RNA–Protein interactions for RNA: ENST00000553264.5

XRCC3-202, Transcript of X-ray repair cross complementing 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene XRCC3, Length 3,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-202ENST00000553264 TSHZ2Q9NRE2 1034 aa18.61■□□□□ 0.57
XRCC3-202ENST00000553264 LAMC3Q9Y6N6 1575 aa18.58■□□□□ 0.56
XRCC3-202ENST00000553264 ITGAEP38570 1179 aa18.57■□□□□ 0.56
XRCC3-202ENST00000553264 ABCA10Q8WWZ4 1543 aa18.56■□□□□ 0.56
XRCC3-202ENST00000553264 P3H3Q8IVL6 736 aa18.55■□□□□ 0.56
XRCC3-202ENST00000553264 KCNH8Q96L42 1107 aa18.55■□□□□ 0.56
XRCC3-202ENST00000553264 URB2Q14146 1524 aaKnown RBP18.54■□□□□ 0.56
XRCC3-202ENST00000553264 PDS5BQ9NTI5 1447 aa18.53■□□□□ 0.56
XRCC3-202ENST00000553264 RRBP1Q9P2E9 1410 aaKnown RBP18.52■□□□□ 0.56
XRCC3-202ENST00000553264 ATP1B4Q9UN42 357 aaPredicted RBP18.51■□□□□ 0.55
XRCC3-202ENST00000553264 TDRD9Q8NDG6 1382 aaKnown RBP18.5■□□□□ 0.55
XRCC3-202ENST00000553264 CCNB3Q8WWL7 1395 aa18.49■□□□□ 0.55
XRCC3-202ENST00000553264 ANP32EQ9BTT0 268 aa18.48■□□□□ 0.55
XRCC3-202ENST00000553264 BCANQ96GW7 911 aa18.48■□□□□ 0.55
XRCC3-202ENST00000553264 RAB3GAP2Q9H2M9 1393 aa18.4■□□□□ 0.54
XRCC3-202ENST00000553264 FKBP8Q14318 412 aa18.4■□□□□ 0.54
XRCC3-202ENST00000553264 DDX10Q13206 875 aaKnown RBP18.39■□□□□ 0.53
XRCC3-202ENST00000553264 KIF21AQ7Z4S6 1674 aa18.39■□□□□ 0.53
XRCC3-202ENST00000553264 FHOD3Q2V2M9 1422 aa18.38■□□□□ 0.53
XRCC3-202ENST00000553264 GAPVD1Q14C86 1478 aa18.38■□□□□ 0.53
XRCC3-202ENST00000553264 FHAD1B1AJZ9 1412 aa18.37■□□□□ 0.53
XRCC3-202ENST00000553264 CUL7Q14999 1698 aa18.37■□□□□ 0.53
XRCC3-202ENST00000553264 TIAM1Q13009 1591 aa18.35■□□□□ 0.53
XRCC3-202ENST00000553264 MAPKBP1O60336 1514 aa18.35■□□□□ 0.53
XRCC3-202ENST00000553264 WDR97A6NE52 1622 aa18.33■□□□□ 0.53
XRCC3-202ENST00000553264 LRRC9Q6ZRR7 1453 aa18.32■□□□□ 0.52
XRCC3-202ENST00000553264 SIN3AQ96ST3 1273 aa18.31■□□□□ 0.52
XRCC3-202ENST00000553264 ABCA5Q8WWZ7 1642 aa18.31■□□□□ 0.52
XRCC3-202ENST00000553264 MAP3K1Q13233 1512 aa18.3■□□□□ 0.52
XRCC3-202ENST00000553264 PCF11O94913 1555 aaKnown RBP18.29■□□□□ 0.52
XRCC3-202ENST00000553264 NEFLP07196 543 aa18.28■□□□□ 0.52
XRCC3-202ENST00000553264 SETD5Q9C0A6 1442 aa18.28■□□□□ 0.52
XRCC3-202ENST00000553264 EFCAB5A4FU69 1503 aa18.27■□□□□ 0.52
XRCC3-202ENST00000553264 PHLDB1Q86UU1 1377 aa18.26■□□□□ 0.51
XRCC3-202ENST00000553264 HIRIP3Q9BW71 556 aaPredicted RBP18.26■□□□□ 0.51
XRCC3-202ENST00000553264 FAM50AQ14320 339 aaKnown RBP18.26■□□□□ 0.51
XRCC3-202ENST00000553264 CTTNBP2Q8WZ74 1663 aa18.26■□□□□ 0.51
XRCC3-202ENST00000553264 TRIM52Q96A61 297 aa18.25■□□□□ 0.51
XRCC3-202ENST00000553264 AQRO60306 1485 aaKnown RBP eCLIP18.25■□□□□ 0.516e-6■■■■□ 25.1
XRCC3-202ENST00000553264 TARBP1Q13395 1621 aaKnown RBP18.25■□□□□ 0.51
XRCC3-202ENST00000553264 PPP1R15AO75807 674 aaPredicted RBP18.25■□□□□ 0.51
XRCC3-202ENST00000553264 CASKIN1Q8WXD9 1431 aa18.23■□□□□ 0.51
XRCC3-202ENST00000553264 FMN1Q68DA7 1419 aa18.22■□□□□ 0.51
XRCC3-202ENST00000553264 RBM19Q9Y4C8 960 aaKnown RBP18.22■□□□□ 0.51
XRCC3-202ENST00000553264 FYCO1Q9BQS8 1478 aa18.22■□□□□ 0.51
XRCC3-202ENST00000553264 MRC2Q9UBG0 1479 aa18.22■□□□□ 0.51
XRCC3-202ENST00000553264 ANP32CO43423 234 aa18.19■□□□□ 0.5
XRCC3-202ENST00000553264 BCL11AQ9H165 835 aa18.18■□□□□ 0.5
XRCC3-202ENST00000553264 CFAP43Q8NDM7 1665 aa18.17■□□□□ 0.5
XRCC3-202ENST00000553264 CCER2I3L3R5 266 aa18.17■□□□□ 0.5
XRCC3-202ENST00000553264 ARID3CA6NKF2 412 aa18.15■□□□□ 0.5
XRCC3-202ENST00000553264 TIMELESSQ9UNS1 1208 aa18.14■□□□□ 0.49
XRCC3-202ENST00000553264 SNAPC4Q5SXM2 1469 aa18.14■□□□□ 0.49
XRCC3-202ENST00000553264 MTUS2Q5JR59 1369 aa18.13■□□□□ 0.49
XRCC3-202ENST00000553264 SAMD9Q5K651 1589 aa18.12■□□□□ 0.49
XRCC3-202ENST00000553264 ZNF608Q9ULD9 1512 aaPredicted RBP18.12■□□□□ 0.49
XRCC3-202ENST00000553264 GRIN2BQ13224 1484 aa18.1■□□□□ 0.49
XRCC3-202ENST00000553264 PBRM1Q86U86 1689 aa18.1■□□□□ 0.49
XRCC3-202ENST00000553264 IFT140Q96RY7 1462 aa18.08■□□□□ 0.48
XRCC3-202ENST00000553264 ERCC6Q03468 1493 aa18.07■□□□□ 0.48
XRCC3-202ENST00000553264 ADAMTS12P58397 1594 aa18.05■□□□□ 0.48
XRCC3-202ENST00000553264 WDR62O43379 1518 aa18.05■□□□□ 0.48
XRCC3-202ENST00000553264 TONSLQ96HA7 1378 aa18.03■□□□□ 0.48
XRCC3-202ENST00000553264 FGD6Q6ZV73 1430 aa18.03■□□□□ 0.48
XRCC3-202ENST00000553264 IQGAP2Q13576 1575 aa18.03■□□□□ 0.48
XRCC3-202ENST00000553264 MSH5O43196 834 aa18■□□□□ 0.47
XRCC3-202ENST00000553264 LRRIQ1Q96JM4 1722 aa17.99■□□□□ 0.47
XRCC3-202ENST00000553264 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.99■□□□□ 0.47
XRCC3-202ENST00000553264 IRX6P78412 446 aaPredicted RBP17.99■□□□□ 0.47
XRCC3-202ENST00000553264 NCOA2Q15596 1464 aa17.99■□□□□ 0.47
XRCC3-202ENST00000553264 HNRNPUQ00839 825 aaKnown RBP eCLIP17.98■□□□□ 0.47
XRCC3-202ENST00000553264 FBLN2P98095 1184 aa17.97■□□□□ 0.47
XRCC3-202ENST00000553264 MYOM3Q5VTT5 1437 aa17.95■□□□□ 0.46
XRCC3-202ENST00000553264 CHMP7Q8WUX9 453 aaPredicted RBP17.95■□□□□ 0.46
XRCC3-202ENST00000553264 THOC2Q8NI27 1593 aaKnown RBP17.94■□□□□ 0.46
XRCC3-202ENST00000553264 CDK11AQ9UQ88 783 aaPredicted RBP17.94■□□□□ 0.46
XRCC3-202ENST00000553264 EIF4G3O43432 1585 aaKnown RBP17.93■□□□□ 0.46
XRCC3-202ENST00000553264 MAGI3Q5TCQ9 1506 aa17.93■□□□□ 0.46
XRCC3-202ENST00000553264 CCDC18Q5T9S5 1454 aa17.92■□□□□ 0.46
XRCC3-202ENST00000553264 PTPRKQ15262 1439 aa17.92■□□□□ 0.46
XRCC3-202ENST00000553264 EHBP1L1Q8N3D4 1523 aa17.92■□□□□ 0.46
XRCC3-202ENST00000553264 KIAA0586Q9BVV6 1533 aa17.92■□□□□ 0.46
XRCC3-202ENST00000553264 EPRSP07814 1512 aaKnown RBP17.91■□□□□ 0.46
XRCC3-202ENST00000553264 GRIN2AQ12879 1464 aa17.91■□□□□ 0.46
XRCC3-202ENST00000553264 SUPT6HQ7KZ85 1726 aaKnown RBP17.9■□□□□ 0.46
XRCC3-202ENST00000553264 UGGT2Q9NYU1 1516 aa17.9■□□□□ 0.46
XRCC3-202ENST00000553264 CDK13Q14004 1512 aaKnown RBP17.89■□□□□ 0.46
XRCC3-202ENST00000553264 ERICH6Q7L0X2 663 aa17.89■□□□□ 0.45
XRCC3-202ENST00000553264 HECW1Q76N89 1606 aa17.89■□□□□ 0.45
XRCC3-202ENST00000553264 FANCIQ9NVI1 1328 aa17.89■□□□□ 0.45
XRCC3-202ENST00000553264 CHIC2Q9UKJ5 165 aa17.87■□□□□ 0.45
XRCC3-202ENST00000553264 UACAQ9BZF9 1416 aa17.86■□□□□ 0.45
XRCC3-202ENST00000553264 DISP1Q96F81 1524 aa17.86■□□□□ 0.45
XRCC3-202ENST00000553264 HFM1A2PYH4 1435 aa17.84■□□□□ 0.45
XRCC3-202ENST00000553264 RRP7BPQ9NSQ0 103 aa17.84■□□□□ 0.45
XRCC3-202ENST00000553264 MAGI1Q96QZ7 1491 aaPredicted RBP17.83■□□□□ 0.44
XRCC3-202ENST00000553264 ARHGEF11O15085 1522 aa17.83■□□□□ 0.44
XRCC3-202ENST00000553264 PTPN23Q9H3S7 1636 aa17.83■□□□□ 0.44
XRCC3-202ENST00000553264 KIAA0556O60303 1618 aa17.82■□□□□ 0.44
XRCC3-202ENST00000553264 WASHC2AQ641Q2 1341 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms