RNA–Protein interactions for RNA: ENST00000551659.5

TMTC1-206, Transcript of transmembrane and tetratricopeptide repeat containing 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TMTC1, Length 4,228 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMTC1-206ENST00000551659 NISCHQ9Y2I1 1504 aa30.77■■■□□ 2.52
TMTC1-206ENST00000551659 DCAF8L2P0C7V8 631 aa29.28■■■□□ 2.28
TMTC1-206ENST00000551659 SHROOM4Q9ULL8 1493 aa27.81■■■□□ 2.04
TMTC1-206ENST00000551659 SUPT5HO00267 1087 aaKnown RBP27.4■■□□□ 1.98
TMTC1-206ENST00000551659 ABCC9O60706 1549 aa26.58■■□□□ 1.85
TMTC1-206ENST00000551659 EHMT2Q96KQ7 1210 aa26.08■■□□□ 1.77
TMTC1-206ENST00000551659 PABPN1Q86U42 306 aaKnown RBP eCLIP25.94■■□□□ 1.74
TMTC1-206ENST00000551659 FAM9AQ8IZU1 332 aaPredicted RBP25.69■■□□□ 1.7
TMTC1-206ENST00000551659 CCDC180Q9P1Z9 1646 aa25.67■■□□□ 1.7
TMTC1-206ENST00000551659 ZCCHC6Q5VYS8 1495 aaKnown RBP25.53■■□□□ 1.68
TMTC1-206ENST00000551659 TRIM41Q8WV44 630 aa25.33■■□□□ 1.65
TMTC1-206ENST00000551659 SCRIBQ14160 1630 aa25.23■■□□□ 1.63
TMTC1-206ENST00000551659 RANGAP1P46060 587 aaPredicted RBP25.11■■□□□ 1.61
TMTC1-206ENST00000551659 CHIC1Q5VXU3 224 aa24.93■■□□□ 1.58
TMTC1-206ENST00000551659 TTBK1Q5TCY1 1321 aaPredicted RBP24.92■■□□□ 1.58
TMTC1-206ENST00000551659 RB1CC1Q8TDY2 1594 aa24.79■■□□□ 1.56
TMTC1-206ENST00000551659 UBTFP17480 764 aaKnown RBP24.75■■□□□ 1.55
TMTC1-206ENST00000551659 LOC105371045A0A1W2PR82 267 aa24.73■■□□□ 1.55
TMTC1-206ENST00000551659 NACADO15069 1562 aa24.69■■□□□ 1.54
TMTC1-206ENST00000551659 PCGF6Q9BYE7 350 aa24.61■■□□□ 1.53
TMTC1-206ENST00000551659 APLP2Q06481 763 aa24.56■■□□□ 1.52
TMTC1-206ENST00000551659 PPARGC1BQ86YN6 1023 aaKnown RBP24.51■■□□□ 1.51
TMTC1-206ENST00000551659 ATP1B4Q9UN42 357 aaPredicted RBP24.51■■□□□ 1.51
TMTC1-206ENST00000551659 DCAF1Q9Y4B6 1507 aa24.49■■□□□ 1.51
TMTC1-206ENST00000551659 CECR2Q9BXF3 1484 aa24.39■■□□□ 1.5
TMTC1-206ENST00000551659 RSF1Q96T23 1441 aaPredicted RBP24.36■■□□□ 1.49
TMTC1-206ENST00000551659 MYO15BQ96JP2 1530 aa23.99■■□□□ 1.43
TMTC1-206ENST00000551659 MROH2BQ7Z745 1585 aa23.98■■□□□ 1.43
TMTC1-206ENST00000551659 FBLN2P98095 1184 aa23.94■■□□□ 1.42
TMTC1-206ENST00000551659 BAZ1AQ9NRL2 1556 aaPredicted RBP23.9■■□□□ 1.42
TMTC1-206ENST00000551659 BAZ1BQ9UIG0 1483 aaKnown RBP23.89■■□□□ 1.42
TMTC1-206ENST00000551659 HRCP23327 699 aa23.88■■□□□ 1.41
TMTC1-206ENST00000551659 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.87■■□□□ 1.41
TMTC1-206ENST00000551659 HNRNPUL2Q1KMD3 747 aaKnown RBP23.87■■□□□ 1.41
TMTC1-206ENST00000551659 CSRNP3Q8WYN3 585 aa23.85■■□□□ 1.41
TMTC1-206ENST00000551659 ITGAEP38570 1179 aa23.77■■□□□ 1.4
TMTC1-206ENST00000551659 P3H3Q8IVL6 736 aa23.74■■□□□ 1.39
TMTC1-206ENST00000551659 CCER1Q8TC90 406 aaPredicted RBP23.65■■□□□ 1.38
TMTC1-206ENST00000551659 WIZO95785 1651 aa23.64■■□□□ 1.37
TMTC1-206ENST00000551659 ARID3CA6NKF2 412 aa23.6■■□□□ 1.37
TMTC1-206ENST00000551659 TRIM26Q12899 539 aaPredicted RBP23.59■■□□□ 1.37
TMTC1-206ENST00000551659 CCDC88BA6NC98 1476 aa23.56■■□□□ 1.36
TMTC1-206ENST00000551659 WRNQ14191 1432 aaPredicted RBP eCLIP23.47■■□□□ 1.35
TMTC1-206ENST00000551659 ATAD2BQ9ULI0 1458 aa23.47■■□□□ 1.35
TMTC1-206ENST00000551659 SMARCA4P51532 1647 aa23.4■■□□□ 1.34
TMTC1-206ENST00000551659 SMARCA2P51531 1590 aa23.38■■□□□ 1.33
TMTC1-206ENST00000551659 MYT1LQ9UL68 1186 aa23.32■■□□□ 1.32
TMTC1-206ENST00000551659 ABCC8Q09428 1581 aa23.31■■□□□ 1.32
TMTC1-206ENST00000551659 FAM50AQ14320 339 aaKnown RBP23.29■■□□□ 1.32
TMTC1-206ENST00000551659 YTHDC1Q96MU7 727 aaKnown RBP23.26■■□□□ 1.31
TMTC1-206ENST00000551659 TOP2AP11388 1531 aaKnown RBP23.25■■□□□ 1.31
TMTC1-206ENST00000551659 ERCC6Q03468 1493 aa23.24■■□□□ 1.31
TMTC1-206ENST00000551659 SOGA1O94964 1423 aa23.23■■□□□ 1.31
TMTC1-206ENST00000551659 DNAJC5BQ9UF47 199 aa23.23■■□□□ 1.31
TMTC1-206ENST00000551659 CHMP7Q8WUX9 453 aaPredicted RBP23.22■■□□□ 1.31
TMTC1-206ENST00000551659 ZEB1P37275 1124 aaPredicted RBP23.21■■□□□ 1.31
TMTC1-206ENST00000551659 EIF4G1Q04637 1599 aaKnown RBP23.18■■□□□ 1.3
TMTC1-206ENST00000551659 CADPSQ9ULU8 1353 aa23.16■■□□□ 1.3
TMTC1-206ENST00000551659 BICRAQ9NZM4 1560 aa23.15■■□□□ 1.3
TMTC1-206ENST00000551659 CENPBP07199 599 aaPredicted RBP23.14■■□□□ 1.29
TMTC1-206ENST00000551659 KIF27Q86VH2 1401 aa23.06■■□□□ 1.28
TMTC1-206ENST00000551659 TDRD9Q8NDG6 1382 aaKnown RBP23.04■■□□□ 1.28
TMTC1-206ENST00000551659 PELP1Q8IZL8 1130 aaKnown RBP23.03■■□□□ 1.28
TMTC1-206ENST00000551659 CUX2O14529 1486 aa23.02■■□□□ 1.28
TMTC1-206ENST00000551659 PDS5BQ9NTI5 1447 aa23■■□□□ 1.27
TMTC1-206ENST00000551659 NCAPD3P42695 1498 aa22.99■■□□□ 1.27
TMTC1-206ENST00000551659 ZNF777Q9ULD5 760 aaPredicted RBP22.97■■□□□ 1.27
TMTC1-206ENST00000551659 CLIP1P30622 1438 aa22.97■■□□□ 1.27
TMTC1-206ENST00000551659 EEA1Q15075 1411 aa22.92■■□□□ 1.26
TMTC1-206ENST00000551659 CEP162Q5TB80 1403 aa22.9■■□□□ 1.26
TMTC1-206ENST00000551659 GOLGA3Q08378 1498 aa22.89■■□□□ 1.25
TMTC1-206ENST00000551659 CC2D2AQ9P2K1 1620 aa22.88■■□□□ 1.25
TMTC1-206ENST00000551659 CARMIL1Q5VZK9 1371 aa22.87■■□□□ 1.25
TMTC1-206ENST00000551659 TRIM52Q96A61 297 aa22.87■■□□□ 1.25
TMTC1-206ENST00000551659 RUSC2Q8N2Y8 1516 aa22.87■■□□□ 1.25
TMTC1-206ENST00000551659 UNC13AQ9UPW8 1703 aa22.86■■□□□ 1.25
TMTC1-206ENST00000551659 FANCD2Q9BXW9 1451 aa22.85■■□□□ 1.25
TMTC1-206ENST00000551659 NESP48681 1621 aa22.84■■□□□ 1.25
TMTC1-206ENST00000551659 CEP164Q9UPV0 1460 aa22.8■■□□□ 1.24
TMTC1-206ENST00000551659 NEUROD1Q13562 356 aa22.78■■□□□ 1.24
TMTC1-206ENST00000551659 TNIKQ9UKE5 1360 aa22.78■■□□□ 1.24
TMTC1-206ENST00000551659 CDK11AQ9UQ88 783 aaPredicted RBP22.78■■□□□ 1.24
TMTC1-206ENST00000551659 CHIC2Q9UKJ5 165 aa22.72■■□□□ 1.23
TMTC1-206ENST00000551659 KCNH8Q96L42 1107 aa22.7■■□□□ 1.22
TMTC1-206ENST00000551659 NPM1P06748 294 aaKnown RBP eCLIP22.67■■□□□ 1.22
TMTC1-206ENST00000551659 POLR3GLQ9BT43 218 aa22.66■■□□□ 1.22
TMTC1-206ENST00000551659 MTUS2Q5JR59 1369 aa22.66■■□□□ 1.22
TMTC1-206ENST00000551659 RAD54L2Q9Y4B4 1467 aa22.64■■□□□ 1.22
TMTC1-206ENST00000551659 CNGB1Q14028 1251 aaPredicted RBP22.64■■□□□ 1.21
TMTC1-206ENST00000551659 CFTRP13569 1480 aa22.58■■□□□ 1.21
TMTC1-206ENST00000551659 RAPGEF2Q9Y4G8 1499 aa22.57■■□□□ 1.2
TMTC1-206ENST00000551659 FGD5Q6ZNL6 1462 aa22.56■■□□□ 1.2
TMTC1-206ENST00000551659 DIEXFQ68CQ4 756 aaKnown RBP22.52■■□□□ 1.2
TMTC1-206ENST00000551659 ZNF326Q5BKZ1 582 aaKnown RBP22.52■■□□□ 1.2
TMTC1-206ENST00000551659 HMGXB3Q12766 1538 aa22.52■■□□□ 1.19
TMTC1-206ENST00000551659 PLEKHD1A6NEE1 506 aa22.49■■□□□ 1.19
TMTC1-206ENST00000551659 GTF3C3Q9Y5Q9 886 aa22.48■■□□□ 1.19
TMTC1-206ENST00000551659 KANK4Q5T7N3 995 aaPredicted RBP22.47■■□□□ 1.19
TMTC1-206ENST00000551659 AQRO60306 1485 aaKnown RBP eCLIP22.46■■□□□ 1.19
TMTC1-206ENST00000551659 IGF1RP08069 1367 aa22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 135.1 ms