RNA–Protein interactions for RNA: ENST00000554131.5

PSEN1-210, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 591 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-210ENST00000554131 SHROOM2Q13796 1616 aa30.4■■■□□ 2.46
PSEN1-210ENST00000554131 GOLGA3Q08378 1498 aa30.38■■■□□ 2.45
PSEN1-210ENST00000554131 DNAJC5Q9H3Z4 198 aa30.36■■■□□ 2.45
PSEN1-210ENST00000554131 IQGAP2Q13576 1575 aa30.35■■■□□ 2.45
PSEN1-210ENST00000554131 JPH4Q96JJ6 628 aa30.25■■■□□ 2.43
PSEN1-210ENST00000554131 ERCC6L2Q5T890 1561 aa30.24■■■□□ 2.43
PSEN1-210ENST00000554131 ARHGEF11O15085 1522 aa30.24■■■□□ 2.43
PSEN1-210ENST00000554131 UGGT2Q9NYU1 1516 aa30.23■■■□□ 2.43
PSEN1-210ENST00000554131 EHMT2Q96KQ7 1210 aa30.23■■■□□ 2.43
PSEN1-210ENST00000554131 RIMBP3CA6NJZ7 1639 aa30.21■■■□□ 2.43
PSEN1-210ENST00000554131 RIMBP3BA6NNM3 1639 aa30.21■■■□□ 2.43
PSEN1-210ENST00000554131 RIMBP3Q9UFD9 1639 aa30.21■■■□□ 2.43
PSEN1-210ENST00000554131 PRG4Q92954 1404 aaPredicted RBP30.18■■■□□ 2.42
PSEN1-210ENST00000554131 UBTFP17480 764 aaKnown RBP30.15■■■□□ 2.42
PSEN1-210ENST00000554131 DISP1Q96F81 1524 aa30.15■■■□□ 2.42
PSEN1-210ENST00000554131 TNIKQ9UKE5 1360 aa30.1■■■□□ 2.41
PSEN1-210ENST00000554131 LOC105371045A0A1W2PR82 267 aa30.09■■■□□ 2.41
PSEN1-210ENST00000554131 KIAA0556O60303 1618 aa30.08■■■□□ 2.41
PSEN1-210ENST00000554131 SAMD9Q5K651 1589 aa30.08■■■□□ 2.41
PSEN1-210ENST00000554131 ARAP1Q96P48 1450 aa30.06■■■□□ 2.4
PSEN1-210ENST00000554131 CARMIL2Q6F5E8 1435 aa30.02■■■□□ 2.4
PSEN1-210ENST00000554131 EFCAB5A4FU69 1503 aa29.97■■■□□ 2.39
PSEN1-210ENST00000554131 ARHGAP35Q9NRY4 1499 aa29.93■■■□□ 2.38
PSEN1-210ENST00000554131 RANGAP1P46060 587 aaPredicted RBP29.9■■■□□ 2.38
PSEN1-210ENST00000554131 PTPRGP23470 1445 aa29.85■■■□□ 2.37
PSEN1-210ENST00000554131 FHOD3Q2V2M9 1422 aa29.85■■■□□ 2.37
PSEN1-210ENST00000554131 P3H3Q8IVL6 736 aa29.84■■■□□ 2.37
PSEN1-210ENST00000554131 CLIP1P30622 1438 aa29.84■■■□□ 2.37
PSEN1-210ENST00000554131 CEP162Q5TB80 1403 aa29.84■■■□□ 2.37
PSEN1-210ENST00000554131 CYB5RLQ6IPT4 315 aa29.82■■■□□ 2.36
PSEN1-210ENST00000554131 ABCA8O94911 1581 aa29.75■■■□□ 2.35
PSEN1-210ENST00000554131 ADCY10Q96PN6 1610 aa29.74■■■□□ 2.35
PSEN1-210ENST00000554131 TTBK1Q5TCY1 1321 aaPredicted RBP29.72■■■□□ 2.35
PSEN1-210ENST00000554131 PLB1Q6P1J6 1458 aa29.72■■■□□ 2.35
PSEN1-210ENST00000554131 UACAQ9BZF9 1416 aa29.71■■■□□ 2.35
PSEN1-210ENST00000554131 UHRF1BP1LA0JNW5 1464 aa29.69■■■□□ 2.34
PSEN1-210ENST00000554131 ABCC2Q92887 1545 aa29.68■■■□□ 2.34
PSEN1-210ENST00000554131 RAPGEF6Q8TEU7 1601 aa29.65■■■□□ 2.34
PSEN1-210ENST00000554131 FMN1Q68DA7 1419 aa29.63■■■□□ 2.33
PSEN1-210ENST00000554131 KDM5BQ9UGL1 1544 aa29.55■■■□□ 2.32
PSEN1-210ENST00000554131 NUP153P49790 1475 aaKnown RBP29.55■■■□□ 2.32
PSEN1-210ENST00000554131 PCF11O94913 1555 aaKnown RBP29.55■■■□□ 2.32
PSEN1-210ENST00000554131 ZCCHC11Q5TAX3 1644 aaKnown RBP29.51■■■□□ 2.31
PSEN1-210ENST00000554131 CASKIN1Q8WXD9 1431 aa29.51■■■□□ 2.31
PSEN1-210ENST00000554131 LRRIQ1Q96JM4 1722 aa29.49■■■□□ 2.31
PSEN1-210ENST00000554131 HECW1Q76N89 1606 aa29.49■■■□□ 2.31
PSEN1-210ENST00000554131 ATP10BO94823 1461 aa29.47■■■□□ 2.31
PSEN1-210ENST00000554131 FYCO1Q9BQS8 1478 aa29.46■■■□□ 2.31
PSEN1-210ENST00000554131 VPS8Q8N3P4 1428 aa29.45■■■□□ 2.31
PSEN1-210ENST00000554131 MAPKBP1O60336 1514 aa29.43■■■□□ 2.3
PSEN1-210ENST00000554131 EPRSP07814 1512 aaKnown RBP29.4■■■□□ 2.3
PSEN1-210ENST00000554131 CDK13Q14004 1512 aaKnown RBP29.39■■■□□ 2.3
PSEN1-210ENST00000554131 NPM1P06748 294 aaKnown RBP eCLIP29.36■■■□□ 2.29
PSEN1-210ENST00000554131 ARID3CA6NKF2 412 aa29.35■■■□□ 2.29
PSEN1-210ENST00000554131 ASXL2Q76L83 1435 aa29.33■■■□□ 2.29
PSEN1-210ENST00000554131 CCDC18Q5T9S5 1454 aa29.31■■■□□ 2.28
PSEN1-210ENST00000554131 ATP1B4Q9UN42 357 aaPredicted RBP29.29■■■□□ 2.28
PSEN1-210ENST00000554131 WDR7Q9Y4E6 1490 aa29.27■■■□□ 2.28
PSEN1-210ENST00000554131 CFAP43Q8NDM7 1665 aa29.24■■■□□ 2.27
PSEN1-210ENST00000554131 DIP2BQ9P265 1576 aa29.22■■■□□ 2.27
PSEN1-210ENST00000554131 MAGI3Q5TCQ9 1506 aa29.22■■■□□ 2.27
PSEN1-210ENST00000554131 ABCC10Q5T3U5 1492 aa29.21■■■□□ 2.27
PSEN1-210ENST00000554131 KIF13AQ9H1H9 1805 aa29.2■■■□□ 2.27
PSEN1-210ENST00000554131 TIAM1Q13009 1591 aa29.19■■■□□ 2.26
PSEN1-210ENST00000554131 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.18■■■□□ 2.26
PSEN1-210ENST00000554131 HNRNPUL2Q1KMD3 747 aaKnown RBP29.18■■■□□ 2.26
PSEN1-210ENST00000554131 MAP3K1Q13233 1512 aa29.18■■■□□ 2.26
PSEN1-210ENST00000554131 GLI2P10070 1586 aa29.15■■■□□ 2.26
PSEN1-210ENST00000554131 TROQ12816 1431 aaPredicted RBP29.12■■■□□ 2.25
PSEN1-210ENST00000554131 PLEKHD1A6NEE1 506 aa29.12■■■□□ 2.25
PSEN1-210ENST00000554131 KIF14Q15058 1648 aa29.09■■■□□ 2.25
PSEN1-210ENST00000554131 CDK11AQ9UQ88 783 aaPredicted RBP29.08■■■□□ 2.25
PSEN1-210ENST00000554131 ABCA9Q8IUA7 1624 aa29.07■■■□□ 2.24
PSEN1-210ENST00000554131 MAP3K4Q9Y6R4 1608 aa29.05■■■□□ 2.24
PSEN1-210ENST00000554131 EHBP1L1Q8N3D4 1523 aa29.04■■■□□ 2.24
PSEN1-210ENST00000554131 FAM69CQ0P6D2 419 aa29.04■■■□□ 2.24
PSEN1-210ENST00000554131 KCNH8Q96L42 1107 aa29.04■■■□□ 2.24
PSEN1-210ENST00000554131 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.04■■■□□ 2.24
PSEN1-210ENST00000554131 LRRC9Q6ZRR7 1453 aa29.04■■■□□ 2.24
PSEN1-210ENST00000554131 TTC37Q6PGP7 1564 aa29.01■■■□□ 2.24
PSEN1-210ENST00000554131 KANK4Q5T7N3 995 aaPredicted RBP29■■■□□ 2.23
PSEN1-210ENST00000554131 MTUS2Q5JR59 1369 aa29■■■□□ 2.23
PSEN1-210ENST00000554131 TRHP20396 242 aaPredicted RBP28.98■■■□□ 2.23
PSEN1-210ENST00000554131 PPRC1Q5VV67 1664 aaKnown RBP28.98■■■□□ 2.23
PSEN1-210ENST00000554131 SUPT6HQ7KZ85 1726 aaKnown RBP28.91■■■□□ 2.22
PSEN1-210ENST00000554131 APLP2Q06481 763 aa28.91■■■□□ 2.22
PSEN1-210ENST00000554131 CD109Q6YHK3 1445 aa28.91■■■□□ 2.22
PSEN1-210ENST00000554131 TSPOAP1O95153 1857 aa28.89■■■□□ 2.22
PSEN1-210ENST00000554131 NCOA2Q15596 1464 aa28.87■■■□□ 2.21
PSEN1-210ENST00000554131 CDC42BPAQ5VT25 1732 aa28.87■■■□□ 2.21
PSEN1-210ENST00000554131 MYO5CQ9NQX4 1742 aa28.87■■■□□ 2.21
PSEN1-210ENST00000554131 PREX2Q70Z35 1606 aa28.84■■■□□ 2.21
PSEN1-210ENST00000554131 ARAP3Q8WWN8 1544 aa28.84■■■□□ 2.21
PSEN1-210ENST00000554131 CDC42BPBQ9Y5S2 1711 aa28.83■■■□□ 2.21
PSEN1-210ENST00000554131 PLCH2O75038 1416 aa28.83■■■□□ 2.21
PSEN1-210ENST00000554131 GPATCH8Q9UKJ3 1502 aaKnown RBP28.82■■■□□ 2.2
PSEN1-210ENST00000554131 TEX14Q8IWB6 1497 aa28.77■■■□□ 2.2
PSEN1-210ENST00000554131 ITSN2Q9NZM3 1697 aa28.75■■■□□ 2.19
PSEN1-210ENST00000554131 CCNB3Q8WWL7 1395 aa28.75■■■□□ 2.19
PSEN1-210ENST00000554131 FANCAO15360 1455 aa28.72■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms