RNA–Protein interactions for RNA: ENST00000553264.5

XRCC3-202, Transcript of X-ray repair cross complementing 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene XRCC3, Length 3,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-202ENST00000553264 NISCHQ9Y2I1 1504 aa26.35■■□□□ 1.81
XRCC3-202ENST00000553264 CCDC180Q9P1Z9 1646 aa22.49■■□□□ 1.19
XRCC3-202ENST00000553264 SHROOM4Q9ULL8 1493 aa22.3■■□□□ 1.16
XRCC3-202ENST00000553264 ZCCHC6Q5VYS8 1495 aaKnown RBP22.2■■□□□ 1.14
XRCC3-202ENST00000553264 DCAF8L2P0C7V8 631 aa22.11■■□□□ 1.13
XRCC3-202ENST00000553264 SUPT5HO00267 1087 aaKnown RBP21.93■■□□□ 1.1
XRCC3-202ENST00000553264 DCAF1Q9Y4B6 1507 aa21.59■■□□□ 1.05
XRCC3-202ENST00000553264 HRCP23327 699 aa21.57■■□□□ 1.04
XRCC3-202ENST00000553264 MYO15BQ96JP2 1530 aa21.45■■□□□ 1.02
XRCC3-202ENST00000553264 CHIC1Q5VXU3 224 aa21.43■■□□□ 1.02
XRCC3-202ENST00000553264 PCGF6Q9BYE7 350 aa21.34■■□□□ 1.01
XRCC3-202ENST00000553264 ABCC9O60706 1549 aa21.2■□□□□ 0.98
XRCC3-202ENST00000553264 PPARGC1BQ86YN6 1023 aaKnown RBP21.16■□□□□ 0.98
XRCC3-202ENST00000553264 SCRIBQ14160 1630 aa21.08■□□□□ 0.96
XRCC3-202ENST00000553264 NACADO15069 1562 aa20.92■□□□□ 0.94
XRCC3-202ENST00000553264 LOC105371045A0A1W2PR82 267 aa20.91■□□□□ 0.94
XRCC3-202ENST00000553264 RSF1Q96T23 1441 aaPredicted RBP20.75■□□□□ 0.91
XRCC3-202ENST00000553264 TRIM26Q12899 539 aaPredicted RBP20.72■□□□□ 0.91
XRCC3-202ENST00000553264 RB1CC1Q8TDY2 1594 aa20.65■□□□□ 0.9
XRCC3-202ENST00000553264 CECR2Q9BXF3 1484 aa20.59■□□□□ 0.89
XRCC3-202ENST00000553264 MROH2BQ7Z745 1585 aa20.47■□□□□ 0.87
XRCC3-202ENST00000553264 EHMT2Q96KQ7 1210 aa20.47■□□□□ 0.87
XRCC3-202ENST00000553264 ZEB1P37275 1124 aaPredicted RBP20.44■□□□□ 0.86
XRCC3-202ENST00000553264 WIZO95785 1651 aa20.32■□□□□ 0.84
XRCC3-202ENST00000553264 FAM9AQ8IZU1 332 aaPredicted RBP20.32■□□□□ 0.84
XRCC3-202ENST00000553264 TRIM41Q8WV44 630 aa20.32■□□□□ 0.84
XRCC3-202ENST00000553264 PELP1Q8IZL8 1130 aaKnown RBP20.27■□□□□ 0.83
XRCC3-202ENST00000553264 BAZ1AQ9NRL2 1556 aaPredicted RBP20.26■□□□□ 0.83
XRCC3-202ENST00000553264 PABPN1Q86U42 306 aaKnown RBP eCLIP20.26■□□□□ 0.83
XRCC3-202ENST00000553264 UNC13AQ9UPW8 1703 aa20.25■□□□□ 0.83
XRCC3-202ENST00000553264 SCAF1Q9H7N4 1312 aaKnown RBP20.21■□□□□ 0.83
XRCC3-202ENST00000553264 SMARCA4P51532 1647 aa20.11■□□□□ 0.81
XRCC3-202ENST00000553264 BICRAQ9NZM4 1560 aa20.07■□□□□ 0.8
XRCC3-202ENST00000553264 TOP2AP11388 1531 aaKnown RBP20■□□□□ 0.79
XRCC3-202ENST00000553264 CCDC88BA6NC98 1476 aa19.95■□□□□ 0.78
XRCC3-202ENST00000553264 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.9■□□□□ 0.78
XRCC3-202ENST00000553264 SMARCA2P51531 1590 aa19.88■□□□□ 0.77
XRCC3-202ENST00000553264 CCER1Q8TC90 406 aaPredicted RBP19.86■□□□□ 0.77
XRCC3-202ENST00000553264 EIF4G1Q04637 1599 aaKnown RBP19.84■□□□□ 0.77
XRCC3-202ENST00000553264 ACIN1Q9UKV3 1341 aaKnown RBP19.83■□□□□ 0.77
XRCC3-202ENST00000553264 NEUROD1Q13562 356 aa19.8■□□□□ 0.76
XRCC3-202ENST00000553264 ABCC8Q09428 1581 aa19.78■□□□□ 0.76
XRCC3-202ENST00000553264 PEG3Q9GZU2 1588 aa19.73■□□□□ 0.75
XRCC3-202ENST00000553264 TTBK1Q5TCY1 1321 aaPredicted RBP19.72■□□□□ 0.75
XRCC3-202ENST00000553264 ATAD2BQ9ULI0 1458 aa19.71■□□□□ 0.75
XRCC3-202ENST00000553264 DIEXFQ68CQ4 756 aaKnown RBP19.7■□□□□ 0.74
XRCC3-202ENST00000553264 GTF3C3Q9Y5Q9 886 aa19.67■□□□□ 0.74
XRCC3-202ENST00000553264 CENPBP07199 599 aaPredicted RBP19.65■□□□□ 0.74
XRCC3-202ENST00000553264 BAZ1BQ9UIG0 1483 aaKnown RBP19.65■□□□□ 0.74
XRCC3-202ENST00000553264 SOGA1O94964 1423 aa19.56■□□□□ 0.72
XRCC3-202ENST00000553264 WRNQ14191 1432 aaPredicted RBP eCLIP19.52■□□□□ 0.71
XRCC3-202ENST00000553264 RUSC2Q8N2Y8 1516 aa19.47■□□□□ 0.71
XRCC3-202ENST00000553264 CSRNP3Q8WYN3 585 aa19.46■□□□□ 0.71
XRCC3-202ENST00000553264 CEP162Q5TB80 1403 aa19.44■□□□□ 0.7
XRCC3-202ENST00000553264 ZNF316A6NFI3 1004 aaPredicted RBP19.4■□□□□ 0.7
XRCC3-202ENST00000553264 UBTFP17480 764 aaKnown RBP19.39■□□□□ 0.69
XRCC3-202ENST00000553264 EEA1Q15075 1411 aa19.39■□□□□ 0.69
XRCC3-202ENST00000553264 NCAPD3P42695 1498 aa19.38■□□□□ 0.69
XRCC3-202ENST00000553264 SYNJ1O43426 1573 aa19.38■□□□□ 0.69
XRCC3-202ENST00000553264 YTHDC1Q96MU7 727 aaKnown RBP19.37■□□□□ 0.69
XRCC3-202ENST00000553264 MYT1Q01538 1121 aa19.35■□□□□ 0.69
XRCC3-202ENST00000553264 TNIKQ9UKE5 1360 aa19.33■□□□□ 0.69
XRCC3-202ENST00000553264 HMGXB3Q12766 1538 aa19.31■□□□□ 0.68
XRCC3-202ENST00000553264 RANGAP1P46060 587 aaPredicted RBP19.3■□□□□ 0.68
XRCC3-202ENST00000553264 GOLGA3Q08378 1498 aa19.24■□□□□ 0.67
XRCC3-202ENST00000553264 MIER1Q8N108 512 aa19.23■□□□□ 0.67
XRCC3-202ENST00000553264 HNRNPUL2Q1KMD3 747 aaKnown RBP19.2■□□□□ 0.66
XRCC3-202ENST00000553264 CEP164Q9UPV0 1460 aa19.17■□□□□ 0.66
XRCC3-202ENST00000553264 TOP2BQ02880 1626 aa19.17■□□□□ 0.66
XRCC3-202ENST00000553264 CFTRP13569 1480 aa19.14■□□□□ 0.65
XRCC3-202ENST00000553264 KIF21BO75037 1637 aa19.09■□□□□ 0.65
XRCC3-202ENST00000553264 RAPGEF2Q9Y4G8 1499 aa19.09■□□□□ 0.65
XRCC3-202ENST00000553264 BIVM-ERCC5R4GMW8 1640 aa19.07■□□□□ 0.64
XRCC3-202ENST00000553264 CUX1P39880 1505 aa19.07■□□□□ 0.64
XRCC3-202ENST00000553264 CC2D2AQ9P2K1 1620 aa19.05■□□□□ 0.64
XRCC3-202ENST00000553264 CLIP1P30622 1438 aa19.04■□□□□ 0.64
XRCC3-202ENST00000553264 CADPSQ9ULU8 1353 aa19.02■□□□□ 0.64
XRCC3-202ENST00000553264 APLP2Q06481 763 aa18.98■□□□□ 0.63
XRCC3-202ENST00000553264 KIF27Q86VH2 1401 aa18.95■□□□□ 0.62
XRCC3-202ENST00000553264 VPS8Q8N3P4 1428 aa18.92■□□□□ 0.62
XRCC3-202ENST00000553264 PRXQ9BXM0 1461 aa18.92■□□□□ 0.62
XRCC3-202ENST00000553264 ERICH3Q5RHP9 1530 aa18.86■□□□□ 0.61
XRCC3-202ENST00000553264 PRDM2Q13029 1718 aa18.85■□□□□ 0.61
XRCC3-202ENST00000553264 CUX2O14529 1486 aa18.83■□□□□ 0.61
XRCC3-202ENST00000553264 FANCD2Q9BXW9 1451 aa18.81■□□□□ 0.6
XRCC3-202ENST00000553264 FGD5Q6ZNL6 1462 aa18.8■□□□□ 0.6
XRCC3-202ENST00000553264 SUPT16HQ9Y5B9 1047 aaKnown RBP18.8■□□□□ 0.6
XRCC3-202ENST00000553264 NESP48681 1621 aa18.78■□□□□ 0.6
XRCC3-202ENST00000553264 IGF1RP08069 1367 aa18.78■□□□□ 0.6
XRCC3-202ENST00000553264 DHX57Q6P158 1386 aaKnown RBP18.77■□□□□ 0.59
XRCC3-202ENST00000553264 CLSPNQ9HAW4 1339 aa18.76■□□□□ 0.59
XRCC3-202ENST00000553264 DNAJC5BQ9UF47 199 aa18.74■□□□□ 0.59
XRCC3-202ENST00000553264 ARAP1Q96P48 1450 aa18.72■□□□□ 0.59
XRCC3-202ENST00000553264 CARMIL1Q5VZK9 1371 aa18.71■□□□□ 0.58
XRCC3-202ENST00000553264 RAD54L2Q9Y4B4 1467 aa18.67■□□□□ 0.58
XRCC3-202ENST00000553264 KANK4Q5T7N3 995 aaPredicted RBP18.66■□□□□ 0.58
XRCC3-202ENST00000553264 TOPBP1Q92547 1522 aa18.64■□□□□ 0.57
XRCC3-202ENST00000553264 ARHGAP35Q9NRY4 1499 aa18.64■□□□□ 0.57
XRCC3-202ENST00000553264 DNMBPQ6XZF7 1577 aa18.63■□□□□ 0.57
XRCC3-202ENST00000553264 POLA1P09884 1462 aaPredicted RBP18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms