RNA–Protein interactions for RNA: ENST00000549165.1

GNPTAB-203, Transcript of N-acetylglucosamine-1-phosphate transferase subunits alpha and beta, humanhuman

TSL 1 (best) BASIC

Gene GNPTAB, Length 373 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNPTAB-203ENST00000549165 ADAMTS12P58397 1594 aa13.99□□□□□ -0.17
GNPTAB-203ENST00000549165 KCNA4P22459 653 aa13.95□□□□□ -0.18
GNPTAB-203ENST00000549165 DMRT2Q9Y5R5 561 aa13.95□□□□□ -0.18
GNPTAB-203ENST00000549165 GRIN2AQ12879 1464 aa13.94□□□□□ -0.18
GNPTAB-203ENST00000549165 ERICH3Q5RHP9 1530 aa13.94□□□□□ -0.18
GNPTAB-203ENST00000549165 ARAP1Q96P48 1450 aa13.93□□□□□ -0.18
GNPTAB-203ENST00000549165 FHAD1B1AJZ9 1412 aa13.91□□□□□ -0.18
GNPTAB-203ENST00000549165 CEP170Q5SW79 1584 aa13.91□□□□□ -0.18
GNPTAB-203ENST00000549165 NUP160Q12769 1436 aa13.89□□□□□ -0.19
GNPTAB-203ENST00000549165 CYB5RLQ6IPT4 315 aa13.86□□□□□ -0.19
GNPTAB-203ENST00000549165 KIF27Q86VH2 1401 aa13.84□□□□□ -0.19
GNPTAB-203ENST00000549165 ERCC6L2Q5T890 1561 aa13.83□□□□□ -0.2
GNPTAB-203ENST00000549165 IGF1RP08069 1367 aa13.82□□□□□ -0.2
GNPTAB-203ENST00000549165 RUSC2Q8N2Y8 1516 aa13.79□□□□□ -0.2
GNPTAB-203ENST00000549165 SHROOM2Q13796 1616 aa13.79□□□□□ -0.2
GNPTAB-203ENST00000549165 CUL7Q14999 1698 aa13.78□□□□□ -0.2
GNPTAB-203ENST00000549165 NPM3O75607 178 aaKnown RBP13.74□□□□□ -0.21
GNPTAB-203ENST00000549165 CARMIL1Q5VZK9 1371 aa13.72□□□□□ -0.21
GNPTAB-203ENST00000549165 RNF216Q9NWF9 866 aaPredicted RBP13.72□□□□□ -0.21
GNPTAB-203ENST00000549165 PRG4Q92954 1404 aaPredicted RBP13.71□□□□□ -0.22
GNPTAB-203ENST00000549165 KIAA0586Q9BVV6 1533 aa13.69□□□□□ -0.22
GNPTAB-203ENST00000549165 JPH4Q96JJ6 628 aa13.68□□□□□ -0.22
GNPTAB-203ENST00000549165 POTEDQ86YR6 584 aa13.66□□□□□ -0.22
GNPTAB-203ENST00000549165 HOXD11P31277 338 aaPredicted RBP13.64□□□□□ -0.23
GNPTAB-203ENST00000549165 RAPGEF2Q9Y4G8 1499 aa13.63□□□□□ -0.23
GNPTAB-203ENST00000549165 TRHP20396 242 aaPredicted RBP13.61□□□□□ -0.23
GNPTAB-203ENST00000549165 IQGAP2Q13576 1575 aa13.61□□□□□ -0.23
GNPTAB-203ENST00000549165 PRXQ9BXM0 1461 aa13.58□□□□□ -0.24
GNPTAB-203ENST00000549165 DISP1Q96F81 1524 aa13.55□□□□□ -0.24
GNPTAB-203ENST00000549165 ADCY10Q96PN6 1610 aa13.55□□□□□ -0.24
GNPTAB-203ENST00000549165 UGGT2Q9NYU1 1516 aa13.53□□□□□ -0.24
GNPTAB-203ENST00000549165 TTBK1Q5TCY1 1321 aaPredicted RBP13.52□□□□□ -0.25
GNPTAB-203ENST00000549165 CARMIL2Q6F5E8 1435 aa13.52□□□□□ -0.25
GNPTAB-203ENST00000549165 TNIKQ9UKE5 1360 aa13.51□□□□□ -0.25
GNPTAB-203ENST00000549165 CTTNBP2Q8WZ74 1663 aa13.5□□□□□ -0.25
GNPTAB-203ENST00000549165 KIAA0556O60303 1618 aa13.5□□□□□ -0.25
GNPTAB-203ENST00000549165 PTPRGP23470 1445 aa13.5□□□□□ -0.25
GNPTAB-203ENST00000549165 CSRNP3Q8WYN3 585 aa13.47□□□□□ -0.25
GNPTAB-203ENST00000549165 EEA1Q15075 1411 aa13.47□□□□□ -0.25
GNPTAB-203ENST00000549165 MAPKBP1O60336 1514 aa13.46□□□□□ -0.25
GNPTAB-203ENST00000549165 FAM9AQ8IZU1 332 aaPredicted RBP13.46□□□□□ -0.25
GNPTAB-203ENST00000549165 ABCC2Q92887 1545 aa13.43□□□□□ -0.26
GNPTAB-203ENST00000549165 DIP2BQ9P265 1576 aa13.42□□□□□ -0.26
GNPTAB-203ENST00000549165 UACAQ9BZF9 1416 aa13.42□□□□□ -0.26
GNPTAB-203ENST00000549165 KIF13AQ9H1H9 1805 aa13.42□□□□□ -0.26
GNPTAB-203ENST00000549165 UHRF1BP1LA0JNW5 1464 aa13.42□□□□□ -0.26
GNPTAB-203ENST00000549165 ABCC10Q5T3U5 1492 aa13.42□□□□□ -0.26
GNPTAB-203ENST00000549165 NPM1P06748 294 aaKnown RBP eCLIP13.41□□□□□ -0.26
GNPTAB-203ENST00000549165 DCAF8L1A6NGE4 600 aa13.4□□□□□ -0.26
GNPTAB-203ENST00000549165 GOLGA3Q08378 1498 aa13.4□□□□□ -0.26
GNPTAB-203ENST00000549165 PLB1Q6P1J6 1458 aa13.4□□□□□ -0.26
GNPTAB-203ENST00000549165 KIF21BO75037 1637 aa13.38□□□□□ -0.27
GNPTAB-203ENST00000549165 FAM69CQ0P6D2 419 aa13.37□□□□□ -0.27
GNPTAB-203ENST00000549165 ASXL2Q76L83 1435 aa13.37□□□□□ -0.27
GNPTAB-203ENST00000549165 KDM5BQ9UGL1 1544 aa13.36□□□□□ -0.27
GNPTAB-203ENST00000549165 ABCA8O94911 1581 aa13.36□□□□□ -0.27
GNPTAB-203ENST00000549165 SAMD9Q5K651 1589 aa13.36□□□□□ -0.27
GNPTAB-203ENST00000549165 ZCCHC11Q5TAX3 1644 aaKnown RBP13.35□□□□□ -0.27
GNPTAB-203ENST00000549165 P3H3Q8IVL6 736 aa13.34□□□□□ -0.27
GNPTAB-203ENST00000549165 SLC4A1APQ9BWU0 796 aaKnown RBP13.34□□□□□ -0.27
GNPTAB-203ENST00000549165 EHMT2Q96KQ7 1210 aa13.33□□□□□ -0.28
GNPTAB-203ENST00000549165 RANGAP1P46060 587 aaPredicted RBP13.32□□□□□ -0.28
GNPTAB-203ENST00000549165 FHOD3Q2V2M9 1422 aa13.3□□□□□ -0.28
GNPTAB-203ENST00000549165 EPRSP07814 1512 aaKnown RBP13.29□□□□□ -0.28
GNPTAB-203ENST00000549165 WDR7Q9Y4E6 1490 aa13.28□□□□□ -0.28
GNPTAB-203ENST00000549165 GLI2P10070 1586 aa13.28□□□□□ -0.28
GNPTAB-203ENST00000549165 ARID3CA6NKF2 412 aa13.27□□□□□ -0.29
GNPTAB-203ENST00000549165 PPRC1Q5VV67 1664 aaKnown RBP13.25□□□□□ -0.29
GNPTAB-203ENST00000549165 TSPOAP1O95153 1857 aa13.25□□□□□ -0.29
GNPTAB-203ENST00000549165 RAPGEF6Q8TEU7 1601 aa13.24□□□□□ -0.29
GNPTAB-203ENST00000549165 EFCAB5A4FU69 1503 aa13.24□□□□□ -0.29
GNPTAB-203ENST00000549165 ATP10BO94823 1461 aa13.23□□□□□ -0.29
GNPTAB-203ENST00000549165 UBTFP17480 764 aaKnown RBP13.23□□□□□ -0.29
GNPTAB-203ENST00000549165 MAP3K4Q9Y6R4 1608 aa13.23□□□□□ -0.29
GNPTAB-203ENST00000549165 NUP153P49790 1475 aaKnown RBP13.23□□□□□ -0.29
GNPTAB-203ENST00000549165 KDM6BO15054 1643 aa13.22□□□□□ -0.29
GNPTAB-203ENST00000549165 ARHGAP35Q9NRY4 1499 aa13.2□□□□□ -0.3
GNPTAB-203ENST00000549165 KCNH8Q96L42 1107 aa13.17□□□□□ -0.3
GNPTAB-203ENST00000549165 COL17A1Q9UMD9 1497 aaPredicted RBP13.16□□□□□ -0.3
GNPTAB-203ENST00000549165 CD109Q6YHK3 1445 aa13.14□□□□□ -0.31
GNPTAB-203ENST00000549165 CDK13Q14004 1512 aaKnown RBP13.14□□□□□ -0.31
GNPTAB-203ENST00000549165 TEX14Q8IWB6 1497 aa13.14□□□□□ -0.31
GNPTAB-203ENST00000549165 CFAP43Q8NDM7 1665 aa13.14□□□□□ -0.31
GNPTAB-203ENST00000549165 MAGI3Q5TCQ9 1506 aa13.13□□□□□ -0.31
GNPTAB-203ENST00000549165 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.12□□□□□ -0.31
GNPTAB-203ENST00000549165 HNRNPUL2Q1KMD3 747 aaKnown RBP13.12□□□□□ -0.31
GNPTAB-203ENST00000549165 ABCA9Q8IUA7 1624 aa13.11□□□□□ -0.31
GNPTAB-203ENST00000549165 FMN1Q68DA7 1419 aa13.11□□□□□ -0.31
GNPTAB-203ENST00000549165 HECW1Q76N89 1606 aa13.1□□□□□ -0.31
GNPTAB-203ENST00000549165 PCF11O94913 1555 aaKnown RBP13.07□□□□□ -0.32
GNPTAB-203ENST00000549165 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.07□□□□□ -0.32
GNPTAB-203ENST00000549165 CLIP1P30622 1438 aa13.05□□□□□ -0.32
GNPTAB-203ENST00000549165 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.05□□□□□ -0.32
GNPTAB-203ENST00000549165 ATP1B4Q9UN42 357 aaPredicted RBP13.05□□□□□ -0.32
GNPTAB-203ENST00000549165 TTC37Q6PGP7 1564 aa13.05□□□□□ -0.32
GNPTAB-203ENST00000549165 PLEKHD1A6NEE1 506 aa13.04□□□□□ -0.32
GNPTAB-203ENST00000549165 LRRIQ1Q96JM4 1722 aa13.04□□□□□ -0.32
GNPTAB-203ENST00000549165 CASKIN1Q8WXD9 1431 aa13.01□□□□□ -0.33
GNPTAB-203ENST00000549165 ARAP3Q8WWN8 1544 aa13.01□□□□□ -0.33
GNPTAB-203ENST00000549165 KIF14Q15058 1648 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms