RNA–Protein interactions for RNA: ENST00000550504.5

RAB5C-207, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5C, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-207ENST00000550504 RIMBP3CA6NJZ7 1639 aa16.72■□□□□ 0.27
RAB5C-207ENST00000550504 RIMBP3BA6NNM3 1639 aa16.72■□□□□ 0.27
RAB5C-207ENST00000550504 RIMBP3Q9UFD9 1639 aa16.72■□□□□ 0.27
RAB5C-207ENST00000550504 CEP170Q5SW79 1584 aa16.66■□□□□ 0.26
RAB5C-207ENST00000550504 TNIKQ9UKE5 1360 aa16.64■□□□□ 0.25
RAB5C-207ENST00000550504 NUP160Q12769 1436 aa16.63■□□□□ 0.25
RAB5C-207ENST00000550504 CTTNBP2Q8WZ74 1663 aa16.63■□□□□ 0.25
RAB5C-207ENST00000550504 RANGAP1P46060 587 aaPredicted RBP16.63■□□□□ 0.25
RAB5C-207ENST00000550504 ARHGEF11O15085 1522 aa16.63■□□□□ 0.25
RAB5C-207ENST00000550504 KIAA0586Q9BVV6 1533 aa16.6■□□□□ 0.25
RAB5C-207ENST00000550504 IQGAP2Q13576 1575 aa16.58■□□□□ 0.24
RAB5C-207ENST00000550504 CLASP1Q7Z460 1538 aa16.54■□□□□ 0.24
RAB5C-207ENST00000550504 CEP162Q5TB80 1403 aa16.53■□□□□ 0.24
RAB5C-207ENST00000550504 CLIP1P30622 1438 aa16.51■□□□□ 0.23
RAB5C-207ENST00000550504 JPH4Q96JJ6 628 aa16.5■□□□□ 0.23
RAB5C-207ENST00000550504 UGGT2Q9NYU1 1516 aa16.48■□□□□ 0.23
RAB5C-207ENST00000550504 P3H3Q8IVL6 736 aa16.47■□□□□ 0.23
RAB5C-207ENST00000550504 SHROOM2Q13796 1616 aa16.46■□□□□ 0.23
RAB5C-207ENST00000550504 ARAP1Q96P48 1450 aa16.46■□□□□ 0.23
RAB5C-207ENST00000550504 ARHGAP35Q9NRY4 1499 aa16.45■□□□□ 0.22
RAB5C-207ENST00000550504 PRG4Q92954 1404 aaPredicted RBP16.45■□□□□ 0.22
RAB5C-207ENST00000550504 SAMD9Q5K651 1589 aa16.43■□□□□ 0.22
RAB5C-207ENST00000550504 EFCAB5A4FU69 1503 aa16.43■□□□□ 0.22
RAB5C-207ENST00000550504 DISP1Q96F81 1524 aa16.43■□□□□ 0.22
RAB5C-207ENST00000550504 KIAA0556O60303 1618 aa16.41■□□□□ 0.22
RAB5C-207ENST00000550504 FHOD3Q2V2M9 1422 aa16.41■□□□□ 0.22
RAB5C-207ENST00000550504 CARMIL2Q6F5E8 1435 aa16.41■□□□□ 0.22
RAB5C-207ENST00000550504 ERCC6L2Q5T890 1561 aa16.41■□□□□ 0.22
RAB5C-207ENST00000550504 TTBK1Q5TCY1 1321 aaPredicted RBP16.4■□□□□ 0.22
RAB5C-207ENST00000550504 CYB5RLQ6IPT4 315 aa16.37■□□□□ 0.21
RAB5C-207ENST00000550504 PTPRGP23470 1445 aa16.3■□□□□ 0.2
RAB5C-207ENST00000550504 VPS8Q8N3P4 1428 aa16.29■□□□□ 0.2
RAB5C-207ENST00000550504 FMN1Q68DA7 1419 aa16.28■□□□□ 0.2
RAB5C-207ENST00000550504 ATP1B4Q9UN42 357 aaPredicted RBP16.26■□□□□ 0.19
RAB5C-207ENST00000550504 PCF11O94913 1555 aaKnown RBP16.25■□□□□ 0.19
RAB5C-207ENST00000550504 PLB1Q6P1J6 1458 aa16.23■□□□□ 0.19
RAB5C-207ENST00000550504 CASKIN1Q8WXD9 1431 aa16.21■□□□□ 0.19
RAB5C-207ENST00000550504 RAPGEF6Q8TEU7 1601 aa16.21■□□□□ 0.19
RAB5C-207ENST00000550504 ABCA8O94911 1581 aa16.2■□□□□ 0.18
RAB5C-207ENST00000550504 FYCO1Q9BQS8 1478 aa16.19■□□□□ 0.18
RAB5C-207ENST00000550504 ARID3CA6NKF2 412 aa16.19■□□□□ 0.18
RAB5C-207ENST00000550504 UACAQ9BZF9 1416 aa16.19■□□□□ 0.18
RAB5C-207ENST00000550504 TRHP20396 242 aaPredicted RBP16.18■□□□□ 0.18
RAB5C-207ENST00000550504 HECW1Q76N89 1606 aa16.18■□□□□ 0.18
RAB5C-207ENST00000550504 NUP153P49790 1475 aaKnown RBP16.16■□□□□ 0.18
RAB5C-207ENST00000550504 ABCC2Q92887 1545 aa16.14■□□□□ 0.18
RAB5C-207ENST00000550504 APLP2Q06481 763 aa16.14■□□□□ 0.17
RAB5C-207ENST00000550504 LRRIQ1Q96JM4 1722 aa16.14■□□□□ 0.17
RAB5C-207ENST00000550504 ADCY10Q96PN6 1610 aa16.12■□□□□ 0.17
RAB5C-207ENST00000550504 UHRF1BP1LA0JNW5 1464 aa16.12■□□□□ 0.17
RAB5C-207ENST00000550504 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.12■□□□□ 0.17
RAB5C-207ENST00000550504 HNRNPUL2Q1KMD3 747 aaKnown RBP16.12■□□□□ 0.17
RAB5C-207ENST00000550504 EPRSP07814 1512 aaKnown RBP16.12■□□□□ 0.17
RAB5C-207ENST00000550504 CDK13Q14004 1512 aaKnown RBP16.12■□□□□ 0.17
RAB5C-207ENST00000550504 PPARGC1BQ86YN6 1023 aaKnown RBP16.09■□□□□ 0.17
RAB5C-207ENST00000550504 ATP10BO94823 1461 aa16.09■□□□□ 0.17
RAB5C-207ENST00000550504 CCDC18Q5T9S5 1454 aa16.09■□□□□ 0.17
RAB5C-207ENST00000550504 TIAM1Q13009 1591 aa16.09■□□□□ 0.17
RAB5C-207ENST00000550504 CFAP43Q8NDM7 1665 aa16.07■□□□□ 0.16
RAB5C-207ENST00000550504 ZCCHC11Q5TAX3 1644 aaKnown RBP16.05■□□□□ 0.16
RAB5C-207ENST00000550504 KDM5BQ9UGL1 1544 aa16.05■□□□□ 0.16
RAB5C-207ENST00000550504 NPM1P06748 294 aaKnown RBP eCLIP16.05■□□□□ 0.16
RAB5C-207ENST00000550504 KANK4Q5T7N3 995 aaPredicted RBP16.05■□□□□ 0.16
RAB5C-207ENST00000550504 MAP3K1Q13233 1512 aa16.04■□□□□ 0.16
RAB5C-207ENST00000550504 MAGI3Q5TCQ9 1506 aa16.01■□□□□ 0.15
RAB5C-207ENST00000550504 CDK11AQ9UQ88 783 aaPredicted RBP16.01■□□□□ 0.15
RAB5C-207ENST00000550504 MTUS2Q5JR59 1369 aa16■□□□□ 0.15
RAB5C-207ENST00000550504 LRRC9Q6ZRR7 1453 aa16■□□□□ 0.15
RAB5C-207ENST00000550504 PLEKHD1A6NEE1 506 aa16■□□□□ 0.15
RAB5C-207ENST00000550504 EHBP1L1Q8N3D4 1523 aa15.97■□□□□ 0.15
RAB5C-207ENST00000550504 TROQ12816 1431 aaPredicted RBP15.95■□□□□ 0.14
RAB5C-207ENST00000550504 ASXL2Q76L83 1435 aa15.95■□□□□ 0.14
RAB5C-207ENST00000550504 KIF13AQ9H1H9 1805 aa15.94■□□□□ 0.14
RAB5C-207ENST00000550504 WDR7Q9Y4E6 1490 aa15.93■□□□□ 0.14
RAB5C-207ENST00000550504 KCNH8Q96L42 1107 aa15.93■□□□□ 0.14
RAB5C-207ENST00000550504 KIF14Q15058 1648 aa15.91■□□□□ 0.14
RAB5C-207ENST00000550504 SUPT6HQ7KZ85 1726 aaKnown RBP15.91■□□□□ 0.14
RAB5C-207ENST00000550504 MAPKBP1O60336 1514 aa15.9■□□□□ 0.14
RAB5C-207ENST00000550504 NCOA2Q15596 1464 aa15.89■□□□□ 0.13
RAB5C-207ENST00000550504 AEBP2Q6ZN18 517 aaPredicted RBP15.87■□□□□ 0.13
RAB5C-207ENST00000550504 PHLDB1Q86UU1 1377 aa15.85■□□□□ 0.13
RAB5C-207ENST00000550504 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.84■□□□□ 0.13
RAB5C-207ENST00000550504 CCNB3Q8WWL7 1395 aa15.84■□□□□ 0.13
RAB5C-207ENST00000550504 ABCC10Q5T3U5 1492 aa15.84■□□□□ 0.13
RAB5C-207ENST00000550504 TTC37Q6PGP7 1564 aa15.83■□□□□ 0.13
RAB5C-207ENST00000550504 MYOM3Q5VTT5 1437 aa15.8■□□□□ 0.12
RAB5C-207ENST00000550504 ABCA9Q8IUA7 1624 aa15.79■□□□□ 0.12
RAB5C-207ENST00000550504 DIP2BQ9P265 1576 aa15.79■□□□□ 0.12
RAB5C-207ENST00000550504 GPATCH8Q9UKJ3 1502 aaKnown RBP15.79■□□□□ 0.12
RAB5C-207ENST00000550504 FAM69CQ0P6D2 419 aa15.79■□□□□ 0.12
RAB5C-207ENST00000550504 CDC42BPAQ5VT25 1732 aa15.78■□□□□ 0.12
RAB5C-207ENST00000550504 MYO5CQ9NQX4 1742 aa15.77■□□□□ 0.12
RAB5C-207ENST00000550504 ITSN2Q9NZM3 1697 aa15.77■□□□□ 0.12
RAB5C-207ENST00000550504 GLI2P10070 1586 aa15.76■□□□□ 0.11
RAB5C-207ENST00000550504 CFDP1Q9UEE9 299 aaPredicted RBP15.76■□□□□ 0.11
RAB5C-207ENST00000550504 FGD6Q6ZV73 1430 aa15.76■□□□□ 0.11
RAB5C-207ENST00000550504 ZNF777Q9ULD5 760 aaPredicted RBP15.75■□□□□ 0.11
RAB5C-207ENST00000550504 CD109Q6YHK3 1445 aa15.75■□□□□ 0.11
RAB5C-207ENST00000550504 PREX2Q70Z35 1606 aa15.75■□□□□ 0.11
RAB5C-207ENST00000550504 PLCH2O75038 1416 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms