RNA–Protein interactions for RNA: ENST00000552412.1

CCDC59-206, Transcript of coiled-coil domain containing 59, humanhuman

TSL 3

Gene CCDC59, Length 287 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59-206ENST00000552412 CLIP1P30622 1438 aa10.62□□□□□ -0.71
CCDC59-206ENST00000552412 MYCNP04198 464 aaPredicted RBP10.62□□□□□ -0.71
CCDC59-206ENST00000552412 EHMT2Q96KQ7 1210 aa10.61□□□□□ -0.71
CCDC59-206ENST00000552412 VPS8Q8N3P4 1428 aa10.59□□□□□ -0.71
CCDC59-206ENST00000552412 ZEB1P37275 1124 aaPredicted RBP10.59□□□□□ -0.71
CCDC59-206ENST00000552412 FOXD4L1Q9NU39 408 aa10.59□□□□□ -0.71
CCDC59-206ENST00000552412 FGD5Q6ZNL6 1462 aa10.58□□□□□ -0.72
CCDC59-206ENST00000552412 DSG3P32926 999 aa10.58□□□□□ -0.72
CCDC59-206ENST00000552412 ZNF219Q9P2Y4 722 aaPredicted RBP10.57□□□□□ -0.72
CCDC59-206ENST00000552412 CUX2O14529 1486 aa10.55□□□□□ -0.72
CCDC59-206ENST00000552412 ABCA10Q8WWZ4 1543 aa10.55□□□□□ -0.72
CCDC59-206ENST00000552412 PDS5BQ9NTI5 1447 aa10.55□□□□□ -0.72
CCDC59-206ENST00000552412 TOPBP1Q92547 1522 aa10.54□□□□□ -0.72
CCDC59-206ENST00000552412 ABCB7O75027 752 aa10.53□□□□□ -0.72
CCDC59-206ENST00000552412 IGF1RP08069 1367 aa10.52□□□□□ -0.73
CCDC59-206ENST00000552412 CUL7Q14999 1698 aa10.51□□□□□ -0.73
CCDC59-206ENST00000552412 POLA1P09884 1462 aaPredicted RBP10.51□□□□□ -0.73
CCDC59-206ENST00000552412 WDR97A6NE52 1622 aa10.51□□□□□ -0.73
CCDC59-206ENST00000552412 NESP48681 1621 aa10.5□□□□□ -0.73
CCDC59-206ENST00000552412 CARMIL1Q5VZK9 1371 aa10.48□□□□□ -0.73
CCDC59-206ENST00000552412 ARAP1Q96P48 1450 aa10.48□□□□□ -0.73
CCDC59-206ENST00000552412 URB2Q14146 1524 aaKnown RBP10.47□□□□□ -0.73
CCDC59-206ENST00000552412 ABCA5Q8WWZ7 1642 aa10.45□□□□□ -0.74
CCDC59-206ENST00000552412 ZBTB22O15209 634 aa10.45□□□□□ -0.74
CCDC59-206ENST00000552412 KIF21AQ7Z4S6 1674 aa10.44□□□□□ -0.74
CCDC59-206ENST00000552412 MAP3K1Q13233 1512 aa10.44□□□□□ -0.74
CCDC59-206ENST00000552412 ARHGAP35Q9NRY4 1499 aa10.43□□□□□ -0.74
CCDC59-206ENST00000552412 EFCAB5A4FU69 1503 aa10.42□□□□□ -0.74
CCDC59-206ENST00000552412 RAD54L2Q9Y4B4 1467 aa10.42□□□□□ -0.74
CCDC59-206ENST00000552412 CTTNBP2Q8WZ74 1663 aa10.41□□□□□ -0.74
CCDC59-206ENST00000552412 MRC2Q9UBG0 1479 aa10.39□□□□□ -0.75
CCDC59-206ENST00000552412 TARBP1Q13395 1621 aaKnown RBP10.39□□□□□ -0.75
CCDC59-206ENST00000552412 FHAD1B1AJZ9 1412 aa10.39□□□□□ -0.75
CCDC59-206ENST00000552412 PPARGC1BQ86YN6 1023 aaKnown RBP10.38□□□□□ -0.75
CCDC59-206ENST00000552412 GAPVD1Q14C86 1478 aa10.37□□□□□ -0.75
CCDC59-206ENST00000552412 POLA2Q14181 598 aa10.37□□□□□ -0.75
CCDC59-206ENST00000552412 AQRO60306 1485 aaKnown RBP eCLIP10.36□□□□□ -0.75
CCDC59-206ENST00000552412 ATF5Q9Y2D1 282 aaPredicted RBP10.35□□□□□ -0.75
CCDC59-206ENST00000552412 WDR62O43379 1518 aa10.34□□□□□ -0.75
CCDC59-206ENST00000552412 TIAM1Q13009 1591 aa10.33□□□□□ -0.76
CCDC59-206ENST00000552412 CFAP43Q8NDM7 1665 aa10.33□□□□□ -0.76
CCDC59-206ENST00000552412 RRBP1Q9P2E9 1410 aaKnown RBP10.33□□□□□ -0.76
CCDC59-206ENST00000552412 PBRM1Q86U86 1689 aa10.32□□□□□ -0.76
CCDC59-206ENST00000552412 FYCO1Q9BQS8 1478 aa10.32□□□□□ -0.76
CCDC59-206ENST00000552412 IFT140Q96RY7 1462 aa10.31□□□□□ -0.76
CCDC59-206ENST00000552412 SAMD9Q5K651 1589 aa10.31□□□□□ -0.76
CCDC59-206ENST00000552412 CCER1Q8TC90 406 aaPredicted RBP10.3□□□□□ -0.76
CCDC59-206ENST00000552412 FMN1Q68DA7 1419 aa10.3□□□□□ -0.76
CCDC59-206ENST00000552412 THOC2Q8NI27 1593 aaKnown RBP10.3□□□□□ -0.76
CCDC59-206ENST00000552412 ADAMTS12P58397 1594 aa10.29□□□□□ -0.76
CCDC59-206ENST00000552412 PCF11O94913 1555 aaKnown RBP10.28□□□□□ -0.76
CCDC59-206ENST00000552412 CASKIN1Q8WXD9 1431 aa10.28□□□□□ -0.76
CCDC59-206ENST00000552412 GRIN2BQ13224 1484 aa10.28□□□□□ -0.76
CCDC59-206ENST00000552412 TDRD9Q8NDG6 1382 aaKnown RBP10.27□□□□□ -0.76
CCDC59-206ENST00000552412 RANGAP1P46060 587 aaPredicted RBP10.27□□□□□ -0.77
CCDC59-206ENST00000552412 LRRC9Q6ZRR7 1453 aa10.27□□□□□ -0.77
CCDC59-206ENST00000552412 TTBK1Q5TCY1 1321 aaPredicted RBP10.26□□□□□ -0.77
CCDC59-206ENST00000552412 CLSPNQ9HAW4 1339 aa10.26□□□□□ -0.77
CCDC59-206ENST00000552412 CCNB3Q8WWL7 1395 aa10.25□□□□□ -0.77
CCDC59-206ENST00000552412 ATXN8OSP0DMR3 200 aa10.23□□□□□ -0.77
CCDC59-206ENST00000552412 KANK4Q5T7N3 995 aaPredicted RBP10.23□□□□□ -0.77
CCDC59-206ENST00000552412 FHOD3Q2V2M9 1422 aa10.23□□□□□ -0.77
CCDC59-206ENST00000552412 SNAPC4Q5SXM2 1469 aa10.23□□□□□ -0.77
CCDC59-206ENST00000552412 IQGAP2Q13576 1575 aa10.22□□□□□ -0.77
CCDC59-206ENST00000552412 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.22□□□□□ -0.77
CCDC59-206ENST00000552412 ERCC6Q03468 1493 aa10.21□□□□□ -0.78
CCDC59-206ENST00000552412 MAGI1Q96QZ7 1491 aaPredicted RBP10.2□□□□□ -0.78
CCDC59-206ENST00000552412 UGGT2Q9NYU1 1516 aa10.2□□□□□ -0.78
CCDC59-206ENST00000552412 EIF4G3O43432 1585 aaKnown RBP10.19□□□□□ -0.78
CCDC59-206ENST00000552412 CCDC18Q5T9S5 1454 aa10.19□□□□□ -0.78
CCDC59-206ENST00000552412 HECW1Q76N89 1606 aa10.17□□□□□ -0.78
CCDC59-206ENST00000552412 EHBP1L1Q8N3D4 1523 aa10.17□□□□□ -0.78
CCDC59-206ENST00000552412 KIAA0586Q9BVV6 1533 aa10.17□□□□□ -0.78
CCDC59-206ENST00000552412 ZNF608Q9ULD9 1512 aaPredicted RBP10.15□□□□□ -0.78
CCDC59-206ENST00000552412 GRIN2AQ12879 1464 aa10.15□□□□□ -0.78
CCDC59-206ENST00000552412 ZBTB12Q9Y330 459 aaPredicted RBP10.14□□□□□ -0.79
CCDC59-206ENST00000552412 PHLDB1Q86UU1 1377 aa10.14□□□□□ -0.79
CCDC59-206ENST00000552412 SUPT6HQ7KZ85 1726 aaKnown RBP10.13□□□□□ -0.79
CCDC59-206ENST00000552412 RBM42Q9BTD8 480 aaKnown RBP10.13□□□□□ -0.79
CCDC59-206ENST00000552412 LRRIQ1Q96JM4 1722 aa10.13□□□□□ -0.79
CCDC59-206ENST00000552412 SYNJ2O15056 1496 aa10.12□□□□□ -0.79
CCDC59-206ENST00000552412 KIAA0556O60303 1618 aa10.11□□□□□ -0.79
CCDC59-206ENST00000552412 ARHGEF11O15085 1522 aa10.11□□□□□ -0.79
CCDC59-206ENST00000552412 MTUS2Q5JR59 1369 aa10.11□□□□□ -0.79
CCDC59-206ENST00000552412 DHX57Q6P158 1386 aaKnown RBP10.11□□□□□ -0.79
CCDC59-206ENST00000552412 FGD6Q6ZV73 1430 aa10.1□□□□□ -0.79
CCDC59-206ENST00000552412 P3H3Q8IVL6 736 aa10.1□□□□□ -0.79
CCDC59-206ENST00000552412 NUP160Q12769 1436 aa10.08□□□□□ -0.8
CCDC59-206ENST00000552412 SETD5Q9C0A6 1442 aa10.08□□□□□ -0.8
CCDC59-206ENST00000552412 MYOM3Q5VTT5 1437 aa10.07□□□□□ -0.8
CCDC59-206ENST00000552412 EPRSP07814 1512 aaKnown RBP10.07□□□□□ -0.8
CCDC59-206ENST00000552412 DISP1Q96F81 1524 aa10.07□□□□□ -0.8
CCDC59-206ENST00000552412 NCOA2Q15596 1464 aa10.07□□□□□ -0.8
CCDC59-206ENST00000552412 TCOF1Q13428 1488 aaKnown RBP10.05□□□□□ -0.8
CCDC59-206ENST00000552412 POTEHQ6S545 545 aa10.05□□□□□ -0.8
CCDC59-206ENST00000552412 CEP170Q5SW79 1584 aa10.05□□□□□ -0.8
CCDC59-206ENST00000552412 RAPGEF6Q8TEU7 1601 aa10.04□□□□□ -0.8
CCDC59-206ENST00000552412 RAB3GAP2Q9H2M9 1393 aa10.04□□□□□ -0.8
CCDC59-206ENST00000552412 ATP1B4Q9UN42 357 aaPredicted RBP10.04□□□□□ -0.8
CCDC59-206ENST00000552412 MIA2Q96PC5 1412 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms