554365 IGF1RP08069 1367 aa24.37■■□□□ 1.49
SPTLC2-202ENST00000554365 KIF27Q86VH2 1401 aa24.36■■□□□ 1.49
SPTLC2-202ENST00000554365 FAM69CQ0P6D2 419 aa24.35■■□□□ 1.49
SPTLC2-202ENST00000554365 KIAA0586Q9BVV6 1533 aa24.35■■□□□ 1.49
SPTLC2-202ENST00000554365 CUL7Q14999 1698 aa24.33■■□□□ 1.49
SPTLC2-202ENST00000554365 ABCC10Q5T3U5 1492 aa24.32■■□□□ 1.48
SPTLC2-202ENST00000554365 ADCY10Q96PN6 1610 aa24.32■■□□□ 1.48
SPTLC2-202ENST00000554365 MAPKBP1O60336 1514 aa24.3■■□□□ 1.48
SPTLC2-202ENST00000554365 DIP2BQ9P265 1576 aa24.26■■□□□ 1.47
SPTLC2-202ENST00000554365 TTBK1Q5TCY1 1321 aaPredicted RBP24.23■■□□□ 1.47
SPTLC2-202ENST00000554365 CARMIL1Q5VZK9 1371 aa24.22■■□□□ 1.47
SPTLC2-202ENST00000554365 PTPRGP23470 1445 aa24.18■■□□□ 1.46
SPTLC2-202ENST00000554365 CARMIL2Q6F5E8 1435 aa24.14■■□□□ 1.45
SPTLC2-202ENST00000554365 KDM6BO15054 1643 aa24.12■■□□□ 1.45
SPTLC2-202ENST00000554365 TNIKQ9UKE5 1360 aa24.12■■□□□ 1.45
SPTLC2-202ENST00000554365 TSPOAP1O95153 1857 aa24.11■■□□□ 1.45
SPTLC2-202ENST00000554365 IQGAP2Q13576 1575 aa24.1■■□□□ 1.45
SPTLC2-202ENST00000554365 ABCC2Q92887 1545 aa24.06■■□□□ 1.44
SPTLC2-202ENST00000554365 ASXL2Q76L83 1435 aa24.01■■□□□ 1.43
SPTLC2-202ENST00000554365 DISP1Q96F81 1524 aa24■■□□□ 1.43
SPTLC2-202ENST00000554365 UACAQ9BZF9 1416 aa23.99■■□□□ 1.43
SPTLC2-202ENST00000554365 PLB1Q6P1J6 1458 aa23.99■■□□□ 1.43
SPTLC2-202ENST00000554365 UHRF1BP1LA0JNW5 1464 aa23.98■■□□□ 1.43
SPTLC2-202ENST00000554365 RAPGEF2Q9Y4G8 1499 aa23.97■■□□□ 1.43
SPTLC2-202ENST00000554365 KDM4FA0A1W2PPD8 638 aa23.96■■□□□ 1.43
SPTLC2-202ENST00000554365 GLI2P10070 1586 aa23.93■■□□□ 1.42
SPTLC2-202ENST00000554365 UGGT2Q9NYU1 1516 aa23.92■■□□□ 1.42
SPTLC2-202ENST00000554365 PPRC1Q5VV67 1664 aaKnown RBP23.89■■□□□ 1.42
SPTLC2-202ENST00000554365 KIAA0556O60303 1618 aa23.88■■□□□ 1.41
SPTLC2-202ENST00000554365 KDM5BQ9UGL1 1544 aa23.88■■□□□ 1.41
SPTLC2-202ENST00000554365 EPRSP07814 1512 aaKnown RBP23.85■■□□□ 1.41
SPTLC2-202ENST00000554365 ZCCHC11Q5TAX3 1644 aaKnown RBP23.85■■□□□ 1.41
SPTLC2-202ENST00000554365 MAP3K4Q9Y6R4 1608 aa23.81■■□□□ 1.4
SPTLC2-202ENST00000554365 CTTNBP2Q8WZ74 1663 aa23.78■■□□□ 1.4
SPTLC2-202ENST00000554365 TEX14Q8IWB6 1497 aa23.77■■□□□ 1.4
SPTLC2-202ENST00000554365 COL17A1Q9UMD9 1497 aaPredicted RBP23.77■■□□□ 1.4
SPTLC2-202ENST00000554365 WDR7Q9Y4E6 1490 aa23.75■■□□□ 1.39
SPTLC2-202ENST00000554365 GOLGA3Q08378 1498 aa23.74■■□□□ 1.39
SPTLC2-202ENST00000554365 ADGRL1O94910 1474 aa23.73■■□□□ 1.39
SPTLC2-202ENST00000554365 KCNH8Q96L42 1107 aa23.67■■□□□ 1.38
SPTLC2-202ENST00000554365 ABCA8O94911 1581 aa23.66■■□□□ 1.38
SPTLC2-202ENST00000554365 PRXQ9BXM0 1461 aa23.66■■□□□ 1.38
SPTLC2-202ENST00000554365 CD109Q6YHK3 1445 aa23.63■■□□□ 1.37
SPTLC2-202ENST00000554365 CFAP43Q8NDM7 1665 aa23.6■■□□□ 1.37
SPTLC2-202ENST00000554365 MAGI3Q5TCQ9 1506 aa23.59■■□□□ 1.37
SPTLC2-202ENST00000554365 P3H3Q8IVL6 736 aa23.58■■□□□ 1.37
SPTLC2-202ENST00000554365 ARID3CA6NKF2 412 aa23.57■■□□□ 1.36
SPTLC2-202ENST00000554365 FAM9AQ8IZU1 332 aaPredicted RBP23.57■■□□□ 1.36
SPTLC2-202ENST00000554365 ATP10BO94823 1461 aa23.48■■□□□ 1.35
SPTLC2-202ENST00000554365 CHIC1Q5VXU3 224 aa23.47■■□□□ 1.35
SPTLC2-202ENST00000554365 CSRNP3Q8WYN3 585 aa23.47■■□□□ 1.35
SPTLC2-202ENST00000554365 HECW2Q9P2P5 1572 aa23.45■■□□□ 1.34
SPTLC2-202ENST00000554365 ILDR1Q86SU0 546 aaPredicted RBP23.43■■□□□ 1.34
SPTLC2-202ENST00000554365 SAMD9Q5K651 1589 aa23.42■■□□□ 1.34
SPTLC2-202ENST00000554365 KIF21BO75037 1637 aa23.41■■□□□ 1.34
SPTLC2-202ENST00000554365 ARAP3Q8WWN8 1544 aa23.4■■□□□ 1.34
SPTLC2-202ENST00000554365 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.4■■□□□ 1.34
SPTLC2-202ENST00000554365 HNRNPUL2Q1KMD3 747 aaKnown RBP23.4■■□□□ 1.34
SPTLC2-202ENST00000554365 RANGAP1P46060 587 aaPredicted RBP23.39■■□□□ 1.33
SPTLC2-202ENST00000554365 RAPGEF6Q8TEU7 1601 aa23.39■■□□□ 1.33
SPTLC2-202ENST00000554365 ABCA9Q8IUA7 1624 aa23.38■■□□□ 1.33
SPTLC2-202ENST00000554365 PHLDB1Q86UU1 1377 aa23.33■■□□□ 1.33
SPTLC2-202ENST00000554365 RAPGEF3O95398 923 aa23.31■■□□□ 1.32
SPTLC2-202ENST00000554365 EEA1Q15075 1411 aa23.3■■□□□ 1.32
SPTLC2-202ENST00000554365 FHOD3Q2V2M9 1422 aa23.3■■□□□ 1.32
SPTLC2-202ENST00000554365 NUP153P49790 1475 aaKnown RBP23.3■■□□□ 1.32
SPTLC2-202ENST00000554365 NEO1Q92859 1461 aa23.29■■□□□ 1.32
SPTLC2-202ENST00000554365 PLEKHD1A6NEE1 506 aa23.23■■□□□ 1.31
SPTLC2-202ENST00000554365 FRMPD1Q5SYB0 1578 aa23.22■■□□□ 1.31
SPTLC2-202ENST00000554365 ARID4BQ4LE39 1312 aaPredicted RBP23.21■■□□□ 1.31
SPTLC2-202ENST00000554365 PTPRMP28827 1452 aa23.2■■□□□ 1.3
SPTLC2-202ENST00000554365 ADAMTSL3P82987 1691 aa23.19■■□□□ 1.3
SPTLC2-202ENST00000554365 EFCAB5A4FU69 1503 aa23.15■■□□□ 1.3
SPTLC2-202ENST00000554365 DENND4BO75064 1496 aaPredicted RBP23.15■■□□□ 1.3
SPTLC2-202ENST00000554365 BCORL1Q5H9F3 1711 aa23.14■■□□□ 1.3
SPTLC2-202ENST00000554365 AKNAQ7Z591 1439 aa23.14■■□□□ 1.29
SPTLC2-202ENST00000554365 FANCAO15360 1455 aa23.13■■□□□ 1.29
SPTLC2-202ENST00000554365 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.13■■□□□ 1.29
SPTLC2-202ENST00000554365 MADDQ8WXG6 1647 aa23.12■■□□□ 1.29
SPTLC2-202ENST00000554365 CFAP74Q9C0B2 1584 aa23.11■■□□□ 1.29
SPTLC2-202ENST00000554365 EHMT2Q96KQ7 1210 aa23.11■■□□□ 1.29
SPTLC2-202ENST00000554365 ARHGEF40Q8TER5 1519 aa23.1■■□□□ 1.29
SPTLC2-202ENST00000554365 RICTORQ6R327 1708 aa23.1■■□□□ 1.29
SPTLC2-202ENST00000554365 TTC37Q6PGP7 1564 aa23.1■■□□□ 1.29
SPTLC2-202ENST00000554365 CDK13Q14004 1512 aaKnown RBP23.09■■□□□ 1.29
SPTLC2-202ENST00000554365 ATP1B4Q9UN42 357 aaPredicted RBP23.06■■□□□ 1.28
SPTLC2-202ENST00000554365 UBTFP17480 764 aaKnown RBP23.04■■□□□ 1.28
SPTLC2-202ENST00000554365 RIMS1Q86UR5 1692 aaKnown RBP23.03■■□□□ 1.28
SPTLC2-202ENST00000554365 PCF11O94913 1555 aaKnown RBP23.01■■□□□ 1.27
SPTLC2-202ENST00000554365 YEATS2Q9ULM3 1422 aa23.01■■□□□ 1.27
SPTLC2-202ENST00000554365 PLPPR3Q6T4P5 718 aa23.01■■□□□ 1.27
SPTLC2-202ENST00000554365 ZMYM4Q5VZL5 1548 aa23.01■■□□□ 1.27
SPTLC2-202ENST00000554365 ZFYVE16Q7Z3T8 1539 aa23.01■■□□□ 1.27
SPTLC2-202ENST00000554365 POGZQ7Z3K3 1410 aa22.99■■□□□ 1.27
SPTLC2-202ENST00000554365 LMTK3Q96Q04 1460 aa22.99■■□□□ 1.27
SPTLC2-202ENST00000554365 FBXO41Q8TF61 875 aa22.98■■□□□ 1.27
SPTLC2-202ENST00000554365 PLCH2O75038 1416 aa22.98■■□□□ 1.27
SPTLC2-202ENST00000554365 SCAPERQ9BY12 1400 aa22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms