RNA–Protein interactions for RNA: ENST00000553998.5

ABCD4-220, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 478 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-220ENST00000553998 KIF13AQ9H1H9 1805 aa13.87□□□□□ -0.19
ABCD4-220ENST00000553998 BIVM-ERCC5R4GMW8 1640 aa13.86□□□□□ -0.19
ABCD4-220ENST00000553998 MAPKBP1O60336 1514 aa13.85□□□□□ -0.19
ABCD4-220ENST00000553998 KDM4FA0A1W2PPD8 638 aa13.85□□□□□ -0.19
ABCD4-220ENST00000553998 SUPT5HO00267 1087 aaKnown RBP13.8□□□□□ -0.2
ABCD4-220ENST00000553998 DIP2BQ9P265 1576 aa13.79□□□□□ -0.2
ABCD4-220ENST00000553998 RUSC2Q8N2Y8 1516 aa13.78□□□□□ -0.2
ABCD4-220ENST00000553998 KIAA0586Q9BVV6 1533 aa13.77□□□□□ -0.21
ABCD4-220ENST00000553998 ADCY10Q96PN6 1610 aa13.75□□□□□ -0.21
ABCD4-220ENST00000553998 IGF1RP08069 1367 aa13.75□□□□□ -0.21
ABCD4-220ENST00000553998 KDM6BO15054 1643 aa13.72□□□□□ -0.21
ABCD4-220ENST00000553998 ILDR1Q86SU0 546 aaPredicted RBP13.7□□□□□ -0.22
ABCD4-220ENST00000553998 PTPRGP23470 1445 aa13.7□□□□□ -0.22
ABCD4-220ENST00000553998 TNIKQ9UKE5 1360 aa13.66□□□□□ -0.22
ABCD4-220ENST00000553998 KIF27Q86VH2 1401 aa13.65□□□□□ -0.22
ABCD4-220ENST00000553998 ABCC2Q92887 1545 aa13.65□□□□□ -0.22
ABCD4-220ENST00000553998 PLB1Q6P1J6 1458 aa13.65□□□□□ -0.22
ABCD4-220ENST00000553998 GLI2P10070 1586 aa13.64□□□□□ -0.23
ABCD4-220ENST00000553998 CARMIL2Q6F5E8 1435 aa13.63□□□□□ -0.23
ABCD4-220ENST00000553998 ASXL2Q76L83 1435 aa13.63□□□□□ -0.23
ABCD4-220ENST00000553998 UHRF1BP1LA0JNW5 1464 aa13.62□□□□□ -0.23
ABCD4-220ENST00000553998 CARMIL1Q5VZK9 1371 aa13.61□□□□□ -0.23
ABCD4-220ENST00000553998 CUL7Q14999 1698 aa13.6□□□□□ -0.23
ABCD4-220ENST00000553998 COL17A1Q9UMD9 1497 aaPredicted RBP13.6□□□□□ -0.23
ABCD4-220ENST00000553998 UACAQ9BZF9 1416 aa13.58□□□□□ -0.24
ABCD4-220ENST00000553998 ADGRL1O94910 1474 aa13.58□□□□□ -0.24
ABCD4-220ENST00000553998 TSPOAP1O95153 1857 aa13.56□□□□□ -0.24
ABCD4-220ENST00000553998 PPRC1Q5VV67 1664 aaKnown RBP13.56□□□□□ -0.24
ABCD4-220ENST00000553998 EPRSP07814 1512 aaKnown RBP13.55□□□□□ -0.24
ABCD4-220ENST00000553998 KDM5BQ9UGL1 1544 aa13.55□□□□□ -0.24
ABCD4-220ENST00000553998 TTBK1Q5TCY1 1321 aaPredicted RBP13.54□□□□□ -0.24
ABCD4-220ENST00000553998 DISP1Q96F81 1524 aa13.54□□□□□ -0.24
ABCD4-220ENST00000553998 TEX14Q8IWB6 1497 aa13.52□□□□□ -0.25
ABCD4-220ENST00000553998 IQGAP2Q13576 1575 aa13.5□□□□□ -0.25
ABCD4-220ENST00000553998 MAP3K4Q9Y6R4 1608 aa13.49□□□□□ -0.25
ABCD4-220ENST00000553998 UGGT2Q9NYU1 1516 aa13.48□□□□□ -0.25
ABCD4-220ENST00000553998 HECW2Q9P2P5 1572 aa13.45□□□□□ -0.26
ABCD4-220ENST00000553998 WDR7Q9Y4E6 1490 aa13.43□□□□□ -0.26
ABCD4-220ENST00000553998 RAPGEF2Q9Y4G8 1499 aa13.43□□□□□ -0.26
ABCD4-220ENST00000553998 MAGI3Q5TCQ9 1506 aa13.43□□□□□ -0.26
ABCD4-220ENST00000553998 CD109Q6YHK3 1445 aa13.41□□□□□ -0.26
ABCD4-220ENST00000553998 ZCCHC11Q5TAX3 1644 aaKnown RBP13.41□□□□□ -0.26
ABCD4-220ENST00000553998 KIAA0556O60303 1618 aa13.39□□□□□ -0.27
ABCD4-220ENST00000553998 FBXO41Q8TF61 875 aa13.37□□□□□ -0.27
ABCD4-220ENST00000553998 KCNH8Q96L42 1107 aa13.35□□□□□ -0.27
ABCD4-220ENST00000553998 ARAP3Q8WWN8 1544 aa13.34□□□□□ -0.27
ABCD4-220ENST00000553998 ABCA8O94911 1581 aa13.33□□□□□ -0.28
ABCD4-220ENST00000553998 GOLGA3Q08378 1498 aa13.33□□□□□ -0.28
ABCD4-220ENST00000553998 PHLDB1Q86UU1 1377 aa13.32□□□□□ -0.28
ABCD4-220ENST00000553998 CFAP43Q8NDM7 1665 aa13.31□□□□□ -0.28
ABCD4-220ENST00000553998 PTPRMP28827 1452 aa13.26□□□□□ -0.29
ABCD4-220ENST00000553998 ATP10BO94823 1461 aa13.25□□□□□ -0.29
ABCD4-220ENST00000553998 PRXQ9BXM0 1461 aa13.25□□□□□ -0.29
ABCD4-220ENST00000553998 RAPGEF3O95398 923 aa13.23□□□□□ -0.29
ABCD4-220ENST00000553998 FAM9AQ8IZU1 332 aaPredicted RBP13.23□□□□□ -0.29
ABCD4-220ENST00000553998 KIF21BO75037 1637 aa13.23□□□□□ -0.29
ABCD4-220ENST00000553998 ADAMTSL3P82987 1691 aa13.22□□□□□ -0.29
ABCD4-220ENST00000553998 NEO1Q92859 1461 aa13.22□□□□□ -0.29
ABCD4-220ENST00000553998 ABCA9Q8IUA7 1624 aa13.2□□□□□ -0.3
ABCD4-220ENST00000553998 CTTNBP2Q8WZ74 1663 aa13.18□□□□□ -0.3
ABCD4-220ENST00000553998 LMTK3Q96Q04 1460 aa13.16□□□□□ -0.3
ABCD4-220ENST00000553998 ARID3CA6NKF2 412 aa13.16□□□□□ -0.3
ABCD4-220ENST00000553998 PCF11O94913 1555 aaKnown RBP13.15□□□□□ -0.3
ABCD4-220ENST00000553998 P3H3Q8IVL6 736 aa13.15□□□□□ -0.3
ABCD4-220ENST00000553998 ARID4BQ4LE39 1312 aaPredicted RBP13.13□□□□□ -0.31
ABCD4-220ENST00000553998 BCORL1Q5H9F3 1711 aa13.13□□□□□ -0.31
ABCD4-220ENST00000553998 FHOD3Q2V2M9 1422 aa13.13□□□□□ -0.31
ABCD4-220ENST00000553998 FRMPD1Q5SYB0 1578 aa13.12□□□□□ -0.31
ABCD4-220ENST00000553998 DENND4BO75064 1496 aaPredicted RBP13.1□□□□□ -0.31
ABCD4-220ENST00000553998 MADDQ8WXG6 1647 aa13.1□□□□□ -0.31
ABCD4-220ENST00000553998 NUP153P49790 1475 aaKnown RBP13.1□□□□□ -0.31
ABCD4-220ENST00000553998 SAMD9Q5K651 1589 aa13.09□□□□□ -0.31
ABCD4-220ENST00000553998 AKNAQ7Z591 1439 aa13.09□□□□□ -0.31
ABCD4-220ENST00000553998 PLEKHD1A6NEE1 506 aa13.08□□□□□ -0.32
ABCD4-220ENST00000553998 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.08□□□□□ -0.32
ABCD4-220ENST00000553998 HNRNPUL2Q1KMD3 747 aaKnown RBP13.08□□□□□ -0.32
ABCD4-220ENST00000553998 CERKQ8TCT0 537 aa13.08□□□□□ -0.32
ABCD4-220ENST00000553998 CSRNP3Q8WYN3 585 aa13.08□□□□□ -0.32
ABCD4-220ENST00000553998 POGZQ7Z3K3 1410 aa13.07□□□□□ -0.32
ABCD4-220ENST00000553998 RAPGEF6Q8TEU7 1601 aa13.07□□□□□ -0.32
ABCD4-220ENST00000553998 HSPA2P54652 639 aa13.07□□□□□ -0.32
ABCD4-220ENST00000553998 ARHGEF40Q8TER5 1519 aa13.07□□□□□ -0.32
ABCD4-220ENST00000553998 MAGI2Q86UL8 1455 aa13.05□□□□□ -0.32
ABCD4-220ENST00000553998 FANCAO15360 1455 aa13.04□□□□□ -0.32
ABCD4-220ENST00000553998 ZMYM4Q5VZL5 1548 aa13.03□□□□□ -0.32
ABCD4-220ENST00000553998 YEATS2Q9ULM3 1422 aa13.02□□□□□ -0.33
ABCD4-220ENST00000553998 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.01□□□□□ -0.33
ABCD4-220ENST00000553998 RICTORQ6R327 1708 aa13.01□□□□□ -0.33
ABCD4-220ENST00000553998 RIMS1Q86UR5 1692 aaKnown RBP13□□□□□ -0.33
ABCD4-220ENST00000553998 EFCAB5A4FU69 1503 aa12.99□□□□□ -0.33
ABCD4-220ENST00000553998 ZFYVE16Q7Z3T8 1539 aa12.99□□□□□ -0.33
ABCD4-220ENST00000553998 PLCH2O75038 1416 aa12.98□□□□□ -0.33
ABCD4-220ENST00000553998 CFAP74Q9C0B2 1584 aa12.98□□□□□ -0.33
ABCD4-220ENST00000553998 SCAPERQ9BY12 1400 aa12.97□□□□□ -0.33
ABCD4-220ENST00000553998 DMRT2Q9Y5R5 561 aa12.97□□□□□ -0.33
ABCD4-220ENST00000553998 ATP10AO60312 1499 aa12.97□□□□□ -0.33
ABCD4-220ENST00000553998 TTC37Q6PGP7 1564 aa12.96□□□□□ -0.33
ABCD4-220ENST00000553998 MLECQ14165 292 aa12.96□□□□□ -0.33
ABCD4-220ENST00000553998 ARHGEF12Q9NZN5 1544 aa12.96□□□□□ -0.33
ABCD4-220ENST00000553998 HECW1Q76N89 1606 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms