RNA–Protein interactions for RNA: ENST00000550100.5

LETMD1-221, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 1,480 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-221ENST00000550100 CUL7Q14999 1698 aa20.23■□□□□ 0.83
LETMD1-221ENST00000550100 PRG4Q92954 1404 aaPredicted RBP20.21■□□□□ 0.83
LETMD1-221ENST00000550100 KIAA0586Q9BVV6 1533 aa20.16■□□□□ 0.82
LETMD1-221ENST00000550100 TRHP20396 242 aaPredicted RBP20.1■□□□□ 0.81
LETMD1-221ENST00000550100 RAPGEF2Q9Y4G8 1499 aa20.08■□□□□ 0.8
LETMD1-221ENST00000550100 PRXQ9BXM0 1461 aa20.01■□□□□ 0.79
LETMD1-221ENST00000550100 IQGAP2Q13576 1575 aa19.99■□□□□ 0.79
LETMD1-221ENST00000550100 CHIC1Q5VXU3 224 aa19.97■□□□□ 0.79
LETMD1-221ENST00000550100 TTBK1Q5TCY1 1321 aaPredicted RBP19.95■□□□□ 0.78
LETMD1-221ENST00000550100 DISP1Q96F81 1524 aa19.95■□□□□ 0.78
LETMD1-221ENST00000550100 CSRNP3Q8WYN3 585 aa19.95■□□□□ 0.78
LETMD1-221ENST00000550100 ADCY10Q96PN6 1610 aa19.93■□□□□ 0.78
LETMD1-221ENST00000550100 PTPRGP23470 1445 aa19.92■□□□□ 0.78
LETMD1-221ENST00000550100 UGGT2Q9NYU1 1516 aa19.91■□□□□ 0.78
LETMD1-221ENST00000550100 TNIKQ9UKE5 1360 aa19.91■□□□□ 0.78
LETMD1-221ENST00000550100 FAM9AQ8IZU1 332 aaPredicted RBP19.91■□□□□ 0.78
LETMD1-221ENST00000550100 CARMIL2Q6F5E8 1435 aa19.89■□□□□ 0.77
LETMD1-221ENST00000550100 CTTNBP2Q8WZ74 1663 aa19.85■□□□□ 0.77
LETMD1-221ENST00000550100 KIAA0556O60303 1618 aa19.82■□□□□ 0.76
LETMD1-221ENST00000550100 NPM1P06748 294 aaKnown RBP eCLIP19.81■□□□□ 0.76
LETMD1-221ENST00000550100 EEA1Q15075 1411 aa19.81■□□□□ 0.76
LETMD1-221ENST00000550100 KIF13AQ9H1H9 1805 aa19.8■□□□□ 0.76
LETMD1-221ENST00000550100 MAPKBP1O60336 1514 aa19.78■□□□□ 0.76
LETMD1-221ENST00000550100 UACAQ9BZF9 1416 aa19.78■□□□□ 0.76
LETMD1-221ENST00000550100 UHRF1BP1LA0JNW5 1464 aa19.76■□□□□ 0.75
LETMD1-221ENST00000550100 FAM69CQ0P6D2 419 aa19.75■□□□□ 0.75
LETMD1-221ENST00000550100 ABCC2Q92887 1545 aa19.75■□□□□ 0.75
LETMD1-221ENST00000550100 ABCC10Q5T3U5 1492 aa19.75■□□□□ 0.75
LETMD1-221ENST00000550100 P3H3Q8IVL6 736 aa19.74■□□□□ 0.75
LETMD1-221ENST00000550100 PLB1Q6P1J6 1458 aa19.72■□□□□ 0.75
LETMD1-221ENST00000550100 GOLGA3Q08378 1498 aa19.71■□□□□ 0.75
LETMD1-221ENST00000550100 EHMT2Q96KQ7 1210 aa19.71■□□□□ 0.75
LETMD1-221ENST00000550100 DIP2BQ9P265 1576 aa19.71■□□□□ 0.75
LETMD1-221ENST00000550100 RANGAP1P46060 587 aaPredicted RBP19.68■□□□□ 0.74
LETMD1-221ENST00000550100 KDM5BQ9UGL1 1544 aa19.68■□□□□ 0.74
LETMD1-221ENST00000550100 ASXL2Q76L83 1435 aa19.68■□□□□ 0.74
LETMD1-221ENST00000550100 KIF21BO75037 1637 aa19.67■□□□□ 0.74
LETMD1-221ENST00000550100 ABCA8O94911 1581 aa19.66■□□□□ 0.74
LETMD1-221ENST00000550100 SAMD9Q5K651 1589 aa19.64■□□□□ 0.73
LETMD1-221ENST00000550100 ZCCHC11Q5TAX3 1644 aaKnown RBP19.63■□□□□ 0.73
LETMD1-221ENST00000550100 ARID3CA6NKF2 412 aa19.59■□□□□ 0.73
LETMD1-221ENST00000550100 TSPOAP1O95153 1857 aa19.59■□□□□ 0.73
LETMD1-221ENST00000550100 FHOD3Q2V2M9 1422 aa19.57■□□□□ 0.72
LETMD1-221ENST00000550100 EPRSP07814 1512 aaKnown RBP19.56■□□□□ 0.72
LETMD1-221ENST00000550100 UBTFP17480 764 aaKnown RBP19.56■□□□□ 0.72
LETMD1-221ENST00000550100 GLI2P10070 1586 aa19.54■□□□□ 0.72
LETMD1-221ENST00000550100 ATP10BO94823 1461 aa19.53■□□□□ 0.72
LETMD1-221ENST00000550100 PPRC1Q5VV67 1664 aaKnown RBP19.52■□□□□ 0.72
LETMD1-221ENST00000550100 WDR7Q9Y4E6 1490 aa19.51■□□□□ 0.71
LETMD1-221ENST00000550100 KCNH8Q96L42 1107 aa19.5■□□□□ 0.71
LETMD1-221ENST00000550100 RAPGEF6Q8TEU7 1601 aa19.47■□□□□ 0.71
LETMD1-221ENST00000550100 MAP3K4Q9Y6R4 1608 aa19.47■□□□□ 0.71
LETMD1-221ENST00000550100 NUP153P49790 1475 aaKnown RBP19.46■□□□□ 0.71
LETMD1-221ENST00000550100 ARHGAP35Q9NRY4 1499 aa19.44■□□□□ 0.7
LETMD1-221ENST00000550100 EFCAB5A4FU69 1503 aa19.44■□□□□ 0.7
LETMD1-221ENST00000550100 COL17A1Q9UMD9 1497 aaPredicted RBP19.43■□□□□ 0.7
LETMD1-221ENST00000550100 KDM6BO15054 1643 aa19.4■□□□□ 0.7
LETMD1-221ENST00000550100 CD109Q6YHK3 1445 aa19.37■□□□□ 0.69
LETMD1-221ENST00000550100 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.37■□□□□ 0.69
LETMD1-221ENST00000550100 HNRNPUL2Q1KMD3 747 aaKnown RBP19.37■□□□□ 0.69
LETMD1-221ENST00000550100 MAGI3Q5TCQ9 1506 aa19.33■□□□□ 0.68
LETMD1-221ENST00000550100 CFAP43Q8NDM7 1665 aa19.32■□□□□ 0.68
LETMD1-221ENST00000550100 CDK13Q14004 1512 aaKnown RBP19.32■□□□□ 0.68
LETMD1-221ENST00000550100 TEX14Q8IWB6 1497 aa19.3■□□□□ 0.68
LETMD1-221ENST00000550100 ATP1B4Q9UN42 357 aaPredicted RBP19.29■□□□□ 0.68
LETMD1-221ENST00000550100 ABCA9Q8IUA7 1624 aa19.28■□□□□ 0.68
LETMD1-221ENST00000550100 FMN1Q68DA7 1419 aa19.28■□□□□ 0.68
LETMD1-221ENST00000550100 PLEKHD1A6NEE1 506 aa19.28■□□□□ 0.68
LETMD1-221ENST00000550100 LRRIQ1Q96JM4 1722 aa19.24■□□□□ 0.67
LETMD1-221ENST00000550100 LOC105371045A0A1W2PR82 267 aa19.22■□□□□ 0.67
LETMD1-221ENST00000550100 KDM4FA0A1W2PPD8 638 aa19.22■□□□□ 0.67
LETMD1-221ENST00000550100 CLIP1P30622 1438 aa19.21■□□□□ 0.67
LETMD1-221ENST00000550100 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.2■□□□□ 0.66
LETMD1-221ENST00000550100 HECW1Q76N89 1606 aa19.2■□□□□ 0.66
LETMD1-221ENST00000550100 PCF11O94913 1555 aaKnown RBP19.17■□□□□ 0.66
LETMD1-221ENST00000550100 TTC37Q6PGP7 1564 aa19.17■□□□□ 0.66
LETMD1-221ENST00000550100 ARAP3Q8WWN8 1544 aa19.17■□□□□ 0.66
LETMD1-221ENST00000550100 CASKIN1Q8WXD9 1431 aa19.17■□□□□ 0.66
LETMD1-221ENST00000550100 AEBP2Q6ZN18 517 aaPredicted RBP19.16■□□□□ 0.66
LETMD1-221ENST00000550100 RAPGEF3O95398 923 aa19.16■□□□□ 0.66
LETMD1-221ENST00000550100 NEO1Q92859 1461 aa19.12■□□□□ 0.65
LETMD1-221ENST00000550100 KIF14Q15058 1648 aa19.12■□□□□ 0.65
LETMD1-221ENST00000550100 TROQ12816 1431 aaPredicted RBP19.1■□□□□ 0.65
LETMD1-221ENST00000550100 PHLDB1Q86UU1 1377 aa19.1■□□□□ 0.65
LETMD1-221ENST00000550100 CEP162Q5TB80 1403 aa19.1■□□□□ 0.65
LETMD1-221ENST00000550100 AKNAQ7Z591 1439 aa19.09■□□□□ 0.65
LETMD1-221ENST00000550100 CDK11AQ9UQ88 783 aaPredicted RBP19.09■□□□□ 0.65
LETMD1-221ENST00000550100 FANCAO15360 1455 aa19.08■□□□□ 0.65
LETMD1-221ENST00000550100 FRMPD1Q5SYB0 1578 aa19.08■□□□□ 0.65
LETMD1-221ENST00000550100 PLCH2O75038 1416 aa19.08■□□□□ 0.64
LETMD1-221ENST00000550100 FYCO1Q9BQS8 1478 aa19.07■□□□□ 0.64
LETMD1-221ENST00000550100 ADGRL1O94910 1474 aa19.04■□□□□ 0.64
LETMD1-221ENST00000550100 CCDC18Q5T9S5 1454 aa19.04■□□□□ 0.64
LETMD1-221ENST00000550100 DENND4BO75064 1496 aaPredicted RBP19.01■□□□□ 0.63
LETMD1-221ENST00000550100 RICTORQ6R327 1708 aa19.01■□□□□ 0.63
LETMD1-221ENST00000550100 MYO5CQ9NQX4 1742 aa18.99■□□□□ 0.63
LETMD1-221ENST00000550100 SCAPERQ9BY12 1400 aa18.99■□□□□ 0.63
LETMD1-221ENST00000550100 EFCAB2Q5VUJ9 269 aa18.98■□□□□ 0.63
LETMD1-221ENST00000550100 CFAP74Q9C0B2 1584 aa18.97■□□□□ 0.63
LETMD1-221ENST00000550100 CDC42BPBQ9Y5S2 1711 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 102.2 ms