RNA–Protein interactions for RNA: ENST00000551301.1

SLC48A1-208, Transcript of solute carrier family 48 member 1, humanhuman

TSL 2

Gene SLC48A1, Length 1,070 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-208ENST00000551301 PRG4Q92954 1404 aaPredicted RBP34.91■■■■□ 3.18
SLC48A1-208ENST00000551301 RUSC2Q8N2Y8 1516 aa34.86■■■■□ 3.17
SLC48A1-208ENST00000551301 CARMIL1Q5VZK9 1371 aa34.8■■■■□ 3.16
SLC48A1-208ENST00000551301 KIAA0586Q9BVV6 1533 aa34.79■■■■□ 3.16
SLC48A1-208ENST00000551301 NPM1P06748 294 aaKnown RBP eCLIP34.6■■■■□ 3.13
SLC48A1-208ENST00000551301 CARMIL2Q6F5E8 1435 aa34.53■■■■□ 3.12
SLC48A1-208ENST00000551301 RAPGEF2Q9Y4G8 1499 aa34.52■■■■□ 3.12
SLC48A1-208ENST00000551301 IQGAP2Q13576 1575 aa34.5■■■■□ 3.11
SLC48A1-208ENST00000551301 PTPRGP23470 1445 aa34.45■■■■□ 3.11
SLC48A1-208ENST00000551301 TNIKQ9UKE5 1360 aa34.4■■■■□ 3.1
SLC48A1-208ENST00000551301 TTBK1Q5TCY1 1321 aaPredicted RBP34.39■■■■□ 3.1
SLC48A1-208ENST00000551301 ADCY10Q96PN6 1610 aa34.39■■■■□ 3.1
SLC48A1-208ENST00000551301 MAPKBP1O60336 1514 aa34.34■■■■□ 3.09
SLC48A1-208ENST00000551301 FAM69CQ0P6D2 419 aa34.29■■■■□ 3.08
SLC48A1-208ENST00000551301 KIF13AQ9H1H9 1805 aa34.28■■■■□ 3.08
SLC48A1-208ENST00000551301 ABCC10Q5T3U5 1492 aa34.27■■■■□ 3.08
SLC48A1-208ENST00000551301 UGGT2Q9NYU1 1516 aa34.26■■■■□ 3.08
SLC48A1-208ENST00000551301 DISP1Q96F81 1524 aa34.24■■■■□ 3.07
SLC48A1-208ENST00000551301 CTTNBP2Q8WZ74 1663 aa34.19■■■■□ 3.06
SLC48A1-208ENST00000551301 PRXQ9BXM0 1461 aa34.19■■■■□ 3.06
SLC48A1-208ENST00000551301 ABCC2Q92887 1545 aa34.18■■■■□ 3.06
SLC48A1-208ENST00000551301 UACAQ9BZF9 1416 aa34.17■■■■□ 3.06
SLC48A1-208ENST00000551301 DIP2BQ9P265 1576 aa34.15■■■■□ 3.06
SLC48A1-208ENST00000551301 UHRF1BP1LA0JNW5 1464 aa34.14■■■■□ 3.06
SLC48A1-208ENST00000551301 KIAA0556O60303 1618 aa34.14■■■■□ 3.06
SLC48A1-208ENST00000551301 GOLGA3Q08378 1498 aa34.14■■■■□ 3.06
SLC48A1-208ENST00000551301 CSRNP3Q8WYN3 585 aa34.11■■■■□ 3.05
SLC48A1-208ENST00000551301 PLB1Q6P1J6 1458 aa34.06■■■■□ 3.04
SLC48A1-208ENST00000551301 EEA1Q15075 1411 aa34.05■■■■□ 3.04
SLC48A1-208ENST00000551301 FAM9AQ8IZU1 332 aaPredicted RBP34.05■■■■□ 3.04
SLC48A1-208ENST00000551301 ASXL2Q76L83 1435 aa34.02■■■■□ 3.04
SLC48A1-208ENST00000551301 KDM5BQ9UGL1 1544 aa33.97■■■■□ 3.03
SLC48A1-208ENST00000551301 TSPOAP1O95153 1857 aa33.93■■■■□ 3.02
SLC48A1-208ENST00000551301 AEBP2Q6ZN18 517 aaPredicted RBP33.92■■■■□ 3.02
SLC48A1-208ENST00000551301 ZCCHC11Q5TAX3 1644 aaKnown RBP33.89■■■■□ 3.02
SLC48A1-208ENST00000551301 GLI2P10070 1586 aa33.87■■■■□ 3.01
SLC48A1-208ENST00000551301 KDM6BO15054 1643 aa33.83■■■■□ 3.01
SLC48A1-208ENST00000551301 EPRSP07814 1512 aaKnown RBP33.8■■■■□ 3
SLC48A1-208ENST00000551301 ABCA8O94911 1581 aa33.8■■■■□ 3
SLC48A1-208ENST00000551301 P3H3Q8IVL6 736 aa33.79■■■■□ 3
SLC48A1-208ENST00000551301 WDR7Q9Y4E6 1490 aa33.76■■■□□ 2.99
SLC48A1-208ENST00000551301 CHIC1Q5VXU3 224 aa33.69■■■□□ 2.98
SLC48A1-208ENST00000551301 TEX14Q8IWB6 1497 aa33.69■■■□□ 2.98
SLC48A1-208ENST00000551301 SAMD9Q5K651 1589 aa33.68■■■□□ 2.98
SLC48A1-208ENST00000551301 RANGAP1P46060 587 aaPredicted RBP33.67■■■□□ 2.98
SLC48A1-208ENST00000551301 MAP3K4Q9Y6R4 1608 aa33.67■■■□□ 2.98
SLC48A1-208ENST00000551301 KIF21BO75037 1637 aa33.66■■■□□ 2.98
SLC48A1-208ENST00000551301 KCNH8Q96L42 1107 aa33.65■■■□□ 2.98
SLC48A1-208ENST00000551301 PPRC1Q5VV67 1664 aaKnown RBP33.64■■■□□ 2.98
SLC48A1-208ENST00000551301 ARID3CA6NKF2 412 aa33.58■■■□□ 2.97
SLC48A1-208ENST00000551301 CD109Q6YHK3 1445 aa33.54■■■□□ 2.96
SLC48A1-208ENST00000551301 RAPGEF6Q8TEU7 1601 aa33.53■■■□□ 2.96
SLC48A1-208ENST00000551301 ATP10BO94823 1461 aa33.53■■■□□ 2.96
SLC48A1-208ENST00000551301 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.53■■■□□ 2.96
SLC48A1-208ENST00000551301 UBTFP17480 764 aaKnown RBP33.53■■■□□ 2.96
SLC48A1-208ENST00000551301 HNRNPUL2Q1KMD3 747 aaKnown RBP33.53■■■□□ 2.96
SLC48A1-208ENST00000551301 CFAP43Q8NDM7 1665 aa33.52■■■□□ 2.96
SLC48A1-208ENST00000551301 EFCAB5A4FU69 1503 aa33.51■■■□□ 2.95
SLC48A1-208ENST00000551301 FHOD3Q2V2M9 1422 aa33.5■■■□□ 2.95
SLC48A1-208ENST00000551301 MAGI3Q5TCQ9 1506 aa33.47■■■□□ 2.95
SLC48A1-208ENST00000551301 EHMT2Q96KQ7 1210 aa33.45■■■□□ 2.95
SLC48A1-208ENST00000551301 COL17A1Q9UMD9 1497 aaPredicted RBP33.4■■■□□ 2.94
SLC48A1-208ENST00000551301 NUP153P49790 1475 aaKnown RBP33.38■■■□□ 2.93
SLC48A1-208ENST00000551301 PLEKHD1A6NEE1 506 aa33.33■■■□□ 2.93
SLC48A1-208ENST00000551301 ABCA9Q8IUA7 1624 aa33.31■■■□□ 2.92
SLC48A1-208ENST00000551301 KDM4FA0A1W2PPD8 638 aa33.28■■■□□ 2.92
SLC48A1-208ENST00000551301 PHLDB1Q86UU1 1377 aa33.27■■■□□ 2.92
SLC48A1-208ENST00000551301 FMN1Q68DA7 1419 aa33.25■■■□□ 2.91
SLC48A1-208ENST00000551301 ARAP3Q8WWN8 1544 aa33.2■■■□□ 2.91
SLC48A1-208ENST00000551301 ATP1B4Q9UN42 357 aaPredicted RBP33.2■■■□□ 2.91
SLC48A1-208ENST00000551301 ARHGAP35Q9NRY4 1499 aa33.17■■■□□ 2.9
SLC48A1-208ENST00000551301 NEO1Q92859 1461 aa33.16■■■□□ 2.9
SLC48A1-208ENST00000551301 ADGRL1O94910 1474 aa33.14■■■□□ 2.9
SLC48A1-208ENST00000551301 HECW1Q76N89 1606 aa33.11■■■□□ 2.89
SLC48A1-208ENST00000551301 CDK11AQ9UQ88 783 aaPredicted RBP33.11■■■□□ 2.89
SLC48A1-208ENST00000551301 CDK13Q14004 1512 aaKnown RBP33.08■■■□□ 2.89
SLC48A1-208ENST00000551301 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP33.02■■■□□ 2.886e-9■■■□□ 15.3
SLC48A1-208ENST00000551301 RAPGEF3O95398 923 aa33.01■■■□□ 2.87
SLC48A1-208ENST00000551301 CFAP74Q9C0B2 1584 aa33■■■□□ 2.87
SLC48A1-208ENST00000551301 FANCAO15360 1455 aa32.99■■■□□ 2.87
SLC48A1-208ENST00000551301 TTC37Q6PGP7 1564 aa32.96■■■□□ 2.87
SLC48A1-208ENST00000551301 AKNAQ7Z591 1439 aa32.95■■■□□ 2.87
SLC48A1-208ENST00000551301 DENND4BO75064 1496 aaPredicted RBP32.93■■■□□ 2.86
SLC48A1-208ENST00000551301 CLIP1P30622 1438 aa32.91■■■□□ 2.86
SLC48A1-208ENST00000551301 PLCH2O75038 1416 aa32.87■■■□□ 2.85
SLC48A1-208ENST00000551301 TROQ12816 1431 aaPredicted RBP32.86■■■□□ 2.85
SLC48A1-208ENST00000551301 CASKIN1Q8WXD9 1431 aa32.86■■■□□ 2.85
SLC48A1-208ENST00000551301 KIF14Q15058 1648 aa32.84■■■□□ 2.85
SLC48A1-208ENST00000551301 CCDC18Q5T9S5 1454 aa32.84■■■□□ 2.85
SLC48A1-208ENST00000551301 FRMPD1Q5SYB0 1578 aa32.83■■■□□ 2.85
SLC48A1-208ENST00000551301 EFCAB2Q5VUJ9 269 aa32.83■■■□□ 2.85
SLC48A1-208ENST00000551301 ARID4BQ4LE39 1312 aaPredicted RBP32.81■■■□□ 2.84
SLC48A1-208ENST00000551301 MYO5CQ9NQX4 1742 aa32.8■■■□□ 2.84
SLC48A1-208ENST00000551301 RICTORQ6R327 1708 aa32.8■■■□□ 2.84
SLC48A1-208ENST00000551301 PCF11O94913 1555 aaKnown RBP32.79■■■□□ 2.84
SLC48A1-208ENST00000551301 FYCO1Q9BQS8 1478 aa32.76■■■□□ 2.84
SLC48A1-208ENST00000551301 SCAPERQ9BY12 1400 aa32.76■■■□□ 2.83
SLC48A1-208ENST00000551301 LRRIQ1Q96JM4 1722 aa32.75■■■□□ 2.83
SLC48A1-208ENST00000551301 ARHGEF40Q8TER5 1519 aa32.73■■■□□ 2.83
SLC48A1-208ENST00000551301 MAGI2Q86UL8 1455 aa32.72■■■□□ 2.83
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms