RNA–Protein interactions for RNA: ENST00000549165.1

GNPTAB-203, Transcript of N-acetylglucosamine-1-phosphate transferase subunits alpha and beta, humanhuman

TSL 1 (best) BASIC

Gene GNPTAB, Length 373 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNPTAB-203ENST00000549165 AEBP2Q6ZN18 517 aaPredicted RBP20.5■□□□□ 0.87
GNPTAB-203ENST00000549165 CHIC1Q5VXU3 224 aa20.07■□□□□ 0.8
GNPTAB-203ENST00000549165 NISCHQ9Y2I1 1504 aa19.76■□□□□ 0.75
GNPTAB-203ENST00000549165 CCDC180Q9P1Z9 1646 aa17.6■□□□□ 0.41
GNPTAB-203ENST00000549165 PHF23Q9BUL5 403 aaPredicted RBP17.57■□□□□ 0.4
GNPTAB-203ENST00000549165 SENP3Q9H4L4 574 aaPredicted RBP17.54■□□□□ 0.4
GNPTAB-203ENST00000549165 ABCC9O60706 1549 aa17.42■□□□□ 0.38
GNPTAB-203ENST00000549165 RB1CC1Q8TDY2 1594 aa16.63■□□□□ 0.25
GNPTAB-203ENST00000549165 NACADO15069 1562 aa16.57■□□□□ 0.24
GNPTAB-203ENST00000549165 DCAF8L2P0C7V8 631 aa16.53■□□□□ 0.24
GNPTAB-203ENST00000549165 ZCCHC6Q5VYS8 1495 aaKnown RBP16.47■□□□□ 0.23
GNPTAB-203ENST00000549165 MYO15BQ96JP2 1530 aa16.42■□□□□ 0.22
GNPTAB-203ENST00000549165 PLPPR3Q6T4P5 718 aa16.34■□□□□ 0.21
GNPTAB-203ENST00000549165 DCAF1Q9Y4B6 1507 aa16.32■□□□□ 0.2
GNPTAB-203ENST00000549165 UNC13AQ9UPW8 1703 aa16.26■□□□□ 0.19
GNPTAB-203ENST00000549165 PABPN1Q86U42 306 aaKnown RBP eCLIP16.24■□□□□ 0.19
GNPTAB-203ENST00000549165 BICRAQ9NZM4 1560 aa16.19■□□□□ 0.18
GNPTAB-203ENST00000549165 FOXD1Q16676 465 aa16.18■□□□□ 0.18
GNPTAB-203ENST00000549165 SCRIBQ14160 1630 aa16.12■□□□□ 0.17
GNPTAB-203ENST00000549165 DNAJC5BQ9UF47 199 aa16.1■□□□□ 0.17
GNPTAB-203ENST00000549165 SHROOM4Q9ULL8 1493 aa15.94■□□□□ 0.14
GNPTAB-203ENST00000549165 EIF4G1Q04637 1599 aaKnown RBP15.76■□□□□ 0.11
GNPTAB-203ENST00000549165 CC2D2AQ9P2K1 1620 aa15.72■□□□□ 0.11
GNPTAB-203ENST00000549165 CECR2Q9BXF3 1484 aa15.64■□□□□ 0.09
GNPTAB-203ENST00000549165 ADRA2BP18089 450 aa15.53■□□□□ 0.08
GNPTAB-203ENST00000549165 PPP6R1Q9UPN7 881 aa15.51■□□□□ 0.07
GNPTAB-203ENST00000549165 SMARCA4P51532 1647 aa15.38■□□□□ 0.05
GNPTAB-203ENST00000549165 PIAS4Q8N2W9 510 aaPredicted RBP15.33■□□□□ 0.04
GNPTAB-203ENST00000549165 ATAD2BQ9ULI0 1458 aa15.33■□□□□ 0.04
GNPTAB-203ENST00000549165 BAZ1AQ9NRL2 1556 aaPredicted RBP15.32■□□□□ 0.04
GNPTAB-203ENST00000549165 NCAPD3P42695 1498 aa15.31■□□□□ 0.04
GNPTAB-203ENST00000549165 MROH2BQ7Z745 1585 aa15.27■□□□□ 0.03
GNPTAB-203ENST00000549165 SMARCA2P51531 1590 aa15.26■□□□□ 0.03
GNPTAB-203ENST00000549165 HMGXB3Q12766 1538 aa15.23■□□□□ 0.03
GNPTAB-203ENST00000549165 PEG3Q9GZU2 1588 aa15.21■□□□□ 0.03
GNPTAB-203ENST00000549165 BAZ1BQ9UIG0 1483 aaKnown RBP15.18■□□□□ 0.02
GNPTAB-203ENST00000549165 WIZO95785 1651 aa15.08■□□□□ 0
GNPTAB-203ENST00000549165 MSH5O43196 834 aa15.05■□□□□ -0
GNPTAB-203ENST00000549165 NESP48681 1621 aa15.05■□□□□ -0
GNPTAB-203ENST00000549165 RSF1Q96T23 1441 aaPredicted RBP15.02■□□□□ -0
GNPTAB-203ENST00000549165 ERCC6Q03468 1493 aa14.98□□□□□ -0.01
GNPTAB-203ENST00000549165 LAMC3Q9Y6N6 1575 aa14.92□□□□□ -0.02
GNPTAB-203ENST00000549165 TOP2AP11388 1531 aaKnown RBP14.91□□□□□ -0.02
GNPTAB-203ENST00000549165 CUX2O14529 1486 aa14.86□□□□□ -0.03
GNPTAB-203ENST00000549165 CADPSQ9ULU8 1353 aa14.85□□□□□ -0.03
GNPTAB-203ENST00000549165 THOC2Q8NI27 1593 aaKnown RBP14.84□□□□□ -0.03
GNPTAB-203ENST00000549165 KIF21AQ7Z4S6 1674 aa14.83□□□□□ -0.04
GNPTAB-203ENST00000549165 PDS5BQ9NTI5 1447 aa14.81□□□□□ -0.04
GNPTAB-203ENST00000549165 CFTRP13569 1480 aa14.76□□□□□ -0.05
GNPTAB-203ENST00000549165 CCDC88BA6NC98 1476 aa14.72□□□□□ -0.05
GNPTAB-203ENST00000549165 FANCD2Q9BXW9 1451 aa14.71□□□□□ -0.05
GNPTAB-203ENST00000549165 MRC2Q9UBG0 1479 aa14.71□□□□□ -0.05
GNPTAB-203ENST00000549165 CEP164Q9UPV0 1460 aa14.7□□□□□ -0.06
GNPTAB-203ENST00000549165 WDR62O43379 1518 aa14.67□□□□□ -0.06
GNPTAB-203ENST00000549165 URB2Q14146 1524 aaKnown RBP14.6□□□□□ -0.07
GNPTAB-203ENST00000549165 PRDM2Q13029 1718 aa14.58□□□□□ -0.07
GNPTAB-203ENST00000549165 SUPT5HO00267 1087 aaKnown RBP14.53□□□□□ -0.08
GNPTAB-203ENST00000549165 DNAJC5Q9H3Z4 198 aa14.53□□□□□ -0.08
GNPTAB-203ENST00000549165 TOPBP1Q92547 1522 aa14.46□□□□□ -0.09
GNPTAB-203ENST00000549165 DNMBPQ6XZF7 1577 aa14.43□□□□□ -0.1
GNPTAB-203ENST00000549165 IFT140Q96RY7 1462 aa14.38□□□□□ -0.11
GNPTAB-203ENST00000549165 ZNF608Q9ULD9 1512 aaPredicted RBP14.38□□□□□ -0.11
GNPTAB-203ENST00000549165 ABCC8Q09428 1581 aa14.37□□□□□ -0.11
GNPTAB-203ENST00000549165 SCAF1Q9H7N4 1312 aaKnown RBP14.36□□□□□ -0.11
GNPTAB-203ENST00000549165 PPP4R3CPQ6ZMV5 832 aa14.35□□□□□ -0.11
GNPTAB-203ENST00000549165 POLA1P09884 1462 aaPredicted RBP14.35□□□□□ -0.11
GNPTAB-203ENST00000549165 CUX1P39880 1505 aa14.32□□□□□ -0.12
GNPTAB-203ENST00000549165 EIF4G3O43432 1585 aaKnown RBP14.31□□□□□ -0.12
GNPTAB-203ENST00000549165 TARBP1Q13395 1621 aaKnown RBP14.31□□□□□ -0.12
GNPTAB-203ENST00000549165 FGD5Q6ZNL6 1462 aa14.3□□□□□ -0.12
GNPTAB-203ENST00000549165 RAD54L2Q9Y4B4 1467 aa14.3□□□□□ -0.12
GNPTAB-203ENST00000549165 AQRO60306 1485 aaKnown RBP eCLIP14.25□□□□□ -0.13
GNPTAB-203ENST00000549165 SOGA1O94964 1423 aa14.24□□□□□ -0.13
GNPTAB-203ENST00000549165 TDRD9Q8NDG6 1382 aaKnown RBP14.22□□□□□ -0.13
GNPTAB-203ENST00000549165 WDR97A6NE52 1622 aa14.18□□□□□ -0.14
GNPTAB-203ENST00000549165 SYNJ1O43426 1573 aa14.17□□□□□ -0.14
GNPTAB-203ENST00000549165 OSCARQ8IYS5 282 aa14.17□□□□□ -0.14
GNPTAB-203ENST00000549165 WRNQ14191 1432 aaPredicted RBP eCLIP14.16□□□□□ -0.14
GNPTAB-203ENST00000549165 SNAPC4Q5SXM2 1469 aa14.14□□□□□ -0.15
GNPTAB-203ENST00000549165 TOP2BQ02880 1626 aa14.14□□□□□ -0.15
GNPTAB-203ENST00000549165 BIVM-ERCC5R4GMW8 1640 aa14.14□□□□□ -0.15
GNPTAB-203ENST00000549165 CHD1O14646 1710 aa14.12□□□□□ -0.15
GNPTAB-203ENST00000549165 ABCA10Q8WWZ4 1543 aa14.12□□□□□ -0.15
GNPTAB-203ENST00000549165 ABCA5Q8WWZ7 1642 aa14.1□□□□□ -0.15
GNPTAB-203ENST00000549165 GRIN2BQ13224 1484 aa14.1□□□□□ -0.15
GNPTAB-203ENST00000549165 GAPVD1Q14C86 1478 aa14.08□□□□□ -0.16
GNPTAB-203ENST00000549165 MAGI1Q96QZ7 1491 aaPredicted RBP14.07□□□□□ -0.16
GNPTAB-203ENST00000549165 FBLN2P98095 1184 aa14.07□□□□□ -0.16
GNPTAB-203ENST00000549165 MAPK8IP2Q13387 824 aaPredicted RBP14.07□□□□□ -0.16
GNPTAB-203ENST00000549165 PBRM1Q86U86 1689 aa14.07□□□□□ -0.16
GNPTAB-203ENST00000549165 NCBP3Q53F19 620 aaKnown RBP14.06□□□□□ -0.16
GNPTAB-203ENST00000549165 TRIM41Q8WV44 630 aa14.04□□□□□ -0.16
GNPTAB-203ENST00000549165 RIMBP3CA6NJZ7 1639 aa14.04□□□□□ -0.16
GNPTAB-203ENST00000549165 RIMBP3BA6NNM3 1639 aa14.04□□□□□ -0.16
GNPTAB-203ENST00000549165 RIMBP3Q9UFD9 1639 aa14.04□□□□□ -0.16
GNPTAB-203ENST00000549165 SYNJ2O15056 1496 aa14.03□□□□□ -0.16
GNPTAB-203ENST00000549165 ARHGEF11O15085 1522 aa14.03□□□□□ -0.16
GNPTAB-203ENST00000549165 CLASP1Q7Z460 1538 aa14□□□□□ -0.17
GNPTAB-203ENST00000549165 CHMP7Q8WUX9 453 aaPredicted RBP13.99□□□□□ -0.17
GNPTAB-203ENST00000549165 CNKSR2Q8WXI2 1034 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 333.6 ms