RNA–Protein interactions for RNA: ENST00000548961.5

RACGAP1-216, Transcript of Rac GTPase activating protein 1, humanhuman

TSL 3 BASIC

Gene RACGAP1, Length 387 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACGAP1-216ENST00000548961 SYNJ2O15056 1496 aa11.28□□□□□ -0.6
RACGAP1-216ENST00000548961 FHAD1B1AJZ9 1412 aa11.27□□□□□ -0.6
RACGAP1-216ENST00000548961 ADAMTS12P58397 1594 aa11.27□□□□□ -0.61
RACGAP1-216ENST00000548961 RNF39Q9H2S5 420 aa11.26□□□□□ -0.61
RACGAP1-216ENST00000548961 PPP4R3CPQ6ZMV5 832 aa11.25□□□□□ -0.61
RACGAP1-216ENST00000548961 CARMIL1Q5VZK9 1371 aa11.25□□□□□ -0.61
RACGAP1-216ENST00000548961 CSRNP3Q8WYN3 585 aa11.23□□□□□ -0.61
RACGAP1-216ENST00000548961 GRIN2AQ12879 1464 aa11.23□□□□□ -0.61
RACGAP1-216ENST00000548961 CUL7Q14999 1698 aa11.23□□□□□ -0.61
RACGAP1-216ENST00000548961 DCAF8L1A6NGE4 600 aa11.22□□□□□ -0.61
RACGAP1-216ENST00000548961 EHMT2Q96KQ7 1210 aa11.21□□□□□ -0.61
RACGAP1-216ENST00000548961 EEA1Q15075 1411 aa11.18□□□□□ -0.62
RACGAP1-216ENST00000548961 CEP170Q5SW79 1584 aa11.18□□□□□ -0.62
RACGAP1-216ENST00000548961 RAPGEF2Q9Y4G8 1499 aa11.18□□□□□ -0.62
RACGAP1-216ENST00000548961 CNKSR2Q8WXI2 1034 aa11.15□□□□□ -0.62
RACGAP1-216ENST00000548961 NUP160Q12769 1436 aa11.15□□□□□ -0.62
RACGAP1-216ENST00000548961 RNF216Q9NWF9 866 aaPredicted RBP11.14□□□□□ -0.63
RACGAP1-216ENST00000548961 CLASP1Q7Z460 1538 aa11.14□□□□□ -0.63
RACGAP1-216ENST00000548961 PRXQ9BXM0 1461 aa11.13□□□□□ -0.63
RACGAP1-216ENST00000548961 JPH4Q96JJ6 628 aa11.12□□□□□ -0.63
RACGAP1-216ENST00000548961 KIAA0586Q9BVV6 1533 aa11.1□□□□□ -0.63
RACGAP1-216ENST00000548961 C1QBPQ07021 282 aaKnown RBP11.1□□□□□ -0.63
RACGAP1-216ENST00000548961 RIMBP3CA6NJZ7 1639 aa11.09□□□□□ -0.63
RACGAP1-216ENST00000548961 RIMBP3BA6NNM3 1639 aa11.09□□□□□ -0.63
RACGAP1-216ENST00000548961 RIMBP3Q9UFD9 1639 aa11.09□□□□□ -0.63
RACGAP1-216ENST00000548961 UBTFP17480 764 aaKnown RBP11.09□□□□□ -0.63
RACGAP1-216ENST00000548961 RANGAP1P46060 587 aaPredicted RBP11.09□□□□□ -0.63
RACGAP1-216ENST00000548961 ARHGEF11O15085 1522 aa11.09□□□□□ -0.63
RACGAP1-216ENST00000548961 CYB5RLQ6IPT4 315 aa11.07□□□□□ -0.64
RACGAP1-216ENST00000548961 PRG4Q92954 1404 aaPredicted RBP11.07□□□□□ -0.64
RACGAP1-216ENST00000548961 TTBK1Q5TCY1 1321 aaPredicted RBP11.07□□□□□ -0.64
RACGAP1-216ENST00000548961 KIF21BO75037 1637 aa11.06□□□□□ -0.64
RACGAP1-216ENST00000548961 CTTNBP2Q8WZ74 1663 aa11.06□□□□□ -0.64
RACGAP1-216ENST00000548961 IQGAP2Q13576 1575 aa11.06□□□□□ -0.64
RACGAP1-216ENST00000548961 ERCC6L2Q5T890 1561 aa11.06□□□□□ -0.64
RACGAP1-216ENST00000548961 SHROOM2Q13796 1616 aa11.05□□□□□ -0.64
RACGAP1-216ENST00000548961 GOLGA3Q08378 1498 aa11.04□□□□□ -0.64
RACGAP1-216ENST00000548961 P3H3Q8IVL6 736 aa11.02□□□□□ -0.65
RACGAP1-216ENST00000548961 LOC105371045A0A1W2PR82 267 aa11.01□□□□□ -0.65
RACGAP1-216ENST00000548961 ARAP1Q96P48 1450 aa11□□□□□ -0.65
RACGAP1-216ENST00000548961 CARMIL2Q6F5E8 1435 aa11□□□□□ -0.65
RACGAP1-216ENST00000548961 UGGT2Q9NYU1 1516 aa10.98□□□□□ -0.65
RACGAP1-216ENST00000548961 DISP1Q96F81 1524 aa10.97□□□□□ -0.65
RACGAP1-216ENST00000548961 PTPRGP23470 1445 aa10.95□□□□□ -0.66
RACGAP1-216ENST00000548961 TNIKQ9UKE5 1360 aa10.95□□□□□ -0.66
RACGAP1-216ENST00000548961 KIAA0556O60303 1618 aa10.94□□□□□ -0.66
RACGAP1-216ENST00000548961 NPM1P06748 294 aaKnown RBP eCLIP10.9□□□□□ -0.66
RACGAP1-216ENST00000548961 FHOD3Q2V2M9 1422 aa10.89□□□□□ -0.67
RACGAP1-216ENST00000548961 SAMD9Q5K651 1589 aa10.89□□□□□ -0.67
RACGAP1-216ENST00000548961 ARID3CA6NKF2 412 aa10.88□□□□□ -0.67
RACGAP1-216ENST00000548961 ATP1B4Q9UN42 357 aaPredicted RBP10.87□□□□□ -0.67
RACGAP1-216ENST00000548961 EFCAB5A4FU69 1503 aa10.87□□□□□ -0.67
RACGAP1-216ENST00000548961 UACAQ9BZF9 1416 aa10.86□□□□□ -0.67
RACGAP1-216ENST00000548961 ADCY10Q96PN6 1610 aa10.86□□□□□ -0.67
RACGAP1-216ENST00000548961 PLB1Q6P1J6 1458 aa10.86□□□□□ -0.67
RACGAP1-216ENST00000548961 ARHGAP35Q9NRY4 1499 aa10.86□□□□□ -0.67
RACGAP1-216ENST00000548961 CLIP1P30622 1438 aa10.85□□□□□ -0.67
RACGAP1-216ENST00000548961 CEP162Q5TB80 1403 aa10.84□□□□□ -0.67
RACGAP1-216ENST00000548961 TRHP20396 242 aaPredicted RBP10.83□□□□□ -0.68
RACGAP1-216ENST00000548961 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.82□□□□□ -0.68
RACGAP1-216ENST00000548961 HNRNPUL2Q1KMD3 747 aaKnown RBP10.82□□□□□ -0.68
RACGAP1-216ENST00000548961 ABCC2Q92887 1545 aa10.82□□□□□ -0.68
RACGAP1-216ENST00000548961 ABCA8O94911 1581 aa10.82□□□□□ -0.68
RACGAP1-216ENST00000548961 UHRF1BP1LA0JNW5 1464 aa10.81□□□□□ -0.68
RACGAP1-216ENST00000548961 RAPGEF6Q8TEU7 1601 aa10.8□□□□□ -0.68
RACGAP1-216ENST00000548961 FMN1Q68DA7 1419 aa10.79□□□□□ -0.68
RACGAP1-216ENST00000548961 ZCCHC11Q5TAX3 1644 aaKnown RBP10.78□□□□□ -0.68
RACGAP1-216ENST00000548961 KDM5BQ9UGL1 1544 aa10.77□□□□□ -0.69
RACGAP1-216ENST00000548961 ATP10BO94823 1461 aa10.76□□□□□ -0.69
RACGAP1-216ENST00000548961 KCNH8Q96L42 1107 aa10.76□□□□□ -0.69
RACGAP1-216ENST00000548961 NUP153P49790 1475 aaKnown RBP10.75□□□□□ -0.69
RACGAP1-216ENST00000548961 NCBP3Q53F19 620 aaKnown RBP10.75□□□□□ -0.69
RACGAP1-216ENST00000548961 ASXL2Q76L83 1435 aa10.75□□□□□ -0.69
RACGAP1-216ENST00000548961 FAM69CQ0P6D2 419 aa10.74□□□□□ -0.69
RACGAP1-216ENST00000548961 MAPKBP1O60336 1514 aa10.73□□□□□ -0.69
RACGAP1-216ENST00000548961 PCF11O94913 1555 aaKnown RBP10.73□□□□□ -0.69
RACGAP1-216ENST00000548961 PLEKHD1A6NEE1 506 aa10.72□□□□□ -0.69
RACGAP1-216ENST00000548961 CASKIN1Q8WXD9 1431 aa10.72□□□□□ -0.69
RACGAP1-216ENST00000548961 CDK13Q14004 1512 aaKnown RBP10.72□□□□□ -0.69
RACGAP1-216ENST00000548961 HECW1Q76N89 1606 aa10.72□□□□□ -0.69
RACGAP1-216ENST00000548961 LRRIQ1Q96JM4 1722 aa10.7□□□□□ -0.7
RACGAP1-216ENST00000548961 EPRSP07814 1512 aaKnown RBP10.7□□□□□ -0.7
RACGAP1-216ENST00000548961 ABCC10Q5T3U5 1492 aa10.69□□□□□ -0.7
RACGAP1-216ENST00000548961 FYCO1Q9BQS8 1478 aa10.69□□□□□ -0.7
RACGAP1-216ENST00000548961 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.69□□□□□ -0.7
RACGAP1-216ENST00000548961 CDK11AQ9UQ88 783 aaPredicted RBP10.69□□□□□ -0.7
RACGAP1-216ENST00000548961 KIF13AQ9H1H9 1805 aa10.69□□□□□ -0.7
RACGAP1-216ENST00000548961 WDR7Q9Y4E6 1490 aa10.68□□□□□ -0.7
RACGAP1-216ENST00000548961 VPS8Q8N3P4 1428 aa10.67□□□□□ -0.7
RACGAP1-216ENST00000548961 DIP2BQ9P265 1576 aa10.67□□□□□ -0.7
RACGAP1-216ENST00000548961 TSPOAP1O95153 1857 aa10.67□□□□□ -0.7
RACGAP1-216ENST00000548961 CCDC18Q5T9S5 1454 aa10.66□□□□□ -0.7
RACGAP1-216ENST00000548961 APLP2Q06481 763 aa10.65□□□□□ -0.7
RACGAP1-216ENST00000548961 GLI2P10070 1586 aa10.62□□□□□ -0.71
RACGAP1-216ENST00000548961 TROQ12816 1431 aaPredicted RBP10.61□□□□□ -0.71
RACGAP1-216ENST00000548961 CD109Q6YHK3 1445 aa10.61□□□□□ -0.71
RACGAP1-216ENST00000548961 MTUS2Q5JR59 1369 aa10.61□□□□□ -0.71
RACGAP1-216ENST00000548961 MAGI3Q5TCQ9 1506 aa10.6□□□□□ -0.71
RACGAP1-216ENST00000548961 MAP3K4Q9Y6R4 1608 aa10.6□□□□□ -0.71
RACGAP1-216ENST00000548961 NPM3O75607 178 aaKnown RBP10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms