RNA–Protein interactions for RNA: ENST00000551659.5

TMTC1-206, Transcript of transmembrane and tetratricopeptide repeat containing 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TMTC1, Length 4,228 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMTC1-206ENST00000551659 RRP7BPQ9NSQ0 103 aa22.43■■□□□ 1.18
TMTC1-206ENST00000551659 SYNJ1O43426 1573 aa22.41■■□□□ 1.18
TMTC1-206ENST00000551659 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.39■■□□□ 1.17
TMTC1-206ENST00000551659 JPH4Q96JJ6 628 aa22.38■■□□□ 1.17
TMTC1-206ENST00000551659 PLPPR3Q6T4P5 718 aa22.36■■□□□ 1.17
TMTC1-206ENST00000551659 TSPY4P0CV99 314 aa22.34■■□□□ 1.17
TMTC1-206ENST00000551659 TSPY10P0CW01 314 aa22.34■■□□□ 1.17
TMTC1-206ENST00000551659 FHOD3Q2V2M9 1422 aa22.34■■□□□ 1.17
TMTC1-206ENST00000551659 GAPVD1Q14C86 1478 aa22.33■■□□□ 1.17
TMTC1-206ENST00000551659 CFDP1Q9UEE9 299 aaPredicted RBP22.33■■□□□ 1.16
TMTC1-206ENST00000551659 CUX1P39880 1505 aa22.31■■□□□ 1.16
TMTC1-206ENST00000551659 ERICH6Q7L0X2 663 aa22.3■■□□□ 1.16
TMTC1-206ENST00000551659 VPS8Q8N3P4 1428 aa22.29■■□□□ 1.16
TMTC1-206ENST00000551659 PEG3Q9GZU2 1588 aa22.27■■□□□ 1.16
TMTC1-206ENST00000551659 TOPBP1Q92547 1522 aa22.26■■□□□ 1.15
TMTC1-206ENST00000551659 FHAD1B1AJZ9 1412 aa22.24■■□□□ 1.15
TMTC1-206ENST00000551659 POLA1P09884 1462 aaPredicted RBP22.23■■□□□ 1.15
TMTC1-206ENST00000551659 MYT1Q01538 1121 aa22.2■■□□□ 1.14
TMTC1-206ENST00000551659 NEFLP07196 543 aa22.19■■□□□ 1.14
TMTC1-206ENST00000551659 SLC4A1APQ9BWU0 796 aaKnown RBP22.18■■□□□ 1.14
TMTC1-206ENST00000551659 CHGAP10645 457 aaKnown RBP22.17■■□□□ 1.14
TMTC1-206ENST00000551659 CARMIL2Q6F5E8 1435 aa22.16■■□□□ 1.14
TMTC1-206ENST00000551659 SENP3Q9H4L4 574 aaPredicted RBP22.16■■□□□ 1.14
TMTC1-206ENST00000551659 SCAF1Q9H7N4 1312 aaKnown RBP22.15■■□□□ 1.14
TMTC1-206ENST00000551659 MRC2Q9UBG0 1479 aa22.15■■□□□ 1.14
TMTC1-206ENST00000551659 ACIN1Q9UKV3 1341 aaKnown RBP22.14■■□□□ 1.14
TMTC1-206ENST00000551659 CYB5RLQ6IPT4 315 aa22.1■■□□□ 1.13
TMTC1-206ENST00000551659 TOP2BQ02880 1626 aa22.1■■□□□ 1.13
TMTC1-206ENST00000551659 CCNB3Q8WWL7 1395 aa22.08■■□□□ 1.13
TMTC1-206ENST00000551659 OSCARQ8IYS5 282 aa22.08■■□□□ 1.12
TMTC1-206ENST00000551659 FMN1Q68DA7 1419 aa22.07■■□□□ 1.12
TMTC1-206ENST00000551659 BCANQ96GW7 911 aa22.06■■□□□ 1.12
TMTC1-206ENST00000551659 HIRIP3Q9BW71 556 aaPredicted RBP22.06■■□□□ 1.12
TMTC1-206ENST00000551659 ESF1Q9H501 851 aaKnown RBP22.06■■□□□ 1.12
TMTC1-206ENST00000551659 KDM2AQ9Y2K7 1162 aa22.05■■□□□ 1.12
TMTC1-206ENST00000551659 LAMC3Q9Y6N6 1575 aa22.03■■□□□ 1.12
TMTC1-206ENST00000551659 TRHP20396 242 aaPredicted RBP22.03■■□□□ 1.12
TMTC1-206ENST00000551659 TONSLQ96HA7 1378 aa22.02■■□□□ 1.12
TMTC1-206ENST00000551659 URB2Q14146 1524 aaKnown RBP22.01■■□□□ 1.11
TMTC1-206ENST00000551659 GRIN2BQ13224 1484 aa22■■□□□ 1.11
TMTC1-206ENST00000551659 ZNF316A6NFI3 1004 aaPredicted RBP22■■□□□ 1.11
TMTC1-206ENST00000551659 SIN3AQ96ST3 1273 aa21.99■■□□□ 1.11
TMTC1-206ENST00000551659 DNMBPQ6XZF7 1577 aa21.98■■□□□ 1.11
TMTC1-206ENST00000551659 PTPRGP23470 1445 aa21.97■■□□□ 1.11
TMTC1-206ENST00000551659 RGL3Q3MIN7 710 aa21.96■■□□□ 1.11
TMTC1-206ENST00000551659 PRXQ9BXM0 1461 aa21.95■■□□□ 1.1
TMTC1-206ENST00000551659 STAG3Q9UJ98 1225 aa21.94■■□□□ 1.1
TMTC1-206ENST00000551659 IFT140Q96RY7 1462 aa21.94■■□□□ 1.1
TMTC1-206ENST00000551659 ZNF608Q9ULD9 1512 aaPredicted RBP21.93■■□□□ 1.1
TMTC1-206ENST00000551659 HNRNPMP52272 730 aaKnown RBP eCLIP21.91■■□□□ 1.1
TMTC1-206ENST00000551659 SNAPC4Q5SXM2 1469 aa21.9■■□□□ 1.1
TMTC1-206ENST00000551659 ARHGAP35Q9NRY4 1499 aa21.89■■□□□ 1.09
TMTC1-206ENST00000551659 FOXD1Q16676 465 aa21.89■■□□□ 1.09
TMTC1-206ENST00000551659 ARAP1Q96P48 1450 aa21.87■■□□□ 1.09
TMTC1-206ENST00000551659 ARID4BQ4LE39 1312 aaPredicted RBP21.87■■□□□ 1.09
TMTC1-206ENST00000551659 MLECQ14165 292 aa21.84■■□□□ 1.09
TMTC1-206ENST00000551659 ABCA10Q8WWZ4 1543 aa21.84■■□□□ 1.09
TMTC1-206ENST00000551659 KIF21BO75037 1637 aa21.84■■□□□ 1.09
TMTC1-206ENST00000551659 DDX10Q13206 875 aaKnown RBP21.81■■□□□ 1.08
TMTC1-206ENST00000551659 ZNF644Q9H582 1327 aaPredicted RBP21.79■■□□□ 1.08
TMTC1-206ENST00000551659 EFCAB2Q5VUJ9 269 aa21.79■■□□□ 1.08
TMTC1-206ENST00000551659 GGT6Q6P531 493 aa21.77■■□□□ 1.08
TMTC1-206ENST00000551659 PRG4Q92954 1404 aaPredicted RBP21.76■■□□□ 1.07
TMTC1-206ENST00000551659 ERICH3Q5RHP9 1530 aa21.72■■□□□ 1.07
TMTC1-206ENST00000551659 MIER1Q8N108 512 aa21.71■■□□□ 1.07
TMTC1-206ENST00000551659 RAB3GAP2Q9H2M9 1393 aa21.71■■□□□ 1.07
TMTC1-206ENST00000551659 ANP32CO43423 234 aa21.7■■□□□ 1.06
TMTC1-206ENST00000551659 SETD5Q9C0A6 1442 aa21.68■■□□□ 1.06
TMTC1-206ENST00000551659 CCDC18Q5T9S5 1454 aa21.66■■□□□ 1.06
TMTC1-206ENST00000551659 PHLDB1Q86UU1 1377 aa21.66■■□□□ 1.06
TMTC1-206ENST00000551659 PKD2Q13563 968 aa21.65■■□□□ 1.06
TMTC1-206ENST00000551659 PRDM2Q13029 1718 aa21.62■■□□□ 1.05
TMTC1-206ENST00000551659 KIF3BO15066 747 aa21.61■■□□□ 1.05
TMTC1-206ENST00000551659 BIVM-ERCC5R4GMW8 1640 aa21.6■■□□□ 1.05
TMTC1-206ENST00000551659 MPHOSPH9Q99550 1183 aa21.59■■□□□ 1.05
TMTC1-206ENST00000551659 NUP155O75694 1391 aa21.58■■□□□ 1.04
TMTC1-206ENST00000551659 SPAG9O60271 1321 aaKnown RBP21.58■■□□□ 1.04
TMTC1-206ENST00000551659 FAM69CQ0P6D2 419 aa21.57■■□□□ 1.04
TMTC1-206ENST00000551659 CASKIN1Q8WXD9 1431 aa21.56■■□□□ 1.04
TMTC1-206ENST00000551659 DCAF11Q8TEB1 546 aa21.55■■□□□ 1.04
TMTC1-206ENST00000551659 KIF21AQ7Z4S6 1674 aa21.55■■□□□ 1.04
TMTC1-206ENST00000551659 KIAA0586Q9BVV6 1533 aa21.55■■□□□ 1.04
TMTC1-206ENST00000551659 LRRC9Q6ZRR7 1453 aa21.54■■□□□ 1.04
TMTC1-206ENST00000551659 GRIN2AQ12879 1464 aa21.54■■□□□ 1.04
TMTC1-206ENST00000551659 SYNJ2O15056 1496 aa21.54■■□□□ 1.04
TMTC1-206ENST00000551659 EIF4G2P78344 907 aaKnown RBP eCLIP21.53■■□□□ 1.04
TMTC1-206ENST00000551659 PPP1R15AO75807 674 aaPredicted RBP21.52■■□□□ 1.04
TMTC1-206ENST00000551659 ANKRD30AQ9BXX3 1397 aa21.52■■□□□ 1.03
TMTC1-206ENST00000551659 AFAP1Q8N556 730 aa21.51■■□□□ 1.03
TMTC1-206ENST00000551659 PLB1Q6P1J6 1458 aa21.47■■□□□ 1.03
TMTC1-206ENST00000551659 CARD11Q9BXL7 1154 aa21.47■■□□□ 1.03
TMTC1-206ENST00000551659 FGD6Q6ZV73 1430 aa21.45■■□□□ 1.02
TMTC1-206ENST00000551659 NCOA2Q15596 1464 aa21.45■■□□□ 1.02
TMTC1-206ENST00000551659 MAGI1Q96QZ7 1491 aaPredicted RBP21.45■■□□□ 1.02
TMTC1-206ENST00000551659 CDK13Q14004 1512 aaKnown RBP21.43■■□□□ 1.02
TMTC1-206ENST00000551659 IQGAP2Q13576 1575 aa21.43■■□□□ 1.02
TMTC1-206ENST00000551659 PLEKHG5O94827 1062 aa21.43■■□□□ 1.02
TMTC1-206ENST00000551659 MYOM3Q5VTT5 1437 aa21.42■■□□□ 1.02
TMTC1-206ENST00000551659 SENP3-EIF4A1A0A087X0R7 540 aa21.42■■□□□ 1.02
TMTC1-206ENST00000551659 RSPH4AQ5TD94 716 aa21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms