RNA–Protein interactions for RNA: ENST00000550104.5

ATXN2-219, Transcript of ataxin 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ATXN2, Length 4,648 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-219ENST00000550104 SIN3AQ96ST3 1273 aa23.67■■□□□ 1.38
ATXN2-219ENST00000550104 BCANQ96GW7 911 aa23.66■■□□□ 1.38
ATXN2-219ENST00000550104 CLSPNQ9HAW4 1339 aa23.66■■□□□ 1.38
ATXN2-219ENST00000550104 FANCD2Q9BXW9 1451 aa23.64■■□□□ 1.37
ATXN2-219ENST00000550104 IGF1RP08069 1367 aa23.61■■□□□ 1.37
ATXN2-219ENST00000550104 PDS5BQ9NTI5 1447 aa23.6■■□□□ 1.37
ATXN2-219ENST00000550104 CFTRP13569 1480 aa23.57■■□□□ 1.36
ATXN2-219ENST00000550104 FGD5Q6ZNL6 1462 aa23.57■■□□□ 1.36
ATXN2-219ENST00000550104 KIF21BO75037 1637 aa23.57■■□□□ 1.36
ATXN2-219ENST00000550104 ERICH6Q7L0X2 663 aa23.56■■□□□ 1.36
ATXN2-219ENST00000550104 FHOD3Q2V2M9 1422 aa23.56■■□□□ 1.36
ATXN2-219ENST00000550104 RAB3GAP2Q9H2M9 1393 aa23.5■■□□□ 1.35
ATXN2-219ENST00000550104 TOP2BQ02880 1626 aa23.5■■□□□ 1.35
ATXN2-219ENST00000550104 HMGXB3Q12766 1538 aa23.49■■□□□ 1.35
ATXN2-219ENST00000550104 PEG3Q9GZU2 1588 aa23.49■■□□□ 1.35
ATXN2-219ENST00000550104 SETD5Q9C0A6 1442 aa23.49■■□□□ 1.35
ATXN2-219ENST00000550104 RAD54L2Q9Y4B4 1467 aa23.48■■□□□ 1.35
ATXN2-219ENST00000550104 CUX1P39880 1505 aa23.47■■□□□ 1.35
ATXN2-219ENST00000550104 ARHGAP35Q9NRY4 1499 aa23.47■■□□□ 1.35
ATXN2-219ENST00000550104 ERCC6Q03468 1493 aa23.46■■□□□ 1.35
ATXN2-219ENST00000550104 PRXQ9BXM0 1461 aa23.43■■□□□ 1.34
ATXN2-219ENST00000550104 SLC4A1APQ9BWU0 796 aaKnown RBP23.43■■□□□ 1.34
ATXN2-219ENST00000550104 FMN1Q68DA7 1419 aa23.43■■□□□ 1.34
ATXN2-219ENST00000550104 ARAP1Q96P48 1450 aa23.41■■□□□ 1.34
ATXN2-219ENST00000550104 DHX57Q6P158 1386 aaKnown RBP23.41■■□□□ 1.34
ATXN2-219ENST00000550104 TSPY4P0CV99 314 aa23.39■■□□□ 1.34
ATXN2-219ENST00000550104 TSPY10P0CW01 314 aa23.39■■□□□ 1.34
ATXN2-219ENST00000550104 CFDP1Q9UEE9 299 aaPredicted RBP23.39■■□□□ 1.34
ATXN2-219ENST00000550104 ERICH3Q5RHP9 1530 aa23.38■■□□□ 1.33
ATXN2-219ENST00000550104 PLEKHD1A6NEE1 506 aa23.37■■□□□ 1.33
ATXN2-219ENST00000550104 HNRNPUQ00839 825 aaKnown RBP eCLIP23.33■■□□□ 1.33
ATXN2-219ENST00000550104 NESP48681 1621 aa23.33■■□□□ 1.33
ATXN2-219ENST00000550104 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.32■■□□□ 1.323e-7■■□□□ 13.5
ATXN2-219ENST00000550104 FKBP8Q14318 412 aa23.32■■□□□ 1.32
ATXN2-219ENST00000550104 EIF4G2P78344 907 aaKnown RBP eCLIP23.31■■□□□ 1.323e-9■■■■□ 21.5
ATXN2-219ENST00000550104 CC2D2AQ9P2K1 1620 aa23.31■■□□□ 1.32
ATXN2-219ENST00000550104 KDM2AQ9Y2K7 1162 aa23.28■■□□□ 1.32
ATXN2-219ENST00000550104 FAM9BQ8IZU0 186 aa23.27■■□□□ 1.32
ATXN2-219ENST00000550104 KCNH8Q96L42 1107 aa23.24■■□□□ 1.31
ATXN2-219ENST00000550104 GAPVD1Q14C86 1478 aa23.23■■□□□ 1.31
ATXN2-219ENST00000550104 TIMELESSQ9UNS1 1208 aa23.23■■□□□ 1.31
ATXN2-219ENST00000550104 PHLDB1Q86UU1 1377 aa23.21■■□□□ 1.31
ATXN2-219ENST00000550104 FOXD1Q16676 465 aa23.19■■□□□ 1.3
ATXN2-219ENST00000550104 LRRC9Q6ZRR7 1453 aa23.15■■□□□ 1.3
ATXN2-219ENST00000550104 MRS2Q9HD23 443 aa23.15■■□□□ 1.3
ATXN2-219ENST00000550104 POLA1P09884 1462 aaPredicted RBP23.14■■□□□ 1.29
ATXN2-219ENST00000550104 TOPBP1Q92547 1522 aa23.14■■□□□ 1.29
ATXN2-219ENST00000550104 PPP1R15AO75807 674 aaPredicted RBP23.13■■□□□ 1.29
ATXN2-219ENST00000550104 DNAJC5BQ9UF47 199 aa23.12■■□□□ 1.29
ATXN2-219ENST00000550104 RRBP1Q9P2E9 1410 aaKnown RBP23.1■■□□□ 1.29
ATXN2-219ENST00000550104 AQRO60306 1485 aaKnown RBP eCLIP23.09■■□□□ 1.291e-6■■■■■ 28.2
ATXN2-219ENST00000550104 MPHOSPH9Q99550 1183 aa23.07■■□□□ 1.28
ATXN2-219ENST00000550104 RGL3Q3MIN7 710 aa23.07■■□□□ 1.28
ATXN2-219ENST00000550104 BIVM-ERCC5R4GMW8 1640 aa23.05■■□□□ 1.28
ATXN2-219ENST00000550104 CARMIL2Q6F5E8 1435 aa23.03■■□□□ 1.28
ATXN2-219ENST00000550104 CASKIN1Q8WXD9 1431 aa23.03■■□□□ 1.28
ATXN2-219ENST00000550104 IRX6P78412 446 aaPredicted RBP23.01■■□□□ 1.27
ATXN2-219ENST00000550104 TMC1Q8TDI8 760 aa23.01■■□□□ 1.27
ATXN2-219ENST00000550104 HSPA5P11021 654 aaKnown RBP23.01■■□□□ 1.27
ATXN2-219ENST00000550104 JPH4Q96JJ6 628 aa23.01■■□□□ 1.27
ATXN2-219ENST00000550104 FGD6Q6ZV73 1430 aa23■■□□□ 1.27
ATXN2-219ENST00000550104 DNMBPQ6XZF7 1577 aa22.99■■□□□ 1.27
ATXN2-219ENST00000550104 NPM1P06748 294 aaKnown RBP eCLIP22.99■■□□□ 1.27
ATXN2-219ENST00000550104 CHGAP10645 457 aaKnown RBP22.99■■□□□ 1.27
ATXN2-219ENST00000550104 SALL2Q9Y467 1007 aaPredicted RBP22.98■■□□□ 1.27
ATXN2-219ENST00000550104 CCDC18Q5T9S5 1454 aa22.96■■□□□ 1.27
ATXN2-219ENST00000550104 CARD11Q9BXL7 1154 aa22.96■■□□□ 1.27
ATXN2-219ENST00000550104 PKD2Q13563 968 aa22.95■■□□□ 1.26
ATXN2-219ENST00000550104 SENP3-EIF4A1A0A087X0R7 540 aa22.94■■□□□ 1.26
ATXN2-219ENST00000550104 FYCO1Q9BQS8 1478 aa22.93■■□□□ 1.26
ATXN2-219ENST00000550104 L3MBTL2Q969R5 705 aa22.93■■□□□ 1.26
ATXN2-219ENST00000550104 TIAM1Q13009 1591 aa22.93■■□□□ 1.26
ATXN2-219ENST00000550104 ABCA10Q8WWZ4 1543 aa22.93■■□□□ 1.26
ATXN2-219ENST00000550104 SUPT16HQ9Y5B9 1047 aaKnown RBP22.92■■□□□ 1.26
ATXN2-219ENST00000550104 MYOM3Q5VTT5 1437 aa22.91■■□□□ 1.26
ATXN2-219ENST00000550104 NCOA2Q15596 1464 aa22.88■■□□□ 1.25
ATXN2-219ENST00000550104 CCER2I3L3R5 266 aa22.87■■□□□ 1.25
ATXN2-219ENST00000550104 EFCAB5A4FU69 1503 aa22.86■■□□□ 1.25
ATXN2-219ENST00000550104 DCAF11Q8TEB1 546 aa22.86■■□□□ 1.25
ATXN2-219ENST00000550104 ZNF644Q9H582 1327 aaPredicted RBP22.86■■□□□ 1.25
ATXN2-219ENST00000550104 HNRNPMP52272 730 aaKnown RBP eCLIP22.83■■□□□ 1.251e-6■■□□□ 14.5
ATXN2-219ENST00000550104 GRIN2BQ13224 1484 aa22.83■■□□□ 1.25
ATXN2-219ENST00000550104 NUP155O75694 1391 aa22.82■■□□□ 1.24
ATXN2-219ENST00000550104 ANKRD30AQ9BXX3 1397 aa22.82■■□□□ 1.24
ATXN2-219ENST00000550104 PCF11O94913 1555 aaKnown RBP22.78■■□□□ 1.24
ATXN2-219ENST00000550104 URB2Q14146 1524 aaKnown RBP22.78■■□□□ 1.24
ATXN2-219ENST00000550104 LAMC3Q9Y6N6 1575 aa22.77■■□□□ 1.24
ATXN2-219ENST00000550104 MRC2Q9UBG0 1479 aa22.77■■□□□ 1.24
ATXN2-219ENST00000550104 UACAQ9BZF9 1416 aa22.77■■□□□ 1.24
ATXN2-219ENST00000550104 DAXXQ9UER7 740 aaPredicted RBP22.76■■□□□ 1.23
ATXN2-219ENST00000550104 SENP3Q9H4L4 574 aaPredicted RBP22.69■■□□□ 1.22
ATXN2-219ENST00000550104 PTPRGP23470 1445 aa22.68■■□□□ 1.22
ATXN2-219ENST00000550104 PRDM2Q13029 1718 aa22.68■■□□□ 1.22
ATXN2-219ENST00000550104 CCDC136Q96JN2 1154 aa22.67■■□□□ 1.22
ATXN2-219ENST00000550104 IFT140Q96RY7 1462 aa22.66■■□□□ 1.22
ATXN2-219ENST00000550104 MAP3K1Q13233 1512 aa22.65■■□□□ 1.22
ATXN2-219ENST00000550104 CUL7Q14999 1698 aa22.65■■□□□ 1.22
ATXN2-219ENST00000550104 WDR43Q15061 677 aaKnown RBP eCLIP22.63■■□□□ 1.21
ATXN2-219ENST00000550104 HFM1A2PYH4 1435 aa22.62■■□□□ 1.21
ATXN2-219ENST00000550104 EHBP1L1Q8N3D4 1523 aa22.62■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms