RNA–Protein interactions for RNA: ENST00000548522.5

SSH1-208, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 602 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-208ENST00000548522 KIF13AQ9H1H9 1805 aa29.2■■■□□ 2.27
SSH1-208ENST00000548522 IGF1RP08069 1367 aa29.13■■■□□ 2.25
SSH1-208ENST00000548522 ADCY10Q96PN6 1610 aa29.09■■■□□ 2.25
SSH1-208ENST00000548522 KIF27Q86VH2 1401 aa29.08■■■□□ 2.25
SSH1-208ENST00000548522 KIAA0586Q9BVV6 1533 aa29.08■■■□□ 2.25
SSH1-208ENST00000548522 ABCC10Q5T3U5 1492 aa29.06■■■□□ 2.24
SSH1-208ENST00000548522 CUL7Q14999 1698 aa29.05■■■□□ 2.24
SSH1-208ENST00000548522 MAPKBP1O60336 1514 aa29.04■■■□□ 2.24
SSH1-208ENST00000548522 FAM69CQ0P6D2 419 aa29.03■■■□□ 2.24
SSH1-208ENST00000548522 DIP2BQ9P265 1576 aa29.01■■■□□ 2.24
SSH1-208ENST00000548522 NPM1P06748 294 aaKnown RBP eCLIP28.98■■■□□ 2.23
SSH1-208ENST00000548522 CARMIL1Q5VZK9 1371 aa28.91■■■□□ 2.22
SSH1-208ENST00000548522 TTBK1Q5TCY1 1321 aaPredicted RBP28.87■■■□□ 2.21
SSH1-208ENST00000548522 PTPRGP23470 1445 aa28.86■■■□□ 2.21
SSH1-208ENST00000548522 KDM6BO15054 1643 aa28.79■■■□□ 2.2
SSH1-208ENST00000548522 IQGAP2Q13576 1575 aa28.79■■■□□ 2.2
SSH1-208ENST00000548522 TNIKQ9UKE5 1360 aa28.78■■■□□ 2.2
SSH1-208ENST00000548522 TSPOAP1O95153 1857 aa28.76■■■□□ 2.2
SSH1-208ENST00000548522 CARMIL2Q6F5E8 1435 aa28.76■■■□□ 2.19
SSH1-208ENST00000548522 ABCC2Q92887 1545 aa28.75■■■□□ 2.19
SSH1-208ENST00000548522 DISP1Q96F81 1524 aa28.72■■■□□ 2.19
SSH1-208ENST00000548522 ASXL2Q76L83 1435 aa28.69■■■□□ 2.18
SSH1-208ENST00000548522 UHRF1BP1LA0JNW5 1464 aa28.65■■■□□ 2.18
SSH1-208ENST00000548522 UACAQ9BZF9 1416 aa28.63■■■□□ 2.17
SSH1-208ENST00000548522 KDM4FA0A1W2PPD8 638 aa28.63■■■□□ 2.17
SSH1-208ENST00000548522 PLB1Q6P1J6 1458 aa28.62■■■□□ 2.17
SSH1-208ENST00000548522 RAPGEF2Q9Y4G8 1499 aa28.62■■■□□ 2.17
SSH1-208ENST00000548522 PPRC1Q5VV67 1664 aaKnown RBP28.61■■■□□ 2.17
SSH1-208ENST00000548522 UGGT2Q9NYU1 1516 aa28.6■■■□□ 2.17
SSH1-208ENST00000548522 GLI2P10070 1586 aa28.59■■■□□ 2.17
SSH1-208ENST00000548522 KIAA0556O60303 1618 aa28.56■■■□□ 2.16
SSH1-208ENST00000548522 KDM5BQ9UGL1 1544 aa28.54■■■□□ 2.16
SSH1-208ENST00000548522 EPRSP07814 1512 aaKnown RBP28.52■■■□□ 2.16
SSH1-208ENST00000548522 ZCCHC11Q5TAX3 1644 aaKnown RBP28.5■■■□□ 2.15
SSH1-208ENST00000548522 COL17A1Q9UMD9 1497 aaPredicted RBP28.48■■■□□ 2.15
SSH1-208ENST00000548522 MAP3K4Q9Y6R4 1608 aa28.46■■■□□ 2.15
SSH1-208ENST00000548522 CTTNBP2Q8WZ74 1663 aa28.38■■■□□ 2.13
SSH1-208ENST00000548522 WDR7Q9Y4E6 1490 aa28.37■■■□□ 2.13
SSH1-208ENST00000548522 ADGRL1O94910 1474 aa28.36■■■□□ 2.13
SSH1-208ENST00000548522 TEX14Q8IWB6 1497 aa28.34■■■□□ 2.13
SSH1-208ENST00000548522 PRXQ9BXM0 1461 aa28.31■■■□□ 2.12
SSH1-208ENST00000548522 ABCA8O94911 1581 aa28.31■■■□□ 2.12
SSH1-208ENST00000548522 GOLGA3Q08378 1498 aa28.28■■■□□ 2.12
SSH1-208ENST00000548522 CD109Q6YHK3 1445 aa28.19■■■□□ 2.1
SSH1-208ENST00000548522 KCNH8Q96L42 1107 aa28.19■■■□□ 2.1
SSH1-208ENST00000548522 MAGI3Q5TCQ9 1506 aa28.18■■■□□ 2.1
SSH1-208ENST00000548522 CFAP43Q8NDM7 1665 aa28.16■■■□□ 2.1
SSH1-208ENST00000548522 ARID3CA6NKF2 412 aa28.15■■■□□ 2.1
SSH1-208ENST00000548522 P3H3Q8IVL6 736 aa28.12■■■□□ 2.09
SSH1-208ENST00000548522 ATP10BO94823 1461 aa28.07■■■□□ 2.08
SSH1-208ENST00000548522 HECW2Q9P2P5 1572 aa28.04■■■□□ 2.08
SSH1-208ENST00000548522 SAMD9Q5K651 1589 aa28.02■■■□□ 2.08
SSH1-208ENST00000548522 KIF21BO75037 1637 aa27.99■■■□□ 2.07
SSH1-208ENST00000548522 ILDR1Q86SU0 546 aaPredicted RBP27.97■■■□□ 2.07
SSH1-208ENST00000548522 CSRNP3Q8WYN3 585 aa27.97■■■□□ 2.07
SSH1-208ENST00000548522 ARAP3Q8WWN8 1544 aa27.96■■■□□ 2.07
SSH1-208ENST00000548522 ABCA9Q8IUA7 1624 aa27.94■■■□□ 2.06
SSH1-208ENST00000548522 RAPGEF6Q8TEU7 1601 aa27.93■■■□□ 2.06
SSH1-208ENST00000548522 NUP153P49790 1475 aaKnown RBP27.89■■■□□ 2.05
SSH1-208ENST00000548522 RANGAP1P46060 587 aaPredicted RBP27.88■■■□□ 2.05
SSH1-208ENST00000548522 FHOD3Q2V2M9 1422 aa27.87■■■□□ 2.05
SSH1-208ENST00000548522 FAM9AQ8IZU1 332 aaPredicted RBP27.86■■■□□ 2.05
SSH1-208ENST00000548522 RAPGEF3O95398 923 aa27.84■■■□□ 2.05
SSH1-208ENST00000548522 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.83■■■□□ 2.05
SSH1-208ENST00000548522 HNRNPUL2Q1KMD3 747 aaKnown RBP27.83■■■□□ 2.05
SSH1-208ENST00000548522 FRMPD1Q5SYB0 1578 aa27.82■■■□□ 2.04
SSH1-208ENST00000548522 NEO1Q92859 1461 aa27.8■■■□□ 2.04
SSH1-208ENST00000548522 EEA1Q15075 1411 aa27.78■■■□□ 2.04
SSH1-208ENST00000548522 PHLDB1Q86UU1 1377 aa27.78■■■□□ 2.04
SSH1-208ENST00000548522 ADAMTSL3P82987 1691 aa27.73■■■□□ 2.03
SSH1-208ENST00000548522 PTPRMP28827 1452 aa27.72■■■□□ 2.03
SSH1-208ENST00000548522 EFCAB5A4FU69 1503 aa27.66■■■□□ 2.02
SSH1-208ENST00000548522 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.65■■■□□ 2.02
SSH1-208ENST00000548522 ARHGEF40Q8TER5 1519 aa27.65■■■□□ 2.02
SSH1-208ENST00000548522 TTC37Q6PGP7 1564 aa27.65■■■□□ 2.02
SSH1-208ENST00000548522 BCORL1Q5H9F3 1711 aa27.64■■■□□ 2.02
SSH1-208ENST00000548522 MADDQ8WXG6 1647 aa27.64■■■□□ 2.02
SSH1-208ENST00000548522 PLEKHD1A6NEE1 506 aa27.63■■■□□ 2.01
SSH1-208ENST00000548522 CDK13Q14004 1512 aaKnown RBP27.62■■■□□ 2.01
SSH1-208ENST00000548522 FANCAO15360 1455 aa27.62■■■□□ 2.01
SSH1-208ENST00000548522 DENND4BO75064 1496 aaPredicted RBP27.62■■■□□ 2.01
SSH1-208ENST00000548522 ARID4BQ4LE39 1312 aaPredicted RBP27.62■■■□□ 2.01
SSH1-208ENST00000548522 RICTORQ6R327 1708 aa27.61■■■□□ 2.01
SSH1-208ENST00000548522 AKNAQ7Z591 1439 aa27.61■■■□□ 2.01
SSH1-208ENST00000548522 EHMT2Q96KQ7 1210 aa27.56■■■□□ 2
SSH1-208ENST00000548522 CFAP74Q9C0B2 1584 aa27.55■■■□□ 2
SSH1-208ENST00000548522 YEATS2Q9ULM3 1422 aa27.53■■■□□ 2
SSH1-208ENST00000548522 SIGLEC1Q9BZZ2 1709 aa27.53■■■□□ 2
SSH1-208ENST00000548522 ZMYM4Q5VZL5 1548 aa27.52■■■□□ 2
SSH1-208ENST00000548522 PCF11O94913 1555 aaKnown RBP27.52■■■□□ 2
SSH1-208ENST00000548522 RIMS1Q86UR5 1692 aaKnown RBP27.51■■□□□ 1.99
SSH1-208ENST00000548522 LMTK3Q96Q04 1460 aa27.51■■□□□ 1.99
SSH1-208ENST00000548522 ZFYVE16Q7Z3T8 1539 aa27.48■■□□□ 1.99
SSH1-208ENST00000548522 HECW1Q76N89 1606 aa27.45■■□□□ 1.98
SSH1-208ENST00000548522 ARHGAP35Q9NRY4 1499 aa27.44■■□□□ 1.98
SSH1-208ENST00000548522 PLCH2O75038 1416 aa27.43■■□□□ 1.98
SSH1-208ENST00000548522 POGZQ7Z3K3 1410 aa27.43■■□□□ 1.98
SSH1-208ENST00000548522 UBTFP17480 764 aaKnown RBP27.42■■□□□ 1.98
SSH1-208ENST00000548522 SCAPERQ9BY12 1400 aa27.41■■□□□ 1.98
SSH1-208ENST00000548522 PLPPR3Q6T4P5 718 aa27.41■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms