RNA–Protein interactions for RNA: ENST00000554131.5

PSEN1-210, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 591 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-210ENST00000554131 NISCHQ9Y2I1 1504 aa44.21■■■■■ 4.67
PSEN1-210ENST00000554131 CCDC180Q9P1Z9 1646 aa39.11■■■■□ 3.85
PSEN1-210ENST00000554131 ABCC9O60706 1549 aa37.71■■■■□ 3.63
PSEN1-210ENST00000554131 ZCCHC6Q5VYS8 1495 aaKnown RBP36.96■■■■□ 3.51
PSEN1-210ENST00000554131 DCAF1Q9Y4B6 1507 aa36.63■■■■□ 3.45
PSEN1-210ENST00000554131 NACADO15069 1562 aa36.61■■■■□ 3.45
PSEN1-210ENST00000554131 MYO15BQ96JP2 1530 aa36.59■■■■□ 3.45
PSEN1-210ENST00000554131 DCAF8L2P0C7V8 631 aa36.52■■■■□ 3.44
PSEN1-210ENST00000554131 RB1CC1Q8TDY2 1594 aa36.51■■■■□ 3.44
PSEN1-210ENST00000554131 UNC13AQ9UPW8 1703 aa35.81■■■■□ 3.32
PSEN1-210ENST00000554131 SCRIBQ14160 1630 aa35.68■■■■□ 3.3
PSEN1-210ENST00000554131 BICRAQ9NZM4 1560 aa35.5■■■■□ 3.27
PSEN1-210ENST00000554131 PABPN1Q86U42 306 aaKnown RBP eCLIP35.29■■■■□ 3.24
PSEN1-210ENST00000554131 SHROOM4Q9ULL8 1493 aa35.12■■■■□ 3.21
PSEN1-210ENST00000554131 EIF4G1Q04637 1599 aaKnown RBP34.45■■■■□ 3.11
PSEN1-210ENST00000554131 CECR2Q9BXF3 1484 aa34.4■■■■□ 3.1
PSEN1-210ENST00000554131 DNAJC5BQ9UF47 199 aa34.22■■■■□ 3.07
PSEN1-210ENST00000554131 SMARCA4P51532 1647 aa34.22■■■■□ 3.07
PSEN1-210ENST00000554131 BAZ1AQ9NRL2 1556 aaPredicted RBP34.2■■■■□ 3.07
PSEN1-210ENST00000554131 CC2D2AQ9P2K1 1620 aa34.19■■■■□ 3.06
PSEN1-210ENST00000554131 MROH2BQ7Z745 1585 aa34.11■■■■□ 3.05
PSEN1-210ENST00000554131 PEG3Q9GZU2 1588 aa33.91■■■■□ 3.02
PSEN1-210ENST00000554131 ATAD2BQ9ULI0 1458 aa33.88■■■■□ 3.01
PSEN1-210ENST00000554131 RSF1Q96T23 1441 aaPredicted RBP33.87■■■■□ 3.01
PSEN1-210ENST00000554131 SMARCA2P51531 1590 aa33.83■■■■□ 3.01
PSEN1-210ENST00000554131 NCAPD3P42695 1498 aa33.79■■■■□ 3
PSEN1-210ENST00000554131 WIZO95785 1651 aa33.76■■■□□ 2.99
PSEN1-210ENST00000554131 HMGXB3Q12766 1538 aa33.69■■■□□ 2.98
PSEN1-210ENST00000554131 BAZ1BQ9UIG0 1483 aaKnown RBP33.58■■■□□ 2.97
PSEN1-210ENST00000554131 TOP2AP11388 1531 aaKnown RBP33.42■■■□□ 2.94
PSEN1-210ENST00000554131 SUPT5HO00267 1087 aaKnown RBP33.23■■■□□ 2.91
PSEN1-210ENST00000554131 CCDC88BA6NC98 1476 aa33.01■■■□□ 2.88
PSEN1-210ENST00000554131 NESP48681 1621 aa32.84■■■□□ 2.85
PSEN1-210ENST00000554131 LAMC3Q9Y6N6 1575 aa32.8■■■□□ 2.84
PSEN1-210ENST00000554131 CADPSQ9ULU8 1353 aa32.79■■■□□ 2.84
PSEN1-210ENST00000554131 CFTRP13569 1480 aa32.74■■■□□ 2.83
PSEN1-210ENST00000554131 PRDM2Q13029 1718 aa32.58■■■□□ 2.81
PSEN1-210ENST00000554131 PDS5BQ9NTI5 1447 aa32.5■■■□□ 2.79
PSEN1-210ENST00000554131 KIF21AQ7Z4S6 1674 aa32.49■■■□□ 2.79
PSEN1-210ENST00000554131 FANCD2Q9BXW9 1451 aa32.42■■■□□ 2.78
PSEN1-210ENST00000554131 ERCC6Q03468 1493 aa32.4■■■□□ 2.78
PSEN1-210ENST00000554131 CEP164Q9UPV0 1460 aa32.31■■■□□ 2.76
PSEN1-210ENST00000554131 THOC2Q8NI27 1593 aaKnown RBP32.28■■■□□ 2.76
PSEN1-210ENST00000554131 MRC2Q9UBG0 1479 aa32.18■■■□□ 2.74
PSEN1-210ENST00000554131 URB2Q14146 1524 aaKnown RBP32.12■■■□□ 2.73
PSEN1-210ENST00000554131 WDR62O43379 1518 aa32.11■■■□□ 2.73
PSEN1-210ENST00000554131 DNMBPQ6XZF7 1577 aa31.99■■■□□ 2.71
PSEN1-210ENST00000554131 TOPBP1Q92547 1522 aa31.99■■■□□ 2.71
PSEN1-210ENST00000554131 ABCC8Q09428 1581 aa31.96■■■□□ 2.71
PSEN1-210ENST00000554131 CUX1P39880 1505 aa31.95■■■□□ 2.71
PSEN1-210ENST00000554131 CUX2O14529 1486 aa31.95■■■□□ 2.7
PSEN1-210ENST00000554131 WRNQ14191 1432 aaPredicted RBP eCLIP31.86■■■□□ 2.69
PSEN1-210ENST00000554131 SYNJ1O43426 1573 aa31.85■■■□□ 2.69
PSEN1-210ENST00000554131 BIVM-ERCC5R4GMW8 1640 aa31.82■■■□□ 2.69
PSEN1-210ENST00000554131 TOP2BQ02880 1626 aa31.81■■■□□ 2.68
PSEN1-210ENST00000554131 POLA1P09884 1462 aaPredicted RBP31.75■■■□□ 2.67
PSEN1-210ENST00000554131 FGD5Q6ZNL6 1462 aa31.73■■■□□ 2.67
PSEN1-210ENST00000554131 TARBP1Q13395 1621 aaKnown RBP31.65■■■□□ 2.66
PSEN1-210ENST00000554131 IFT140Q96RY7 1462 aa31.63■■■□□ 2.65
PSEN1-210ENST00000554131 RAD54L2Q9Y4B4 1467 aa31.59■■■□□ 2.65
PSEN1-210ENST00000554131 SOGA1O94964 1423 aa31.58■■■□□ 2.65
PSEN1-210ENST00000554131 WDR97A6NE52 1622 aa31.54■■■□□ 2.64
PSEN1-210ENST00000554131 ZNF608Q9ULD9 1512 aaPredicted RBP31.49■■■□□ 2.63
PSEN1-210ENST00000554131 ABCA10Q8WWZ4 1543 aa31.47■■■□□ 2.63
PSEN1-210ENST00000554131 EIF4G3O43432 1585 aaKnown RBP31.4■■■□□ 2.62
PSEN1-210ENST00000554131 CHIC1Q5VXU3 224 aa31.39■■■□□ 2.62
PSEN1-210ENST00000554131 TRIM41Q8WV44 630 aa31.36■■■□□ 2.61
PSEN1-210ENST00000554131 ABCA5Q8WWZ7 1642 aa31.35■■■□□ 2.61
PSEN1-210ENST00000554131 AQRO60306 1485 aaKnown RBP eCLIP31.33■■■□□ 2.61
PSEN1-210ENST00000554131 TDRD9Q8NDG6 1382 aaKnown RBP31.33■■■□□ 2.61
PSEN1-210ENST00000554131 GAPVD1Q14C86 1478 aa31.23■■■□□ 2.59
PSEN1-210ENST00000554131 PBRM1Q86U86 1689 aa31.2■■■□□ 2.59
PSEN1-210ENST00000554131 GRIN2BQ13224 1484 aa31.15■■■□□ 2.58
PSEN1-210ENST00000554131 KIF27Q86VH2 1401 aa31.13■■■□□ 2.57
PSEN1-210ENST00000554131 RUSC2Q8N2Y8 1516 aa31.1■■■□□ 2.57
PSEN1-210ENST00000554131 ERICH3Q5RHP9 1530 aa31.08■■■□□ 2.57
PSEN1-210ENST00000554131 SNAPC4Q5SXM2 1469 aa31.07■■■□□ 2.56
PSEN1-210ENST00000554131 MAGI1Q96QZ7 1491 aaPredicted RBP31.03■■■□□ 2.56
PSEN1-210ENST00000554131 IGF1RP08069 1367 aa31■■■□□ 2.55
PSEN1-210ENST00000554131 ADAMTS12P58397 1594 aa30.98■■■□□ 2.55
PSEN1-210ENST00000554131 SYNJ2O15056 1496 aa30.91■■■□□ 2.54
PSEN1-210ENST00000554131 CHD1O14646 1710 aa30.91■■■□□ 2.54
PSEN1-210ENST00000554131 CUL7Q14999 1698 aa30.9■■■□□ 2.54
PSEN1-210ENST00000554131 FHAD1B1AJZ9 1412 aa30.89■■■□□ 2.53
PSEN1-210ENST00000554131 EEA1Q15075 1411 aa30.87■■■□□ 2.53
PSEN1-210ENST00000554131 CARMIL1Q5VZK9 1371 aa30.79■■■□□ 2.52
PSEN1-210ENST00000554131 GRIN2AQ12879 1464 aa30.78■■■□□ 2.52
PSEN1-210ENST00000554131 CHMP7Q8WUX9 453 aaPredicted RBP30.75■■■□□ 2.51
PSEN1-210ENST00000554131 PRXQ9BXM0 1461 aa30.75■■■□□ 2.51
PSEN1-210ENST00000554131 CSRNP3Q8WYN3 585 aa30.73■■■□□ 2.51
PSEN1-210ENST00000554131 FBLN2P98095 1184 aa30.72■■■□□ 2.51
PSEN1-210ENST00000554131 FAM9AQ8IZU1 332 aaPredicted RBP30.7■■■□□ 2.51
PSEN1-210ENST00000554131 RAPGEF2Q9Y4G8 1499 aa30.67■■■□□ 2.5
PSEN1-210ENST00000554131 CEP170Q5SW79 1584 aa30.66■■■□□ 2.5
PSEN1-210ENST00000554131 NUP160Q12769 1436 aa30.65■■■□□ 2.5
PSEN1-210ENST00000554131 OSCARQ8IYS5 282 aa30.63■■■□□ 2.49
PSEN1-210ENST00000554131 CLASP1Q7Z460 1538 aa30.61■■■□□ 2.49
PSEN1-210ENST00000554131 KIF21BO75037 1637 aa30.59■■■□□ 2.49
PSEN1-210ENST00000554131 KIAA0586Q9BVV6 1533 aa30.44■■■□□ 2.46
PSEN1-210ENST00000554131 CTTNBP2Q8WZ74 1663 aa30.42■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms