RNA–Protein interactions for RNA: ENST00000551787.5

BRF1-219, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 824 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-219ENST00000551787 NISCHQ9Y2I1 1504 aa40.77■■■■■ 4.12
BRF1-219ENST00000551787 CCDC180Q9P1Z9 1646 aa36.17■■■■□ 3.38
BRF1-219ENST00000551787 ABCC9O60706 1549 aa35.88■■■■□ 3.33
BRF1-219ENST00000551787 DCAF8L2P0C7V8 631 aa34.46■■■■□ 3.11
BRF1-219ENST00000551787 RB1CC1Q8TDY2 1594 aa34.25■■■■□ 3.07
BRF1-219ENST00000551787 NACADO15069 1562 aa34.15■■■■□ 3.06
BRF1-219ENST00000551787 ZCCHC6Q5VYS8 1495 aaKnown RBP33.88■■■■□ 3.01
BRF1-219ENST00000551787 MYO15BQ96JP2 1530 aa33.8■■■■□ 3
BRF1-219ENST00000551787 PABPN1Q86U42 306 aaKnown RBP eCLIP33.62■■■□□ 2.97
BRF1-219ENST00000551787 DCAF1Q9Y4B6 1507 aa33.61■■■□□ 2.97
BRF1-219ENST00000551787 UNC13AQ9UPW8 1703 aa33.42■■■□□ 2.94
BRF1-219ENST00000551787 BICRAQ9NZM4 1560 aa33.26■■■□□ 2.92
BRF1-219ENST00000551787 DNAJC5BQ9UF47 199 aa33.26■■■□□ 2.91
BRF1-219ENST00000551787 SCRIBQ14160 1630 aa33.17■■■□□ 2.9
BRF1-219ENST00000551787 SHROOM4Q9ULL8 1493 aa32.74■■■□□ 2.83
BRF1-219ENST00000551787 EIF4G1Q04637 1599 aaKnown RBP32.41■■■□□ 2.78
BRF1-219ENST00000551787 CC2D2AQ9P2K1 1620 aa32.35■■■□□ 2.77
BRF1-219ENST00000551787 CECR2Q9BXF3 1484 aa32.23■■■□□ 2.75
BRF1-219ENST00000551787 SMARCA4P51532 1647 aa31.64■■■□□ 2.66
BRF1-219ENST00000551787 ATAD2BQ9ULI0 1458 aa31.6■■■□□ 2.65
BRF1-219ENST00000551787 NCAPD3P42695 1498 aa31.58■■■□□ 2.65
BRF1-219ENST00000551787 BAZ1AQ9NRL2 1556 aaPredicted RBP31.57■■■□□ 2.64
BRF1-219ENST00000551787 MROH2BQ7Z745 1585 aa31.47■■■□□ 2.63
BRF1-219ENST00000551787 SMARCA2P51531 1590 aa31.47■■■□□ 2.63
BRF1-219ENST00000551787 HMGXB3Q12766 1538 aa31.31■■■□□ 2.6
BRF1-219ENST00000551787 BAZ1BQ9UIG0 1483 aaKnown RBP31.31■■■□□ 2.6
BRF1-219ENST00000551787 PEG3Q9GZU2 1588 aa31.27■■■□□ 2.6
BRF1-219ENST00000551787 WIZO95785 1651 aa31.09■■■□□ 2.57
BRF1-219ENST00000551787 RSF1Q96T23 1441 aaPredicted RBP31.06■■■□□ 2.56
BRF1-219ENST00000551787 NESP48681 1621 aa30.98■■■□□ 2.55
BRF1-219ENST00000551787 ERCC6Q03468 1493 aa30.9■■■□□ 2.54
BRF1-219ENST00000551787 LAMC3Q9Y6N6 1575 aa30.71■■■□□ 2.51
BRF1-219ENST00000551787 CADPSQ9ULU8 1353 aa30.7■■■□□ 2.51
BRF1-219ENST00000551787 TOP2AP11388 1531 aaKnown RBP30.69■■■□□ 2.5
BRF1-219ENST00000551787 PDS5BQ9NTI5 1447 aa30.61■■■□□ 2.49
BRF1-219ENST00000551787 CUX2O14529 1486 aa30.54■■■□□ 2.48
BRF1-219ENST00000551787 KIF21AQ7Z4S6 1674 aa30.48■■■□□ 2.47
BRF1-219ENST00000551787 CCDC88BA6NC98 1476 aa30.44■■■□□ 2.46
BRF1-219ENST00000551787 CFTRP13569 1480 aa30.43■■■□□ 2.46
BRF1-219ENST00000551787 THOC2Q8NI27 1593 aaKnown RBP30.4■■■□□ 2.46
BRF1-219ENST00000551787 FANCD2Q9BXW9 1451 aa30.34■■■□□ 2.45
BRF1-219ENST00000551787 SUPT5HO00267 1087 aaKnown RBP30.3■■■□□ 2.44
BRF1-219ENST00000551787 CEP164Q9UPV0 1460 aa30.29■■■□□ 2.44
BRF1-219ENST00000551787 MRC2Q9UBG0 1479 aa30.28■■■□□ 2.44
BRF1-219ENST00000551787 WDR62O43379 1518 aa30.14■■■□□ 2.42
BRF1-219ENST00000551787 URB2Q14146 1524 aaKnown RBP30.05■■■□□ 2.4
BRF1-219ENST00000551787 DNAJC5Q9H3Z4 198 aa30.03■■■□□ 2.4
BRF1-219ENST00000551787 PRDM2Q13029 1718 aa29.99■■■□□ 2.39
BRF1-219ENST00000551787 TOPBP1Q92547 1522 aa29.81■■■□□ 2.36
BRF1-219ENST00000551787 ABCC8Q09428 1581 aa29.73■■■□□ 2.35
BRF1-219ENST00000551787 DNMBPQ6XZF7 1577 aa29.7■■■□□ 2.35
BRF1-219ENST00000551787 IFT140Q96RY7 1462 aa29.65■■■□□ 2.34
BRF1-219ENST00000551787 ZNF608Q9ULD9 1512 aaPredicted RBP29.63■■■□□ 2.33
BRF1-219ENST00000551787 POLA1P09884 1462 aaPredicted RBP29.55■■■□□ 2.32
BRF1-219ENST00000551787 CUX1P39880 1505 aa29.52■■■□□ 2.32
BRF1-219ENST00000551787 RAD54L2Q9Y4B4 1467 aa29.51■■■□□ 2.31
BRF1-219ENST00000551787 SOGA1O94964 1423 aa29.49■■■□□ 2.31
BRF1-219ENST00000551787 AQRO60306 1485 aaKnown RBP eCLIP29.47■■■□□ 2.314e-7■■■■■ 29.9
BRF1-219ENST00000551787 FGD5Q6ZNL6 1462 aa29.46■■■□□ 2.31
BRF1-219ENST00000551787 TARBP1Q13395 1621 aaKnown RBP29.45■■■□□ 2.3
BRF1-219ENST00000551787 OSCARQ8IYS5 282 aa29.41■■■□□ 2.3
BRF1-219ENST00000551787 TDRD9Q8NDG6 1382 aaKnown RBP29.4■■■□□ 2.3
BRF1-219ENST00000551787 EIF4G3O43432 1585 aaKnown RBP29.38■■■□□ 2.29
BRF1-219ENST00000551787 WRNQ14191 1432 aaPredicted RBP eCLIP29.27■■■□□ 2.28
BRF1-219ENST00000551787 FBLN2P98095 1184 aa29.26■■■□□ 2.27
BRF1-219ENST00000551787 SYNJ1O43426 1573 aa29.18■■■□□ 2.26
BRF1-219ENST00000551787 TOP2BQ02880 1626 aa29.13■■■□□ 2.25
BRF1-219ENST00000551787 SNAPC4Q5SXM2 1469 aa29.11■■■□□ 2.25
BRF1-219ENST00000551787 ABCA10Q8WWZ4 1543 aa29.11■■■□□ 2.25
BRF1-219ENST00000551787 GRIN2BQ13224 1484 aa29.1■■■□□ 2.25
BRF1-219ENST00000551787 GAPVD1Q14C86 1478 aa29.1■■■□□ 2.25
BRF1-219ENST00000551787 BIVM-ERCC5R4GMW8 1640 aa29.09■■■□□ 2.25
BRF1-219ENST00000551787 TRIM41Q8WV44 630 aa29.08■■■□□ 2.25
BRF1-219ENST00000551787 WDR97A6NE52 1622 aa29.07■■■□□ 2.24
BRF1-219ENST00000551787 CHMP7Q8WUX9 453 aaPredicted RBP29.07■■■□□ 2.24
BRF1-219ENST00000551787 CHD1O14646 1710 aa29.03■■■□□ 2.24
BRF1-219ENST00000551787 MAGI1Q96QZ7 1491 aaPredicted RBP28.99■■■□□ 2.23
BRF1-219ENST00000551787 ABCA5Q8WWZ7 1642 aa28.97■■■□□ 2.23
BRF1-219ENST00000551787 PBRM1Q86U86 1689 aa28.93■■■□□ 2.22
BRF1-219ENST00000551787 SYNJ2O15056 1496 aa28.92■■■□□ 2.22
BRF1-219ENST00000551787 RIMBP3CA6NJZ7 1639 aa28.83■■■□□ 2.21
BRF1-219ENST00000551787 RIMBP3BA6NNM3 1639 aa28.83■■■□□ 2.21
BRF1-219ENST00000551787 RIMBP3Q9UFD9 1639 aa28.83■■■□□ 2.21
BRF1-219ENST00000551787 ARHGEF11O15085 1522 aa28.83■■■□□ 2.21
BRF1-219ENST00000551787 CYB5RLQ6IPT4 315 aa28.76■■■□□ 2.19
BRF1-219ENST00000551787 FHAD1B1AJZ9 1412 aa28.73■■■□□ 2.19
BRF1-219ENST00000551787 ERICH3Q5RHP9 1530 aa28.73■■■□□ 2.19
BRF1-219ENST00000551787 CLASP1Q7Z460 1538 aa28.73■■■□□ 2.19
BRF1-219ENST00000551787 ADAMTS12P58397 1594 aa28.72■■■□□ 2.19
BRF1-219ENST00000551787 GRIN2AQ12879 1464 aa28.72■■■□□ 2.19
BRF1-219ENST00000551787 KIF27Q86VH2 1401 aa28.67■■■□□ 2.18
BRF1-219ENST00000551787 IGF1RP08069 1367 aa28.64■■■□□ 2.18
BRF1-219ENST00000551787 ARAP1Q96P48 1450 aa28.6■■■□□ 2.17
BRF1-219ENST00000551787 NUP160Q12769 1436 aa28.59■■■□□ 2.17
BRF1-219ENST00000551787 CEP170Q5SW79 1584 aa28.58■■■□□ 2.17
BRF1-219ENST00000551787 CARMIL1Q5VZK9 1371 aa28.45■■■□□ 2.14
BRF1-219ENST00000551787 RUSC2Q8N2Y8 1516 aa28.44■■■□□ 2.14
BRF1-219ENST00000551787 JPH4Q96JJ6 628 aa28.43■■■□□ 2.14
BRF1-219ENST00000551787 ERCC6L2Q5T890 1561 aa28.42■■■□□ 2.14
BRF1-219ENST00000551787 CUL7Q14999 1698 aa28.38■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms