RNA–Protein interactions for RNA: ENST00000551787.5

BRF1-219, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 824 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-219ENST00000551787 PRG4Q92954 1404 aaPredicted RBP28.35■■■□□ 2.13
BRF1-219ENST00000551787 SHROOM2Q13796 1616 aa28.32■■■□□ 2.12
BRF1-219ENST00000551787 KIAA0586Q9BVV6 1533 aa28.28■■■□□ 2.12
BRF1-219ENST00000551787 TRHP20396 242 aaPredicted RBP28.27■■■□□ 2.12
BRF1-219ENST00000551787 RAPGEF2Q9Y4G8 1499 aa28.21■■■□□ 2.11
BRF1-219ENST00000551787 TTBK1Q5TCY1 1321 aaPredicted RBP28.13■■■□□ 2.09
BRF1-219ENST00000551787 CHIC1Q5VXU3 224 aa28.09■■■□□ 2.09
BRF1-219ENST00000551787 FAM9AQ8IZU1 332 aaPredicted RBP28.08■■■□□ 2.09
BRF1-219ENST00000551787 CSRNP3Q8WYN3 585 aa28.08■■■□□ 2.09
BRF1-219ENST00000551787 IQGAP2Q13576 1575 aa28.04■■■□□ 2.08
BRF1-219ENST00000551787 PRXQ9BXM0 1461 aa28.04■■■□□ 2.08
BRF1-219ENST00000551787 CARMIL2Q6F5E8 1435 aa28■■■□□ 2.07
BRF1-219ENST00000551787 PTPRGP23470 1445 aa27.99■■■□□ 2.07
BRF1-219ENST00000551787 TNIKQ9UKE5 1360 aa27.95■■■□□ 2.06
BRF1-219ENST00000551787 NPM1P06748 294 aaKnown RBP eCLIP27.94■■■□□ 2.06
BRF1-219ENST00000551787 DISP1Q96F81 1524 aa27.92■■■□□ 2.06
BRF1-219ENST00000551787 UGGT2Q9NYU1 1516 aa27.89■■■□□ 2.06
BRF1-219ENST00000551787 EEA1Q15075 1411 aa27.89■■■□□ 2.06
BRF1-219ENST00000551787 ADCY10Q96PN6 1610 aa27.85■■■□□ 2.05
BRF1-219ENST00000551787 CTTNBP2Q8WZ74 1663 aa27.81■■■□□ 2.04
BRF1-219ENST00000551787 EHMT2Q96KQ7 1210 aa27.81■■■□□ 2.04
BRF1-219ENST00000551787 P3H3Q8IVL6 736 aa27.78■■■□□ 2.04
BRF1-219ENST00000551787 KIAA0556O60303 1618 aa27.78■■■□□ 2.04
BRF1-219ENST00000551787 RANGAP1P46060 587 aaPredicted RBP27.77■■■□□ 2.04
BRF1-219ENST00000551787 UACAQ9BZF9 1416 aa27.75■■■□□ 2.03
BRF1-219ENST00000551787 FAM69CQ0P6D2 419 aa27.74■■■□□ 2.03
BRF1-219ENST00000551787 GOLGA3Q08378 1498 aa27.73■■■□□ 2.03
BRF1-219ENST00000551787 ABCC2Q92887 1545 aa27.69■■■□□ 2.02
BRF1-219ENST00000551787 MAPKBP1O60336 1514 aa27.67■■■□□ 2.02
BRF1-219ENST00000551787 UHRF1BP1LA0JNW5 1464 aa27.67■■■□□ 2.02
BRF1-219ENST00000551787 ABCC10Q5T3U5 1492 aa27.65■■■□□ 2.02
BRF1-219ENST00000551787 PLB1Q6P1J6 1458 aa27.64■■■□□ 2.01
BRF1-219ENST00000551787 UBTFP17480 764 aaKnown RBP27.63■■■□□ 2.01
BRF1-219ENST00000551787 KIF21BO75037 1637 aa27.6■■■□□ 2.01
BRF1-219ENST00000551787 KIF13AQ9H1H9 1805 aa27.6■■■□□ 2.01
BRF1-219ENST00000551787 ASXL2Q76L83 1435 aa27.58■■■□□ 2.01
BRF1-219ENST00000551787 ARID3CA6NKF2 412 aa27.56■■■□□ 2
BRF1-219ENST00000551787 KDM5BQ9UGL1 1544 aa27.56■■■□□ 2
BRF1-219ENST00000551787 DIP2BQ9P265 1576 aa27.55■■■□□ 2
BRF1-219ENST00000551787 ABCA8O94911 1581 aa27.5■■□□□ 1.99
BRF1-219ENST00000551787 SAMD9Q5K651 1589 aa27.49■■□□□ 1.99
BRF1-219ENST00000551787 ZCCHC11Q5TAX3 1644 aaKnown RBP27.47■■□□□ 1.99
BRF1-219ENST00000551787 FHOD3Q2V2M9 1422 aa27.47■■□□□ 1.99
BRF1-219ENST00000551787 KCNH8Q96L42 1107 aa27.43■■□□□ 1.98
BRF1-219ENST00000551787 EPRSP07814 1512 aaKnown RBP27.39■■□□□ 1.98
BRF1-219ENST00000551787 TSPOAP1O95153 1857 aa27.38■■□□□ 1.97
BRF1-219ENST00000551787 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.37■■□□□ 1.97
BRF1-219ENST00000551787 HNRNPUL2Q1KMD3 747 aaKnown RBP27.37■■□□□ 1.97
BRF1-219ENST00000551787 ATP10BO94823 1461 aa27.37■■□□□ 1.97
BRF1-219ENST00000551787 WDR7Q9Y4E6 1490 aa27.36■■□□□ 1.97
BRF1-219ENST00000551787 GLI2P10070 1586 aa27.34■■□□□ 1.97
BRF1-219ENST00000551787 EFCAB5A4FU69 1503 aa27.32■■□□□ 1.96
BRF1-219ENST00000551787 RAPGEF6Q8TEU7 1601 aa27.3■■□□□ 1.96
BRF1-219ENST00000551787 NUP153P49790 1475 aaKnown RBP27.27■■□□□ 1.96
BRF1-219ENST00000551787 ARHGAP35Q9NRY4 1499 aa27.26■■□□□ 1.95
BRF1-219ENST00000551787 ATP1B4Q9UN42 357 aaPredicted RBP27.26■■□□□ 1.95
BRF1-219ENST00000551787 CD109Q6YHK3 1445 aa27.2■■□□□ 1.94
BRF1-219ENST00000551787 PPRC1Q5VV67 1664 aaKnown RBP27.2■■□□□ 1.94
BRF1-219ENST00000551787 MAP3K4Q9Y6R4 1608 aa27.19■■□□□ 1.94
BRF1-219ENST00000551787 KDM6BO15054 1643 aa27.19■■□□□ 1.94
BRF1-219ENST00000551787 PLEKHD1A6NEE1 506 aa27.16■■□□□ 1.94
BRF1-219ENST00000551787 FMN1Q68DA7 1419 aa27.15■■□□□ 1.94
BRF1-219ENST00000551787 TEX14Q8IWB6 1497 aa27.13■■□□□ 1.93
BRF1-219ENST00000551787 COL17A1Q9UMD9 1497 aaPredicted RBP27.12■■□□□ 1.93
BRF1-219ENST00000551787 CDK13Q14004 1512 aaKnown RBP27.08■■□□□ 1.93
BRF1-219ENST00000551787 MAGI3Q5TCQ9 1506 aa27.06■■□□□ 1.92
BRF1-219ENST00000551787 CLIP1P30622 1438 aa27.06■■□□□ 1.92
BRF1-219ENST00000551787 CFAP43Q8NDM7 1665 aa27.05■■□□□ 1.92
BRF1-219ENST00000551787 LOC105371045A0A1W2PR82 267 aa27.05■■□□□ 1.92
BRF1-219ENST00000551787 ABCA9Q8IUA7 1624 aa26.99■■□□□ 1.91
BRF1-219ENST00000551787 HECW1Q76N89 1606 aa26.98■■□□□ 1.91
BRF1-219ENST00000551787 AEBP2Q6ZN18 517 aaPredicted RBP26.97■■□□□ 1.91
BRF1-219ENST00000551787 CDK11AQ9UQ88 783 aaPredicted RBP26.96■■□□□ 1.91
BRF1-219ENST00000551787 CASKIN1Q8WXD9 1431 aa26.93■■□□□ 1.9
BRF1-219ENST00000551787 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.9■■□□□ 1.9
BRF1-219ENST00000551787 RAPGEF3O95398 923 aa26.89■■□□□ 1.9
BRF1-219ENST00000551787 PCF11O94913 1555 aaKnown RBP26.88■■□□□ 1.89
BRF1-219ENST00000551787 CEP162Q5TB80 1403 aa26.87■■□□□ 1.89
BRF1-219ENST00000551787 ARAP3Q8WWN8 1544 aa26.85■■□□□ 1.89
BRF1-219ENST00000551787 PHLDB1Q86UU1 1377 aa26.84■■□□□ 1.89
BRF1-219ENST00000551787 TTC37Q6PGP7 1564 aa26.84■■□□□ 1.89
BRF1-219ENST00000551787 LRRIQ1Q96JM4 1722 aa26.84■■□□□ 1.89
BRF1-219ENST00000551787 NEO1Q92859 1461 aa26.83■■□□□ 1.89
BRF1-219ENST00000551787 KDM4FA0A1W2PPD8 638 aa26.83■■□□□ 1.89
BRF1-219ENST00000551787 TROQ12816 1431 aaPredicted RBP26.82■■□□□ 1.88
BRF1-219ENST00000551787 FANCAO15360 1455 aa26.8■■□□□ 1.88
BRF1-219ENST00000551787 FYCO1Q9BQS8 1478 aa26.8■■□□□ 1.88
BRF1-219ENST00000551787 CCDC18Q5T9S5 1454 aa26.79■■□□□ 1.88
BRF1-219ENST00000551787 AKNAQ7Z591 1439 aa26.78■■□□□ 1.88
BRF1-219ENST00000551787 KIF14Q15058 1648 aa26.77■■□□□ 1.88
BRF1-219ENST00000551787 PLCH2O75038 1416 aa26.77■■□□□ 1.88
BRF1-219ENST00000551787 EFCAB2Q5VUJ9 269 aa26.73■■□□□ 1.87
BRF1-219ENST00000551787 DENND4BO75064 1496 aaPredicted RBP26.69■■□□□ 1.86
BRF1-219ENST00000551787 SCAPERQ9BY12 1400 aa26.66■■□□□ 1.86
BRF1-219ENST00000551787 ADGRL1O94910 1474 aa26.65■■□□□ 1.86
BRF1-219ENST00000551787 FRMPD1Q5SYB0 1578 aa26.63■■□□□ 1.85
BRF1-219ENST00000551787 CFAP74Q9C0B2 1584 aa26.63■■□□□ 1.85
BRF1-219ENST00000551787 ARHGAP5Q13017 1502 aa26.63■■□□□ 1.85
BRF1-219ENST00000551787 MYO5CQ9NQX4 1742 aa26.62■■□□□ 1.85
BRF1-219ENST00000551787 MTUS2Q5JR59 1369 aa26.6■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms