RNA–Protein interactions for RNA: ENST00000553544.1

SRP54-203, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 491 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-203ENST00000553544 BIVM-ERCC5R4GMW8 1640 aa20.94■□□□□ 0.94
SRP54-203ENST00000553544 ABCC10Q5T3U5 1492 aa20.91■□□□□ 0.94
SRP54-203ENST00000553544 KIF13AQ9H1H9 1805 aa20.9■□□□□ 0.94
SRP54-203ENST00000553544 MAPKBP1O60336 1514 aa20.82■□□□□ 0.92
SRP54-203ENST00000553544 KDM4FA0A1W2PPD8 638 aa20.81■□□□□ 0.92
SRP54-203ENST00000553544 KIAA0586Q9BVV6 1533 aa20.78■□□□□ 0.92
SRP54-203ENST00000553544 IGF1RP08069 1367 aa20.77■□□□□ 0.92
SRP54-203ENST00000553544 RUSC2Q8N2Y8 1516 aa20.77■□□□□ 0.92
SRP54-203ENST00000553544 DIP2BQ9P265 1576 aa20.74■□□□□ 0.91
SRP54-203ENST00000553544 ADCY10Q96PN6 1610 aa20.74■□□□□ 0.91
SRP54-203ENST00000553544 PTPRGP23470 1445 aa20.72■□□□□ 0.91
SRP54-203ENST00000553544 TTBK1Q5TCY1 1321 aaPredicted RBP20.71■□□□□ 0.91
SRP54-203ENST00000553544 KIF27Q86VH2 1401 aa20.7■□□□□ 0.9
SRP54-203ENST00000553544 KDM6BO15054 1643 aa20.69■□□□□ 0.9
SRP54-203ENST00000553544 CARMIL2Q6F5E8 1435 aa20.63■□□□□ 0.89
SRP54-203ENST00000553544 CARMIL1Q5VZK9 1371 aa20.62■□□□□ 0.89
SRP54-203ENST00000553544 TNIKQ9UKE5 1360 aa20.62■□□□□ 0.89
SRP54-203ENST00000553544 TSPOAP1O95153 1857 aa20.62■□□□□ 0.89
SRP54-203ENST00000553544 PLB1Q6P1J6 1458 aa20.58■□□□□ 0.89
SRP54-203ENST00000553544 ILDR1Q86SU0 546 aaPredicted RBP20.58■□□□□ 0.89
SRP54-203ENST00000553544 ABCC2Q92887 1545 aa20.58■□□□□ 0.88
SRP54-203ENST00000553544 CUL7Q14999 1698 aa20.58■□□□□ 0.88
SRP54-203ENST00000553544 ASXL2Q76L83 1435 aa20.57■□□□□ 0.88
SRP54-203ENST00000553544 UACAQ9BZF9 1416 aa20.51■□□□□ 0.87
SRP54-203ENST00000553544 UHRF1BP1LA0JNW5 1464 aa20.5■□□□□ 0.87
SRP54-203ENST00000553544 GLI2P10070 1586 aa20.5■□□□□ 0.87
SRP54-203ENST00000553544 ADGRL1O94910 1474 aa20.44■□□□□ 0.86
SRP54-203ENST00000553544 IQGAP2Q13576 1575 aa20.43■□□□□ 0.86
SRP54-203ENST00000553544 COL17A1Q9UMD9 1497 aaPredicted RBP20.43■□□□□ 0.86
SRP54-203ENST00000553544 EPRSP07814 1512 aaKnown RBP20.42■□□□□ 0.86
SRP54-203ENST00000553544 TEX14Q8IWB6 1497 aa20.4■□□□□ 0.86
SRP54-203ENST00000553544 DISP1Q96F81 1524 aa20.4■□□□□ 0.86
SRP54-203ENST00000553544 KDM5BQ9UGL1 1544 aa20.4■□□□□ 0.86
SRP54-203ENST00000553544 PPRC1Q5VV67 1664 aaKnown RBP20.39■□□□□ 0.86
SRP54-203ENST00000553544 RAPGEF2Q9Y4G8 1499 aa20.34■□□□□ 0.85
SRP54-203ENST00000553544 KCNH8Q96L42 1107 aa20.33■□□□□ 0.85
SRP54-203ENST00000553544 UGGT2Q9NYU1 1516 aa20.32■□□□□ 0.84
SRP54-203ENST00000553544 MAP3K4Q9Y6R4 1608 aa20.31■□□□□ 0.84
SRP54-203ENST00000553544 WDR7Q9Y4E6 1490 aa20.27■□□□□ 0.84
SRP54-203ENST00000553544 ZCCHC11Q5TAX3 1644 aaKnown RBP20.27■□□□□ 0.83
SRP54-203ENST00000553544 CD109Q6YHK3 1445 aa20.27■□□□□ 0.83
SRP54-203ENST00000553544 FAM9AQ8IZU1 332 aaPredicted RBP20.25■□□□□ 0.83
SRP54-203ENST00000553544 HECW2Q9P2P5 1572 aa20.24■□□□□ 0.83
SRP54-203ENST00000553544 KIAA0556O60303 1618 aa20.23■□□□□ 0.83
SRP54-203ENST00000553544 MAGI3Q5TCQ9 1506 aa20.21■□□□□ 0.83
SRP54-203ENST00000553544 GOLGA3Q08378 1498 aa20.19■□□□□ 0.82
SRP54-203ENST00000553544 CFAP43Q8NDM7 1665 aa20.1■□□□□ 0.81
SRP54-203ENST00000553544 ABCA8O94911 1581 aa20.1■□□□□ 0.81
SRP54-203ENST00000553544 FBXO41Q8TF61 875 aa20.1■□□□□ 0.81
SRP54-203ENST00000553544 ARID3CA6NKF2 412 aa20.09■□□□□ 0.81
SRP54-203ENST00000553544 PHLDB1Q86UU1 1377 aa20.08■□□□□ 0.81
SRP54-203ENST00000553544 P3H3Q8IVL6 736 aa20.07■□□□□ 0.8
SRP54-203ENST00000553544 ARAP3Q8WWN8 1544 aa20.07■□□□□ 0.8
SRP54-203ENST00000553544 RAPGEF3O95398 923 aa20.04■□□□□ 0.8
SRP54-203ENST00000553544 ATP10BO94823 1461 aa20.03■□□□□ 0.8
SRP54-203ENST00000553544 PRXQ9BXM0 1461 aa20.01■□□□□ 0.79
SRP54-203ENST00000553544 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.01■□□□□ 0.79
SRP54-203ENST00000553544 HNRNPUL2Q1KMD3 747 aaKnown RBP20.01■□□□□ 0.79
SRP54-203ENST00000553544 CTTNBP2Q8WZ74 1663 aa20■□□□□ 0.79
SRP54-203ENST00000553544 ARID4BQ4LE39 1312 aaPredicted RBP20■□□□□ 0.79
SRP54-203ENST00000553544 KIF21BO75037 1637 aa19.98■□□□□ 0.79
SRP54-203ENST00000553544 PTPRMP28827 1452 aa19.98■□□□□ 0.79
SRP54-203ENST00000553544 NEO1Q92859 1461 aa19.92■□□□□ 0.78
SRP54-203ENST00000553544 CSRNP3Q8WYN3 585 aa19.9■□□□□ 0.78
SRP54-203ENST00000553544 PLEKHD1A6NEE1 506 aa19.89■□□□□ 0.77
SRP54-203ENST00000553544 ADAMTSL3P82987 1691 aa19.89■□□□□ 0.77
SRP54-203ENST00000553544 ABCA9Q8IUA7 1624 aa19.89■□□□□ 0.77
SRP54-203ENST00000553544 RANGAP1P46060 587 aaPredicted RBP19.84■□□□□ 0.77
SRP54-203ENST00000553544 CHIC1Q5VXU3 224 aa19.84■□□□□ 0.77
SRP54-203ENST00000553544 DENND4BO75064 1496 aaPredicted RBP19.8■□□□□ 0.76
SRP54-203ENST00000553544 PLPPR3Q6T4P5 718 aa19.8■□□□□ 0.76
SRP54-203ENST00000553544 RAPGEF6Q8TEU7 1601 aa19.8■□□□□ 0.76
SRP54-203ENST00000553544 BCORL1Q5H9F3 1711 aa19.79■□□□□ 0.76
SRP54-203ENST00000553544 PCF11O94913 1555 aaKnown RBP19.79■□□□□ 0.76
SRP54-203ENST00000553544 AKNAQ7Z591 1439 aa19.79■□□□□ 0.76
SRP54-203ENST00000553544 HSPA2P54652 639 aa19.79■□□□□ 0.76
SRP54-203ENST00000553544 LMTK3Q96Q04 1460 aa19.78■□□□□ 0.76
SRP54-203ENST00000553544 POGZQ7Z3K3 1410 aa19.77■□□□□ 0.76
SRP54-203ENST00000553544 NUP153P49790 1475 aaKnown RBP19.77■□□□□ 0.76
SRP54-203ENST00000553544 SAMD9Q5K651 1589 aa19.76■□□□□ 0.75
SRP54-203ENST00000553544 MADDQ8WXG6 1647 aa19.76■□□□□ 0.75
SRP54-203ENST00000553544 FHOD3Q2V2M9 1422 aa19.75■□□□□ 0.75
SRP54-203ENST00000553544 FRMPD1Q5SYB0 1578 aa19.74■□□□□ 0.75
SRP54-203ENST00000553544 FANCAO15360 1455 aa19.73■□□□□ 0.75
SRP54-203ENST00000553544 MLECQ14165 292 aa19.72■□□□□ 0.75
SRP54-203ENST00000553544 EEA1Q15075 1411 aa19.72■□□□□ 0.75
SRP54-203ENST00000553544 CERKQ8TCT0 537 aa19.72■□□□□ 0.75
SRP54-203ENST00000553544 ARHGEF40Q8TER5 1519 aa19.68■□□□□ 0.74
SRP54-203ENST00000553544 MAGI2Q86UL8 1455 aa19.67■□□□□ 0.74
SRP54-203ENST00000553544 RIMS1Q86UR5 1692 aaKnown RBP19.67■□□□□ 0.74
SRP54-203ENST00000553544 YEATS2Q9ULM3 1422 aa19.65■□□□□ 0.74
SRP54-203ENST00000553544 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.65■□□□□ 0.741e-7■■□□□ 13.5
SRP54-203ENST00000553544 SCAPERQ9BY12 1400 aa19.64■□□□□ 0.73
SRP54-203ENST00000553544 RICTORQ6R327 1708 aa19.64■□□□□ 0.73
SRP54-203ENST00000553544 CFAP74Q9C0B2 1584 aa19.63■□□□□ 0.73
SRP54-203ENST00000553544 ZFYVE16Q7Z3T8 1539 aa19.63■□□□□ 0.73
SRP54-203ENST00000553544 EFCAB2Q5VUJ9 269 aa19.63■□□□□ 0.73
SRP54-203ENST00000553544 DMRT2Q9Y5R5 561 aa19.62■□□□□ 0.73
SRP54-203ENST00000553544 EFCAB5A4FU69 1503 aa19.61■□□□□ 0.73
SRP54-203ENST00000553544 PLCH2O75038 1416 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms