RNA–Protein interactions for RNA: ENST00000549883.5

HDAC7-229, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-229ENST00000549883 JPH4Q96JJ6 628 aa16.72■□□□□ 0.27
HDAC7-229ENST00000549883 PRG4Q92954 1404 aaPredicted RBP16.71■□□□□ 0.27
HDAC7-229ENST00000549883 KIAA0586Q9BVV6 1533 aa16.68■□□□□ 0.26
HDAC7-229ENST00000549883 RAPGEF2Q9Y4G8 1499 aa16.63■□□□□ 0.25
HDAC7-229ENST00000549883 TRHP20396 242 aaPredicted RBP16.59■□□□□ 0.25
HDAC7-229ENST00000549883 IQGAP2Q13576 1575 aa16.59■□□□□ 0.25
HDAC7-229ENST00000549883 PRXQ9BXM0 1461 aa16.56■□□□□ 0.24
HDAC7-229ENST00000549883 CTTNBP2Q8WZ74 1663 aa16.53■□□□□ 0.24
HDAC7-229ENST00000549883 TTBK1Q5TCY1 1321 aaPredicted RBP16.53■□□□□ 0.24
HDAC7-229ENST00000549883 CHIC1Q5VXU3 224 aa16.53■□□□□ 0.24
HDAC7-229ENST00000549883 ADCY10Q96PN6 1610 aa16.52■□□□□ 0.23
HDAC7-229ENST00000549883 DISP1Q96F81 1524 aa16.51■□□□□ 0.23
HDAC7-229ENST00000549883 FAM9AQ8IZU1 332 aaPredicted RBP16.5■□□□□ 0.23
HDAC7-229ENST00000549883 CSRNP3Q8WYN3 585 aa16.5■□□□□ 0.23
HDAC7-229ENST00000549883 UGGT2Q9NYU1 1516 aa16.49■□□□□ 0.23
HDAC7-229ENST00000549883 PTPRGP23470 1445 aa16.47■□□□□ 0.23
HDAC7-229ENST00000549883 CARMIL2Q6F5E8 1435 aa16.46■□□□□ 0.23
HDAC7-229ENST00000549883 KIAA0556O60303 1618 aa16.45■□□□□ 0.22
HDAC7-229ENST00000549883 TNIKQ9UKE5 1360 aa16.45■□□□□ 0.22
HDAC7-229ENST00000549883 KIF13AQ9H1H9 1805 aa16.43■□□□□ 0.22
HDAC7-229ENST00000549883 EEA1Q15075 1411 aa16.41■□□□□ 0.22
HDAC7-229ENST00000549883 MAPKBP1O60336 1514 aa16.37■□□□□ 0.21
HDAC7-229ENST00000549883 NPM1P06748 294 aaKnown RBP eCLIP16.36■□□□□ 0.21
HDAC7-229ENST00000549883 EHMT2Q96KQ7 1210 aa16.36■□□□□ 0.21
HDAC7-229ENST00000549883 UACAQ9BZF9 1416 aa16.36■□□□□ 0.21
HDAC7-229ENST00000549883 ABCC2Q92887 1545 aa16.35■□□□□ 0.21
HDAC7-229ENST00000549883 KIF21BO75037 1637 aa16.34■□□□□ 0.21
HDAC7-229ENST00000549883 P3H3Q8IVL6 736 aa16.34■□□□□ 0.21
HDAC7-229ENST00000549883 UHRF1BP1LA0JNW5 1464 aa16.34■□□□□ 0.21
HDAC7-229ENST00000549883 GOLGA3Q08378 1498 aa16.33■□□□□ 0.2
HDAC7-229ENST00000549883 ABCC10Q5T3U5 1492 aa16.33■□□□□ 0.2
HDAC7-229ENST00000549883 PLB1Q6P1J6 1458 aa16.33■□□□□ 0.2
HDAC7-229ENST00000549883 DIP2BQ9P265 1576 aa16.33■□□□□ 0.2
HDAC7-229ENST00000549883 RANGAP1P46060 587 aaPredicted RBP16.32■□□□□ 0.2
HDAC7-229ENST00000549883 FAM69CQ0P6D2 419 aa16.31■□□□□ 0.2
HDAC7-229ENST00000549883 ZCCHC11Q5TAX3 1644 aaKnown RBP16.3■□□□□ 0.2
HDAC7-229ENST00000549883 SAMD9Q5K651 1589 aa16.3■□□□□ 0.2
HDAC7-229ENST00000549883 ABCA8O94911 1581 aa16.29■□□□□ 0.2
HDAC7-229ENST00000549883 KDM5BQ9UGL1 1544 aa16.28■□□□□ 0.2
HDAC7-229ENST00000549883 ASXL2Q76L83 1435 aa16.28■□□□□ 0.2
HDAC7-229ENST00000549883 TSPOAP1O95153 1857 aa16.27■□□□□ 0.2
HDAC7-229ENST00000549883 ARID3CA6NKF2 412 aa16.22■□□□□ 0.19
HDAC7-229ENST00000549883 FHOD3Q2V2M9 1422 aa16.21■□□□□ 0.19
HDAC7-229ENST00000549883 UBTFP17480 764 aaKnown RBP16.2■□□□□ 0.18
HDAC7-229ENST00000549883 PPRC1Q5VV67 1664 aaKnown RBP16.18■□□□□ 0.18
HDAC7-229ENST00000549883 EPRSP07814 1512 aaKnown RBP16.18■□□□□ 0.18
HDAC7-229ENST00000549883 GLI2P10070 1586 aa16.17■□□□□ 0.18
HDAC7-229ENST00000549883 RAPGEF6Q8TEU7 1601 aa16.16■□□□□ 0.18
HDAC7-229ENST00000549883 ATP10BO94823 1461 aa16.16■□□□□ 0.18
HDAC7-229ENST00000549883 WDR7Q9Y4E6 1490 aa16.15■□□□□ 0.18
HDAC7-229ENST00000549883 MAP3K4Q9Y6R4 1608 aa16.13■□□□□ 0.17
HDAC7-229ENST00000549883 EFCAB5A4FU69 1503 aa16.13■□□□□ 0.17
HDAC7-229ENST00000549883 NUP153P49790 1475 aaKnown RBP16.12■□□□□ 0.17
HDAC7-229ENST00000549883 KCNH8Q96L42 1107 aa16.12■□□□□ 0.17
HDAC7-229ENST00000549883 ARHGAP35Q9NRY4 1499 aa16.11■□□□□ 0.17
HDAC7-229ENST00000549883 KDM6BO15054 1643 aa16.08■□□□□ 0.17
HDAC7-229ENST00000549883 COL17A1Q9UMD9 1497 aaPredicted RBP16.04■□□□□ 0.16
HDAC7-229ENST00000549883 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.04■□□□□ 0.16
HDAC7-229ENST00000549883 HNRNPUL2Q1KMD3 747 aaKnown RBP16.04■□□□□ 0.16
HDAC7-229ENST00000549883 CFAP43Q8NDM7 1665 aa16.03■□□□□ 0.16
HDAC7-229ENST00000549883 CDK13Q14004 1512 aaKnown RBP16.02■□□□□ 0.15
HDAC7-229ENST00000549883 CD109Q6YHK3 1445 aa16.02■□□□□ 0.15
HDAC7-229ENST00000549883 LRRIQ1Q96JM4 1722 aa16■□□□□ 0.15
HDAC7-229ENST00000549883 ABCA9Q8IUA7 1624 aa15.99■□□□□ 0.15
HDAC7-229ENST00000549883 ATP1B4Q9UN42 357 aaPredicted RBP15.98■□□□□ 0.15
HDAC7-229ENST00000549883 MAGI3Q5TCQ9 1506 aa15.98■□□□□ 0.15
HDAC7-229ENST00000549883 TEX14Q8IWB6 1497 aa15.97■□□□□ 0.15
HDAC7-229ENST00000549883 FMN1Q68DA7 1419 aa15.97■□□□□ 0.15
HDAC7-229ENST00000549883 HECW1Q76N89 1606 aa15.95■□□□□ 0.14
HDAC7-229ENST00000549883 PCF11O94913 1555 aaKnown RBP15.94■□□□□ 0.14
HDAC7-229ENST00000549883 CLIP1P30622 1438 aa15.94■□□□□ 0.14
HDAC7-229ENST00000549883 PLEKHD1A6NEE1 506 aa15.93■□□□□ 0.14
HDAC7-229ENST00000549883 LOC105371045A0A1W2PR82 267 aa15.92■□□□□ 0.14
HDAC7-229ENST00000549883 TTC37Q6PGP7 1564 aa15.92■□□□□ 0.14
HDAC7-229ENST00000549883 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.91■□□□□ 0.14
HDAC7-229ENST00000549883 KIF14Q15058 1648 aa15.87■□□□□ 0.13
HDAC7-229ENST00000549883 CASKIN1Q8WXD9 1431 aa15.87■□□□□ 0.13
HDAC7-229ENST00000549883 ARAP3Q8WWN8 1544 aa15.85■□□□□ 0.13
HDAC7-229ENST00000549883 CEP162Q5TB80 1403 aa15.85■□□□□ 0.13
HDAC7-229ENST00000549883 KDM4FA0A1W2PPD8 638 aa15.83■□□□□ 0.12
HDAC7-229ENST00000549883 RAPGEF3O95398 923 aa15.83■□□□□ 0.12
HDAC7-229ENST00000549883 TROQ12816 1431 aaPredicted RBP15.82■□□□□ 0.12
HDAC7-229ENST00000549883 NEO1Q92859 1461 aa15.82■□□□□ 0.12
HDAC7-229ENST00000549883 FYCO1Q9BQS8 1478 aa15.82■□□□□ 0.12
HDAC7-229ENST00000549883 FRMPD1Q5SYB0 1578 aa15.82■□□□□ 0.12
HDAC7-229ENST00000549883 AEBP2Q6ZN18 517 aaPredicted RBP15.81■□□□□ 0.12
HDAC7-229ENST00000549883 FANCAO15360 1455 aa15.8■□□□□ 0.12
HDAC7-229ENST00000549883 MYO5CQ9NQX4 1742 aa15.8■□□□□ 0.12
HDAC7-229ENST00000549883 CCDC18Q5T9S5 1454 aa15.79■□□□□ 0.12
HDAC7-229ENST00000549883 AKNAQ7Z591 1439 aa15.78■□□□□ 0.12
HDAC7-229ENST00000549883 CDK11AQ9UQ88 783 aaPredicted RBP15.78■□□□□ 0.12
HDAC7-229ENST00000549883 PLCH2O75038 1416 aa15.77■□□□□ 0.12
HDAC7-229ENST00000549883 RICTORQ6R327 1708 aa15.77■□□□□ 0.12
HDAC7-229ENST00000549883 PHLDB1Q86UU1 1377 aa15.77■□□□□ 0.12
HDAC7-229ENST00000549883 CDC42BPBQ9Y5S2 1711 aa15.75■□□□□ 0.11
HDAC7-229ENST00000549883 ADGRL1O94910 1474 aa15.75■□□□□ 0.11
HDAC7-229ENST00000549883 CFAP74Q9C0B2 1584 aa15.75■□□□□ 0.11
HDAC7-229ENST00000549883 DENND4BO75064 1496 aaPredicted RBP15.73■□□□□ 0.11
HDAC7-229ENST00000549883 CDC42BPAQ5VT25 1732 aa15.72■□□□□ 0.11
HDAC7-229ENST00000549883 ARHGAP5Q13017 1502 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 414.5 ms