RNA–Protein interactions for RNA: ENST00000554116.5

TUBB3-204, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 542 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-204ENST00000554116 RUSC2Q8N2Y8 1516 aa20.71■□□□□ 0.91
TUBB3-204ENST00000554116 IGF1RP08069 1367 aa20.62■□□□□ 0.89
TUBB3-204ENST00000554116 ADCY10Q96PN6 1610 aa20.6■□□□□ 0.89
TUBB3-204ENST00000554116 ABCC10Q5T3U5 1492 aa20.59■□□□□ 0.89
TUBB3-204ENST00000554116 MAPKBP1O60336 1514 aa20.57■□□□□ 0.88
TUBB3-204ENST00000554116 KIAA0586Q9BVV6 1533 aa20.56■□□□□ 0.88
TUBB3-204ENST00000554116 DIP2BQ9P265 1576 aa20.55■□□□□ 0.88
TUBB3-204ENST00000554116 FAM69CQ0P6D2 419 aa20.54■□□□□ 0.88
TUBB3-204ENST00000554116 CUL7Q14999 1698 aa20.5■□□□□ 0.87
TUBB3-204ENST00000554116 KIF27Q86VH2 1401 aa20.49■□□□□ 0.87
TUBB3-204ENST00000554116 NPM1P06748 294 aaKnown RBP eCLIP20.46■□□□□ 0.87
TUBB3-204ENST00000554116 CARMIL1Q5VZK9 1371 aa20.42■□□□□ 0.86
TUBB3-204ENST00000554116 TSPOAP1O95153 1857 aa20.41■□□□□ 0.86
TUBB3-204ENST00000554116 PTPRGP23470 1445 aa20.39■□□□□ 0.85
TUBB3-204ENST00000554116 KDM4FA0A1W2PPD8 638 aa20.37■□□□□ 0.85
TUBB3-204ENST00000554116 KDM6BO15054 1643 aa20.37■□□□□ 0.85
TUBB3-204ENST00000554116 TNIKQ9UKE5 1360 aa20.34■□□□□ 0.85
TUBB3-204ENST00000554116 ABCC2Q92887 1545 aa20.32■□□□□ 0.84
TUBB3-204ENST00000554116 PPRC1Q5VV67 1664 aaKnown RBP20.32■□□□□ 0.84
TUBB3-204ENST00000554116 IQGAP2Q13576 1575 aa20.32■□□□□ 0.84
TUBB3-204ENST00000554116 DISP1Q96F81 1524 aa20.32■□□□□ 0.84
TUBB3-204ENST00000554116 TTBK1Q5TCY1 1321 aaPredicted RBP20.3■□□□□ 0.84
TUBB3-204ENST00000554116 CARMIL2Q6F5E8 1435 aa20.28■□□□□ 0.84
TUBB3-204ENST00000554116 ASXL2Q76L83 1435 aa20.28■□□□□ 0.84
TUBB3-204ENST00000554116 UHRF1BP1LA0JNW5 1464 aa20.28■□□□□ 0.84
TUBB3-204ENST00000554116 GLI2P10070 1586 aa20.27■□□□□ 0.84
TUBB3-204ENST00000554116 PLB1Q6P1J6 1458 aa20.24■□□□□ 0.83
TUBB3-204ENST00000554116 UACAQ9BZF9 1416 aa20.23■□□□□ 0.83
TUBB3-204ENST00000554116 COL17A1Q9UMD9 1497 aaPredicted RBP20.23■□□□□ 0.83
TUBB3-204ENST00000554116 UGGT2Q9NYU1 1516 aa20.22■□□□□ 0.83
TUBB3-204ENST00000554116 KDM5BQ9UGL1 1544 aa20.22■□□□□ 0.83
TUBB3-204ENST00000554116 RAPGEF2Q9Y4G8 1499 aa20.19■□□□□ 0.82
TUBB3-204ENST00000554116 EPRSP07814 1512 aaKnown RBP20.18■□□□□ 0.82
TUBB3-204ENST00000554116 MAP3K4Q9Y6R4 1608 aa20.16■□□□□ 0.82
TUBB3-204ENST00000554116 KIAA0556O60303 1618 aa20.16■□□□□ 0.82
TUBB3-204ENST00000554116 ZCCHC11Q5TAX3 1644 aaKnown RBP20.16■□□□□ 0.82
TUBB3-204ENST00000554116 ILDR1Q86SU0 546 aaPredicted RBP20.12■□□□□ 0.81
TUBB3-204ENST00000554116 ADGRL1O94910 1474 aa20.08■□□□□ 0.81
TUBB3-204ENST00000554116 CTTNBP2Q8WZ74 1663 aa20.05■□□□□ 0.8
TUBB3-204ENST00000554116 WDR7Q9Y4E6 1490 aa20.03■□□□□ 0.8
TUBB3-204ENST00000554116 ABCA8O94911 1581 aa20.03■□□□□ 0.8
TUBB3-204ENST00000554116 TEX14Q8IWB6 1497 aa20.01■□□□□ 0.79
TUBB3-204ENST00000554116 PRXQ9BXM0 1461 aa19.99■□□□□ 0.79
TUBB3-204ENST00000554116 MAGI3Q5TCQ9 1506 aa19.95■□□□□ 0.78
TUBB3-204ENST00000554116 CFAP43Q8NDM7 1665 aa19.94■□□□□ 0.78
TUBB3-204ENST00000554116 HECW2Q9P2P5 1572 aa19.94■□□□□ 0.78
TUBB3-204ENST00000554116 GOLGA3Q08378 1498 aa19.93■□□□□ 0.78
TUBB3-204ENST00000554116 CD109Q6YHK3 1445 aa19.93■□□□□ 0.78
TUBB3-204ENST00000554116 KCNH8Q96L42 1107 aa19.91■□□□□ 0.78
TUBB3-204ENST00000554116 ATP10BO94823 1461 aa19.86■□□□□ 0.77
TUBB3-204ENST00000554116 P3H3Q8IVL6 736 aa19.82■□□□□ 0.76
TUBB3-204ENST00000554116 ARAP3Q8WWN8 1544 aa19.81■□□□□ 0.76
TUBB3-204ENST00000554116 ARID3CA6NKF2 412 aa19.81■□□□□ 0.76
TUBB3-204ENST00000554116 KIF21BO75037 1637 aa19.8■□□□□ 0.76
TUBB3-204ENST00000554116 SAMD9Q5K651 1589 aa19.79■□□□□ 0.76
TUBB3-204ENST00000554116 ABCA9Q8IUA7 1624 aa19.78■□□□□ 0.76
TUBB3-204ENST00000554116 CSRNP3Q8WYN3 585 aa19.73■□□□□ 0.75
TUBB3-204ENST00000554116 RAPGEF6Q8TEU7 1601 aa19.72■□□□□ 0.75
TUBB3-204ENST00000554116 ADAMTSL3P82987 1691 aa19.69■□□□□ 0.74
TUBB3-204ENST00000554116 NUP153P49790 1475 aaKnown RBP19.69■□□□□ 0.74
TUBB3-204ENST00000554116 RAPGEF3O95398 923 aa19.69■□□□□ 0.74
TUBB3-204ENST00000554116 FRMPD1Q5SYB0 1578 aa19.69■□□□□ 0.74
TUBB3-204ENST00000554116 PHLDB1Q86UU1 1377 aa19.67■□□□□ 0.74
TUBB3-204ENST00000554116 NEO1Q92859 1461 aa19.66■□□□□ 0.74
TUBB3-204ENST00000554116 FBXO41Q8TF61 875 aa19.65■□□□□ 0.74
TUBB3-204ENST00000554116 PTPRMP28827 1452 aa19.63■□□□□ 0.73
TUBB3-204ENST00000554116 FHOD3Q2V2M9 1422 aa19.63■□□□□ 0.73
TUBB3-204ENST00000554116 BCORL1Q5H9F3 1711 aa19.6■□□□□ 0.73
TUBB3-204ENST00000554116 RICTORQ6R327 1708 aa19.58■□□□□ 0.72
TUBB3-204ENST00000554116 RANGAP1P46060 587 aaPredicted RBP19.57■□□□□ 0.72
TUBB3-204ENST00000554116 FAM9AQ8IZU1 332 aaPredicted RBP19.57■□□□□ 0.72
TUBB3-204ENST00000554116 MADDQ8WXG6 1647 aa19.57■□□□□ 0.72
TUBB3-204ENST00000554116 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.56■□□□□ 0.72
TUBB3-204ENST00000554116 HNRNPUL2Q1KMD3 747 aaKnown RBP19.56■□□□□ 0.72
TUBB3-204ENST00000554116 SIGLEC1Q9BZZ2 1709 aa19.55■□□□□ 0.72
TUBB3-204ENST00000554116 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.55■□□□□ 0.72
TUBB3-204ENST00000554116 EEA1Q15075 1411 aa19.54■□□□□ 0.72
TUBB3-204ENST00000554116 AKNAQ7Z591 1439 aa19.52■□□□□ 0.72
TUBB3-204ENST00000554116 ARHGEF40Q8TER5 1519 aa19.52■□□□□ 0.72
TUBB3-204ENST00000554116 TTC37Q6PGP7 1564 aa19.52■□□□□ 0.71
TUBB3-204ENST00000554116 DENND4BO75064 1496 aaPredicted RBP19.5■□□□□ 0.71
TUBB3-204ENST00000554116 PLEKHD1A6NEE1 506 aa19.5■□□□□ 0.71
TUBB3-204ENST00000554116 FANCAO15360 1455 aa19.49■□□□□ 0.71
TUBB3-204ENST00000554116 LMTK3Q96Q04 1460 aa19.49■□□□□ 0.71
TUBB3-204ENST00000554116 PCF11O94913 1555 aaKnown RBP19.48■□□□□ 0.71
TUBB3-204ENST00000554116 EFCAB5A4FU69 1503 aa19.47■□□□□ 0.71
TUBB3-204ENST00000554116 CDK13Q14004 1512 aaKnown RBP19.47■□□□□ 0.71
TUBB3-204ENST00000554116 RIMS1Q86UR5 1692 aaKnown RBP19.46■□□□□ 0.71
TUBB3-204ENST00000554116 ZMYM4Q5VZL5 1548 aa19.46■□□□□ 0.71
TUBB3-204ENST00000554116 YEATS2Q9ULM3 1422 aa19.46■□□□□ 0.71
TUBB3-204ENST00000554116 ARID4BQ4LE39 1312 aaPredicted RBP19.46■□□□□ 0.71
TUBB3-204ENST00000554116 CFAP74Q9C0B2 1584 aa19.44■□□□□ 0.7
TUBB3-204ENST00000554116 HECW1Q76N89 1606 aa19.41■□□□□ 0.7
TUBB3-204ENST00000554116 PLCH2O75038 1416 aa19.4■□□□□ 0.7
TUBB3-204ENST00000554116 ZFYVE16Q7Z3T8 1539 aa19.39■□□□□ 0.69
TUBB3-204ENST00000554116 MAGI2Q86UL8 1455 aa19.36■□□□□ 0.69
TUBB3-204ENST00000554116 ARHGAP35Q9NRY4 1499 aa19.36■□□□□ 0.69
TUBB3-204ENST00000554116 POGZQ7Z3K3 1410 aa19.36■□□□□ 0.69
TUBB3-204ENST00000554116 SCAPERQ9BY12 1400 aa19.36■□□□□ 0.69
TUBB3-204ENST00000554116 HSPA2P54652 639 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms