RNA–Protein interactions for RNA: ENST00000550013.1

RAB5C-205, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-205ENST00000550013 AEBP2Q6ZN18 517 aaPredicted RBP27.15■■□□□ 1.94
RAB5C-205ENST00000550013 IGF1RP08069 1367 aa27.14■■□□□ 1.94
RAB5C-205ENST00000550013 KIF27Q86VH2 1401 aa27.12■■□□□ 1.93
RAB5C-205ENST00000550013 CUL7Q14999 1698 aa27.11■■□□□ 1.93
RAB5C-205ENST00000550013 KIAA0586Q9BVV6 1533 aa27.09■■□□□ 1.93
RAB5C-205ENST00000550013 ADCY10Q96PN6 1610 aa27.07■■□□□ 1.92
RAB5C-205ENST00000550013 MAPKBP1O60336 1514 aa27.01■■□□□ 1.91
RAB5C-205ENST00000550013 NPM1P06748 294 aaKnown RBP eCLIP27.01■■□□□ 1.91
RAB5C-205ENST00000550013 ABCC10Q5T3U5 1492 aa27■■□□□ 1.91
RAB5C-205ENST00000550013 FAM69CQ0P6D2 419 aa26.99■■□□□ 1.91
RAB5C-205ENST00000550013 DIP2BQ9P265 1576 aa26.97■■□□□ 1.91
RAB5C-205ENST00000550013 CARMIL1Q5VZK9 1371 aa26.96■■□□□ 1.91
RAB5C-205ENST00000550013 PTPRGP23470 1445 aa26.87■■□□□ 1.89
RAB5C-205ENST00000550013 TTBK1Q5TCY1 1321 aaPredicted RBP26.86■■□□□ 1.89
RAB5C-205ENST00000550013 TSPOAP1O95153 1857 aa26.84■■□□□ 1.89
RAB5C-205ENST00000550013 IQGAP2Q13576 1575 aa26.84■■□□□ 1.89
RAB5C-205ENST00000550013 TNIKQ9UKE5 1360 aa26.81■■□□□ 1.88
RAB5C-205ENST00000550013 CARMIL2Q6F5E8 1435 aa26.81■■□□□ 1.88
RAB5C-205ENST00000550013 KDM6BO15054 1643 aa26.76■■□□□ 1.87
RAB5C-205ENST00000550013 ABCC2Q92887 1545 aa26.75■■□□□ 1.87
RAB5C-205ENST00000550013 DISP1Q96F81 1524 aa26.73■■□□□ 1.87
RAB5C-205ENST00000550013 RAPGEF2Q9Y4G8 1499 aa26.7■■□□□ 1.87
RAB5C-205ENST00000550013 ASXL2Q76L83 1435 aa26.68■■□□□ 1.86
RAB5C-205ENST00000550013 UHRF1BP1LA0JNW5 1464 aa26.68■■□□□ 1.86
RAB5C-205ENST00000550013 UACAQ9BZF9 1416 aa26.65■■□□□ 1.86
RAB5C-205ENST00000550013 UGGT2Q9NYU1 1516 aa26.65■■□□□ 1.86
RAB5C-205ENST00000550013 PLB1Q6P1J6 1458 aa26.64■■□□□ 1.86
RAB5C-205ENST00000550013 PPRC1Q5VV67 1664 aaKnown RBP26.62■■□□□ 1.85
RAB5C-205ENST00000550013 GLI2P10070 1586 aa26.62■■□□□ 1.85
RAB5C-205ENST00000550013 KIAA0556O60303 1618 aa26.6■■□□□ 1.85
RAB5C-205ENST00000550013 KDM5BQ9UGL1 1544 aa26.57■■□□□ 1.84
RAB5C-205ENST00000550013 KDM4FA0A1W2PPD8 638 aa26.56■■□□□ 1.84
RAB5C-205ENST00000550013 ZCCHC11Q5TAX3 1644 aaKnown RBP26.55■■□□□ 1.84
RAB5C-205ENST00000550013 CTTNBP2Q8WZ74 1663 aa26.54■■□□□ 1.84
RAB5C-205ENST00000550013 EPRSP07814 1512 aaKnown RBP26.52■■□□□ 1.84
RAB5C-205ENST00000550013 MAP3K4Q9Y6R4 1608 aa26.5■■□□□ 1.83
RAB5C-205ENST00000550013 COL17A1Q9UMD9 1497 aaPredicted RBP26.43■■□□□ 1.82
RAB5C-205ENST00000550013 GOLGA3Q08378 1498 aa26.4■■□□□ 1.82
RAB5C-205ENST00000550013 PRXQ9BXM0 1461 aa26.39■■□□□ 1.82
RAB5C-205ENST00000550013 WDR7Q9Y4E6 1490 aa26.39■■□□□ 1.82
RAB5C-205ENST00000550013 TEX14Q8IWB6 1497 aa26.38■■□□□ 1.81
RAB5C-205ENST00000550013 ABCA8O94911 1581 aa26.37■■□□□ 1.81
RAB5C-205ENST00000550013 ADGRL1O94910 1474 aa26.32■■□□□ 1.8
RAB5C-205ENST00000550013 KCNH8Q96L42 1107 aa26.27■■□□□ 1.8
RAB5C-205ENST00000550013 CFAP43Q8NDM7 1665 aa26.26■■□□□ 1.79
RAB5C-205ENST00000550013 CD109Q6YHK3 1445 aa26.24■■□□□ 1.79
RAB5C-205ENST00000550013 MAGI3Q5TCQ9 1506 aa26.22■■□□□ 1.79
RAB5C-205ENST00000550013 P3H3Q8IVL6 736 aa26.21■■□□□ 1.79
RAB5C-205ENST00000550013 ARID3CA6NKF2 412 aa26.19■■□□□ 1.78
RAB5C-205ENST00000550013 ATP10BO94823 1461 aa26.14■■□□□ 1.78
RAB5C-205ENST00000550013 CSRNP3Q8WYN3 585 aa26.13■■□□□ 1.77
RAB5C-205ENST00000550013 SAMD9Q5K651 1589 aa26.12■■□□□ 1.77
RAB5C-205ENST00000550013 FAM9AQ8IZU1 332 aaPredicted RBP26.08■■□□□ 1.77
RAB5C-205ENST00000550013 RAPGEF6Q8TEU7 1601 aa26.06■■□□□ 1.76
RAB5C-205ENST00000550013 ABCA9Q8IUA7 1624 aa26.04■■□□□ 1.76
RAB5C-205ENST00000550013 KIF21BO75037 1637 aa26.03■■□□□ 1.76
RAB5C-205ENST00000550013 ARAP3Q8WWN8 1544 aa26.03■■□□□ 1.76
RAB5C-205ENST00000550013 HECW2Q9P2P5 1572 aa26.02■■□□□ 1.76
RAB5C-205ENST00000550013 RANGAP1P46060 587 aaPredicted RBP25.99■■□□□ 1.75
RAB5C-205ENST00000550013 EEA1Q15075 1411 aa25.97■■□□□ 1.75
RAB5C-205ENST00000550013 NUP153P49790 1475 aaKnown RBP25.96■■□□□ 1.75
RAB5C-205ENST00000550013 FHOD3Q2V2M9 1422 aa25.96■■□□□ 1.75
RAB5C-205ENST00000550013 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.94■■□□□ 1.74
RAB5C-205ENST00000550013 HNRNPUL2Q1KMD3 747 aaKnown RBP25.94■■□□□ 1.74
RAB5C-205ENST00000550013 PHLDB1Q86UU1 1377 aa25.91■■□□□ 1.74
RAB5C-205ENST00000550013 RAPGEF3O95398 923 aa25.89■■□□□ 1.74
RAB5C-205ENST00000550013 ILDR1Q86SU0 546 aaPredicted RBP25.89■■□□□ 1.74
RAB5C-205ENST00000550013 NEO1Q92859 1461 aa25.89■■□□□ 1.73
RAB5C-205ENST00000550013 FRMPD1Q5SYB0 1578 aa25.86■■□□□ 1.73
RAB5C-205ENST00000550013 EFCAB5A4FU69 1503 aa25.81■■□□□ 1.72
RAB5C-205ENST00000550013 ADAMTSL3P82987 1691 aa25.8■■□□□ 1.72
RAB5C-205ENST00000550013 PLEKHD1A6NEE1 506 aa25.79■■□□□ 1.72
RAB5C-205ENST00000550013 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.75■■□□□ 1.71
RAB5C-205ENST00000550013 BCORL1Q5H9F3 1711 aa25.74■■□□□ 1.71
RAB5C-205ENST00000550013 TTC37Q6PGP7 1564 aa25.74■■□□□ 1.71
RAB5C-205ENST00000550013 PTPRMP28827 1452 aa25.74■■□□□ 1.71
RAB5C-205ENST00000550013 RICTORQ6R327 1708 aa25.74■■□□□ 1.71
RAB5C-205ENST00000550013 CDK13Q14004 1512 aaKnown RBP25.73■■□□□ 1.71
RAB5C-205ENST00000550013 DENND4BO75064 1496 aaPredicted RBP25.72■■□□□ 1.71
RAB5C-205ENST00000550013 AKNAQ7Z591 1439 aa25.71■■□□□ 1.71
RAB5C-205ENST00000550013 EHMT2Q96KQ7 1210 aa25.71■■□□□ 1.71
RAB5C-205ENST00000550013 ARHGEF40Q8TER5 1519 aa25.71■■□□□ 1.71
RAB5C-205ENST00000550013 FANCAO15360 1455 aa25.71■■□□□ 1.71
RAB5C-205ENST00000550013 CFAP74Q9C0B2 1584 aa25.7■■□□□ 1.71
RAB5C-205ENST00000550013 MADDQ8WXG6 1647 aa25.7■■□□□ 1.7
RAB5C-205ENST00000550013 ARID4BQ4LE39 1312 aaPredicted RBP25.69■■□□□ 1.7
RAB5C-205ENST00000550013 UBTFP17480 764 aaKnown RBP25.63■■□□□ 1.69
RAB5C-205ENST00000550013 ZMYM4Q5VZL5 1548 aa25.61■■□□□ 1.69
RAB5C-205ENST00000550013 RIMS1Q86UR5 1692 aaKnown RBP25.61■■□□□ 1.69
RAB5C-205ENST00000550013 SIGLEC1Q9BZZ2 1709 aa25.59■■□□□ 1.69
RAB5C-205ENST00000550013 ARHGAP35Q9NRY4 1499 aa25.59■■□□□ 1.69
RAB5C-205ENST00000550013 YEATS2Q9ULM3 1422 aa25.58■■□□□ 1.69
RAB5C-205ENST00000550013 ATP1B4Q9UN42 357 aaPredicted RBP25.58■■□□□ 1.69
RAB5C-205ENST00000550013 HECW1Q76N89 1606 aa25.58■■□□□ 1.69
RAB5C-205ENST00000550013 ZFYVE16Q7Z3T8 1539 aa25.58■■□□□ 1.68
RAB5C-205ENST00000550013 FMN1Q68DA7 1419 aa25.57■■□□□ 1.68
RAB5C-205ENST00000550013 PLCH2O75038 1416 aa25.55■■□□□ 1.68
RAB5C-205ENST00000550013 CHIC1Q5VXU3 224 aa25.55■■□□□ 1.68
RAB5C-205ENST00000550013 PCF11O94913 1555 aaKnown RBP25.55■■□□□ 1.68
RAB5C-205ENST00000550013 SCAPERQ9BY12 1400 aa25.54■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms