RNA–Protein interactions for RNA: ENST00000550929.5

LETMD1-228, Transcript of LETM1 domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LETMD1, Length 1,389 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-228ENST00000550929 ABCA5Q8WWZ7 1642 aa16.01■□□□□ 0.15
LETMD1-228ENST00000550929 TOP2BQ02880 1626 aa15.98■□□□□ 0.15
LETMD1-228ENST00000550929 BIVM-ERCC5R4GMW8 1640 aa15.96■□□□□ 0.14
LETMD1-228ENST00000550929 GRIN2AQ12879 1464 aa15.93■□□□□ 0.14
LETMD1-228ENST00000550929 ADAMTS12P58397 1594 aa15.9■□□□□ 0.14
LETMD1-228ENST00000550929 FHAD1B1AJZ9 1412 aa15.9■□□□□ 0.14
LETMD1-228ENST00000550929 ERCC6L2Q5T890 1561 aa15.88■□□□□ 0.13
LETMD1-228ENST00000550929 CEP170Q5SW79 1584 aa15.87■□□□□ 0.13
LETMD1-228ENST00000550929 NUP160Q12769 1436 aa15.85■□□□□ 0.13
LETMD1-228ENST00000550929 HOXD11P31277 338 aaPredicted RBP15.85■□□□□ 0.13
LETMD1-228ENST00000550929 CNKSR2Q8WXI2 1034 aa15.85■□□□□ 0.13
LETMD1-228ENST00000550929 ERICH3Q5RHP9 1530 aa15.85■□□□□ 0.13
LETMD1-228ENST00000550929 JPH4Q96JJ6 628 aa15.79■□□□□ 0.12
LETMD1-228ENST00000550929 PRG4Q92954 1404 aaPredicted RBP15.76■□□□□ 0.11
LETMD1-228ENST00000550929 IGF1RP08069 1367 aa15.74■□□□□ 0.11
LETMD1-228ENST00000550929 SHROOM2Q13796 1616 aa15.73■□□□□ 0.11
LETMD1-228ENST00000550929 RNF216Q9NWF9 866 aaPredicted RBP15.72■□□□□ 0.11
LETMD1-228ENST00000550929 KIF27Q86VH2 1401 aa15.71■□□□□ 0.11
LETMD1-228ENST00000550929 RUSC2Q8N2Y8 1516 aa15.66■□□□□ 0.1
LETMD1-228ENST00000550929 TTBK1Q5TCY1 1321 aaPredicted RBP15.65■□□□□ 0.1
LETMD1-228ENST00000550929 CARMIL1Q5VZK9 1371 aa15.64■□□□□ 0.09
LETMD1-228ENST00000550929 DCAF8L1A6NGE4 600 aa15.63■□□□□ 0.09
LETMD1-228ENST00000550929 KIAA0586Q9BVV6 1533 aa15.62■□□□□ 0.09
LETMD1-228ENST00000550929 NPM1P06748 294 aaKnown RBP eCLIP15.62■□□□□ 0.09
LETMD1-228ENST00000550929 CUL7Q14999 1698 aa15.6■□□□□ 0.09
LETMD1-228ENST00000550929 FAM69CQ0P6D2 419 aa15.57■□□□□ 0.08
LETMD1-228ENST00000550929 PTPRGP23470 1445 aa15.52■□□□□ 0.08
LETMD1-228ENST00000550929 ADCY10Q96PN6 1610 aa15.52■□□□□ 0.07
LETMD1-228ENST00000550929 NCBP3Q53F19 620 aaKnown RBP15.51■□□□□ 0.07
LETMD1-228ENST00000550929 CARMIL2Q6F5E8 1435 aa15.49■□□□□ 0.07
LETMD1-228ENST00000550929 ABCC10Q5T3U5 1492 aa15.49■□□□□ 0.07
LETMD1-228ENST00000550929 TNIKQ9UKE5 1360 aa15.49■□□□□ 0.07
LETMD1-228ENST00000550929 KIF13AQ9H1H9 1805 aa15.48■□□□□ 0.07
LETMD1-228ENST00000550929 RAPGEF2Q9Y4G8 1499 aa15.47■□□□□ 0.07
LETMD1-228ENST00000550929 IQGAP2Q13576 1575 aa15.46■□□□□ 0.07
LETMD1-228ENST00000550929 MAPKBP1O60336 1514 aa15.45■□□□□ 0.06
LETMD1-228ENST00000550929 DIP2BQ9P265 1576 aa15.43■□□□□ 0.06
LETMD1-228ENST00000550929 DISP1Q96F81 1524 aa15.42■□□□□ 0.06
LETMD1-228ENST00000550929 CACNB1Q02641 598 aaPredicted RBP15.4■□□□□ 0.06
LETMD1-228ENST00000550929 RNF39Q9H2S5 420 aa15.4■□□□□ 0.06
LETMD1-228ENST00000550929 UACAQ9BZF9 1416 aa15.38■□□□□ 0.05
LETMD1-228ENST00000550929 ABCC2Q92887 1545 aa15.38■□□□□ 0.05
LETMD1-228ENST00000550929 ASXL2Q76L83 1435 aa15.37■□□□□ 0.05
LETMD1-228ENST00000550929 UGGT2Q9NYU1 1516 aa15.36■□□□□ 0.05
LETMD1-228ENST00000550929 TSPOAP1O95153 1857 aa15.35■□□□□ 0.05
LETMD1-228ENST00000550929 UHRF1BP1LA0JNW5 1464 aa15.33■□□□□ 0.05
LETMD1-228ENST00000550929 KIAA0556O60303 1618 aa15.32■□□□□ 0.04
LETMD1-228ENST00000550929 NPM3O75607 178 aaKnown RBP15.32■□□□□ 0.04
LETMD1-228ENST00000550929 PLB1Q6P1J6 1458 aa15.32■□□□□ 0.04
LETMD1-228ENST00000550929 P3H3Q8IVL6 736 aa15.31■□□□□ 0.04
LETMD1-228ENST00000550929 PRXQ9BXM0 1461 aa15.3■□□□□ 0.04
LETMD1-228ENST00000550929 KDM6BO15054 1643 aa15.3■□□□□ 0.04
LETMD1-228ENST00000550929 CSRNP3Q8WYN3 585 aa15.28■□□□□ 0.04
LETMD1-228ENST00000550929 KDM5BQ9UGL1 1544 aa15.28■□□□□ 0.04
LETMD1-228ENST00000550929 ARID3CA6NKF2 412 aa15.26■□□□□ 0.03
LETMD1-228ENST00000550929 FAM9AQ8IZU1 332 aaPredicted RBP15.26■□□□□ 0.03
LETMD1-228ENST00000550929 CTTNBP2Q8WZ74 1663 aa15.26■□□□□ 0.03
LETMD1-228ENST00000550929 EPRSP07814 1512 aaKnown RBP15.26■□□□□ 0.03
LETMD1-228ENST00000550929 ZCCHC11Q5TAX3 1644 aaKnown RBP15.25■□□□□ 0.03
LETMD1-228ENST00000550929 GOLGA3Q08378 1498 aa15.25■□□□□ 0.03
LETMD1-228ENST00000550929 RANGAP1P46060 587 aaPredicted RBP15.24■□□□□ 0.03
LETMD1-228ENST00000550929 KCNH8Q96L42 1107 aa15.24■□□□□ 0.03
LETMD1-228ENST00000550929 GLI2P10070 1586 aa15.24■□□□□ 0.03
LETMD1-228ENST00000550929 KDM4FA0A1W2PPD8 638 aa15.23■□□□□ 0.03
LETMD1-228ENST00000550929 PPRC1Q5VV67 1664 aaKnown RBP15.2■□□□□ 0.02
LETMD1-228ENST00000550929 COL17A1Q9UMD9 1497 aaPredicted RBP15.19■□□□□ 0.02
LETMD1-228ENST00000550929 WDR7Q9Y4E6 1490 aa15.19■□□□□ 0.02
LETMD1-228ENST00000550929 ABCA8O94911 1581 aa15.19■□□□□ 0.02
LETMD1-228ENST00000550929 EHMT2Q96KQ7 1210 aa15.17■□□□□ 0.02
LETMD1-228ENST00000550929 C1QBPQ07021 282 aaKnown RBP15.16■□□□□ 0.02
LETMD1-228ENST00000550929 MAP3K4Q9Y6R4 1608 aa15.15■□□□□ 0.02
LETMD1-228ENST00000550929 CD109Q6YHK3 1445 aa15.14■□□□□ 0.01
LETMD1-228ENST00000550929 TEX14Q8IWB6 1497 aa15.13■□□□□ 0.01
LETMD1-228ENST00000550929 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.12■□□□□ 0.01
LETMD1-228ENST00000550929 HNRNPUL2Q1KMD3 747 aaKnown RBP15.12■□□□□ 0.01
LETMD1-228ENST00000550929 ATP10BO94823 1461 aa15.11■□□□□ 0.01
LETMD1-228ENST00000550929 EEA1Q15075 1411 aa15.11■□□□□ 0.01
LETMD1-228ENST00000550929 FHOD3Q2V2M9 1422 aa15.08■□□□□ 0
LETMD1-228ENST00000550929 SAMD9Q5K651 1589 aa15.07■□□□□ 0
LETMD1-228ENST00000550929 MAGI3Q5TCQ9 1506 aa15.06■□□□□ 0
LETMD1-228ENST00000550929 ADGRL1O94910 1474 aa15.05■□□□□ 0
LETMD1-228ENST00000550929 CFAP43Q8NDM7 1665 aa15.03■□□□□ -0
LETMD1-228ENST00000550929 RAPGEF6Q8TEU7 1601 aa15.03■□□□□ -0
LETMD1-228ENST00000550929 KCNA4P22459 653 aa15.03■□□□□ -0
LETMD1-228ENST00000550929 UBTFP17480 764 aaKnown RBP15.02■□□□□ -0
LETMD1-228ENST00000550929 NUP153P49790 1475 aaKnown RBP15□□□□□ -0.01
LETMD1-228ENST00000550929 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15□□□□□ -0.013e-14■□□□□ 10.9
LETMD1-228ENST00000550929 PLEKHD1A6NEE1 506 aa14.98□□□□□ -0.01
LETMD1-228ENST00000550929 ATP1B4Q9UN42 357 aaPredicted RBP14.98□□□□□ -0.01
LETMD1-228ENST00000550929 RAPGEF3O95398 923 aa14.98□□□□□ -0.01
LETMD1-228ENST00000550929 KIF21BO75037 1637 aa14.97□□□□□ -0.01
LETMD1-228ENST00000550929 ABCA9Q8IUA7 1624 aa14.95□□□□□ -0.02
LETMD1-228ENST00000550929 ARAP3Q8WWN8 1544 aa14.93□□□□□ -0.02
LETMD1-228ENST00000550929 EFCAB5A4FU69 1503 aa14.92□□□□□ -0.02
LETMD1-228ENST00000550929 PHLDB1Q86UU1 1377 aa14.9□□□□□ -0.02
LETMD1-228ENST00000550929 CDK13Q14004 1512 aaKnown RBP14.9□□□□□ -0.02
LETMD1-228ENST00000550929 NEO1Q92859 1461 aa14.88□□□□□ -0.03
LETMD1-228ENST00000550929 ARHGAP35Q9NRY4 1499 aa14.87□□□□□ -0.03
LETMD1-228ENST00000550929 ARID4BQ4LE39 1312 aaPredicted RBP14.87□□□□□ -0.03
LETMD1-228ENST00000550929 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms