RNA–Protein interactions for RNA: ENST00000548961.5

RACGAP1-216, Transcript of Rac GTPase activating protein 1, humanhuman

TSL 3 BASIC

Gene RACGAP1, Length 387 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACGAP1-216ENST00000548961 AEBP2Q6ZN18 517 aaPredicted RBP17.48■□□□□ 0.39
RACGAP1-216ENST00000548961 CHIC1Q5VXU3 224 aa16.36■□□□□ 0.21
RACGAP1-216ENST00000548961 NISCHQ9Y2I1 1504 aa16.07■□□□□ 0.16
RACGAP1-216ENST00000548961 SENP3Q9H4L4 574 aaPredicted RBP15□□□□□ -0.01
RACGAP1-216ENST00000548961 PHF23Q9BUL5 403 aaPredicted RBP14.71□□□□□ -0.05
RACGAP1-216ENST00000548961 CCDC180Q9P1Z9 1646 aa14.19□□□□□ -0.14
RACGAP1-216ENST00000548961 FOXD1Q16676 465 aa13.97□□□□□ -0.17
RACGAP1-216ENST00000548961 ABCC9O60706 1549 aa13.87□□□□□ -0.19
RACGAP1-216ENST00000548961 DCAF8L2P0C7V8 631 aa13.55□□□□□ -0.24
RACGAP1-216ENST00000548961 ZCCHC6Q5VYS8 1495 aaKnown RBP13.38□□□□□ -0.27
RACGAP1-216ENST00000548961 POTEDQ86YR6 584 aa13.37□□□□□ -0.27
RACGAP1-216ENST00000548961 RB1CC1Q8TDY2 1594 aa13.34□□□□□ -0.27
RACGAP1-216ENST00000548961 NACADO15069 1562 aa13.33□□□□□ -0.28
RACGAP1-216ENST00000548961 MSH5O43196 834 aa13.24□□□□□ -0.29
RACGAP1-216ENST00000548961 MYO15BQ96JP2 1530 aa13.23□□□□□ -0.29
RACGAP1-216ENST00000548961 DCAF1Q9Y4B6 1507 aa13.23□□□□□ -0.29
RACGAP1-216ENST00000548961 UNC13AQ9UPW8 1703 aa13.06□□□□□ -0.32
RACGAP1-216ENST00000548961 SCRIBQ14160 1630 aa13.04□□□□□ -0.32
RACGAP1-216ENST00000548961 PABPN1Q86U42 306 aaKnown RBP eCLIP13.03□□□□□ -0.32
RACGAP1-216ENST00000548961 PIAS4Q8N2W9 510 aaPredicted RBP12.96□□□□□ -0.33
RACGAP1-216ENST00000548961 BICRAQ9NZM4 1560 aa12.93□□□□□ -0.34
RACGAP1-216ENST00000548961 PLPPR3Q6T4P5 718 aa12.92□□□□□ -0.34
RACGAP1-216ENST00000548961 SHROOM4Q9ULL8 1493 aa12.9□□□□□ -0.34
RACGAP1-216ENST00000548961 DNAJC5BQ9UF47 199 aa12.82□□□□□ -0.36
RACGAP1-216ENST00000548961 PPP6R1Q9UPN7 881 aa12.81□□□□□ -0.36
RACGAP1-216ENST00000548961 ADRA2BP18089 450 aa12.73□□□□□ -0.37
RACGAP1-216ENST00000548961 EIF4G1Q04637 1599 aaKnown RBP12.58□□□□□ -0.4
RACGAP1-216ENST00000548961 CECR2Q9BXF3 1484 aa12.54□□□□□ -0.4
RACGAP1-216ENST00000548961 CC2D2AQ9P2K1 1620 aa12.52□□□□□ -0.4
RACGAP1-216ENST00000548961 SMARCA4P51532 1647 aa12.44□□□□□ -0.42
RACGAP1-216ENST00000548961 BAZ1AQ9NRL2 1556 aaPredicted RBP12.43□□□□□ -0.42
RACGAP1-216ENST00000548961 MROH2BQ7Z745 1585 aa12.41□□□□□ -0.42
RACGAP1-216ENST00000548961 ATAD2BQ9ULI0 1458 aa12.34□□□□□ -0.43
RACGAP1-216ENST00000548961 SMARCA2P51531 1590 aa12.33□□□□□ -0.44
RACGAP1-216ENST00000548961 RSF1Q96T23 1441 aaPredicted RBP12.3□□□□□ -0.44
RACGAP1-216ENST00000548961 WIZO95785 1651 aa12.3□□□□□ -0.44
RACGAP1-216ENST00000548961 NCAPD3P42695 1498 aa12.3□□□□□ -0.44
RACGAP1-216ENST00000548961 BAZ1BQ9UIG0 1483 aaKnown RBP12.27□□□□□ -0.45
RACGAP1-216ENST00000548961 PEG3Q9GZU2 1588 aa12.26□□□□□ -0.45
RACGAP1-216ENST00000548961 HMGXB3Q12766 1538 aa12.23□□□□□ -0.45
RACGAP1-216ENST00000548961 SUPT5HO00267 1087 aaKnown RBP12.21□□□□□ -0.45
RACGAP1-216ENST00000548961 TOP2AP11388 1531 aaKnown RBP12.13□□□□□ -0.47
RACGAP1-216ENST00000548961 DNAJC5Q9H3Z4 198 aa12.05□□□□□ -0.48
RACGAP1-216ENST00000548961 NESP48681 1621 aa12.04□□□□□ -0.48
RACGAP1-216ENST00000548961 CCDC88BA6NC98 1476 aa12.02□□□□□ -0.48
RACGAP1-216ENST00000548961 CADPSQ9ULU8 1353 aa11.98□□□□□ -0.49
RACGAP1-216ENST00000548961 LAMC3Q9Y6N6 1575 aa11.96□□□□□ -0.49
RACGAP1-216ENST00000548961 ERCC6Q03468 1493 aa11.95□□□□□ -0.5
RACGAP1-216ENST00000548961 CFTRP13569 1480 aa11.91□□□□□ -0.5
RACGAP1-216ENST00000548961 PDS5BQ9NTI5 1447 aa11.9□□□□□ -0.5
RACGAP1-216ENST00000548961 KIF21AQ7Z4S6 1674 aa11.87□□□□□ -0.51
RACGAP1-216ENST00000548961 FANCD2Q9BXW9 1451 aa11.85□□□□□ -0.51
RACGAP1-216ENST00000548961 DMRT2Q9Y5R5 561 aa11.85□□□□□ -0.51
RACGAP1-216ENST00000548961 PRDM2Q13029 1718 aa11.83□□□□□ -0.52
RACGAP1-216ENST00000548961 CEP164Q9UPV0 1460 aa11.82□□□□□ -0.52
RACGAP1-216ENST00000548961 MRC2Q9UBG0 1479 aa11.76□□□□□ -0.53
RACGAP1-216ENST00000548961 THOC2Q8NI27 1593 aaKnown RBP11.76□□□□□ -0.53
RACGAP1-216ENST00000548961 MAPK8IP2Q13387 824 aaPredicted RBP11.76□□□□□ -0.53
RACGAP1-216ENST00000548961 URB2Q14146 1524 aaKnown RBP11.72□□□□□ -0.53
RACGAP1-216ENST00000548961 SCAF1Q9H7N4 1312 aaKnown RBP11.71□□□□□ -0.53
RACGAP1-216ENST00000548961 CUX2O14529 1486 aa11.7□□□□□ -0.54
RACGAP1-216ENST00000548961 WDR62O43379 1518 aa11.7□□□□□ -0.54
RACGAP1-216ENST00000548961 TOPBP1Q92547 1522 aa11.67□□□□□ -0.54
RACGAP1-216ENST00000548961 ABCC8Q09428 1581 aa11.66□□□□□ -0.54
RACGAP1-216ENST00000548961 DNMBPQ6XZF7 1577 aa11.65□□□□□ -0.54
RACGAP1-216ENST00000548961 CUX1P39880 1505 aa11.63□□□□□ -0.55
RACGAP1-216ENST00000548961 WRNQ14191 1432 aaPredicted RBP eCLIP11.6□□□□□ -0.55
RACGAP1-216ENST00000548961 FGD5Q6ZNL6 1462 aa11.57□□□□□ -0.56
RACGAP1-216ENST00000548961 SOGA1O94964 1423 aa11.57□□□□□ -0.56
RACGAP1-216ENST00000548961 SYNJ1O43426 1573 aa11.57□□□□□ -0.56
RACGAP1-216ENST00000548961 POLA1P09884 1462 aaPredicted RBP11.57□□□□□ -0.56
RACGAP1-216ENST00000548961 IFT140Q96RY7 1462 aa11.56□□□□□ -0.56
RACGAP1-216ENST00000548961 RAD54L2Q9Y4B4 1467 aa11.56□□□□□ -0.56
RACGAP1-216ENST00000548961 TOP2BQ02880 1626 aa11.54□□□□□ -0.56
RACGAP1-216ENST00000548961 BIVM-ERCC5R4GMW8 1640 aa11.54□□□□□ -0.56
RACGAP1-216ENST00000548961 ZNF608Q9ULD9 1512 aaPredicted RBP11.52□□□□□ -0.57
RACGAP1-216ENST00000548961 TARBP1Q13395 1621 aaKnown RBP11.52□□□□□ -0.57
RACGAP1-216ENST00000548961 TDRD9Q8NDG6 1382 aaKnown RBP11.51□□□□□ -0.57
RACGAP1-216ENST00000548961 TRIM41Q8WV44 630 aa11.5□□□□□ -0.57
RACGAP1-216ENST00000548961 AQRO60306 1485 aaKnown RBP eCLIP11.5□□□□□ -0.571e-9■■■■■ 32.4
RACGAP1-216ENST00000548961 EIF4G3O43432 1585 aaKnown RBP11.45□□□□□ -0.58
RACGAP1-216ENST00000548961 CACNB1Q02641 598 aaPredicted RBP11.45□□□□□ -0.58
RACGAP1-216ENST00000548961 ABCA10Q8WWZ4 1543 aa11.44□□□□□ -0.58
RACGAP1-216ENST00000548961 WDR97A6NE52 1622 aa11.43□□□□□ -0.58
RACGAP1-216ENST00000548961 GAPVD1Q14C86 1478 aa11.42□□□□□ -0.58
RACGAP1-216ENST00000548961 FBLN2P98095 1184 aa11.41□□□□□ -0.58
RACGAP1-216ENST00000548961 ABCA5Q8WWZ7 1642 aa11.38□□□□□ -0.59
RACGAP1-216ENST00000548961 GRIN2BQ13224 1484 aa11.38□□□□□ -0.59
RACGAP1-216ENST00000548961 PBRM1Q86U86 1689 aa11.38□□□□□ -0.59
RACGAP1-216ENST00000548961 SNAPC4Q5SXM2 1469 aa11.37□□□□□ -0.59
RACGAP1-216ENST00000548961 KIF27Q86VH2 1401 aa11.35□□□□□ -0.59
RACGAP1-216ENST00000548961 CHMP7Q8WUX9 453 aaPredicted RBP11.35□□□□□ -0.59
RACGAP1-216ENST00000548961 OSCARQ8IYS5 282 aa11.33□□□□□ -0.6
RACGAP1-216ENST00000548961 RUSC2Q8N2Y8 1516 aa11.33□□□□□ -0.6
RACGAP1-216ENST00000548961 MAGI1Q96QZ7 1491 aaPredicted RBP11.32□□□□□ -0.6
RACGAP1-216ENST00000548961 HOXD11P31277 338 aaPredicted RBP11.32□□□□□ -0.6
RACGAP1-216ENST00000548961 CHD1O14646 1710 aa11.32□□□□□ -0.6
RACGAP1-216ENST00000548961 FAM9AQ8IZU1 332 aaPredicted RBP11.31□□□□□ -0.6
RACGAP1-216ENST00000548961 IGF1RP08069 1367 aa11.3□□□□□ -0.6
RACGAP1-216ENST00000548961 ERICH3Q5RHP9 1530 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 94.3 ms