RNA–Protein interactions for RNA: ENST00000548032.6

SEC23A-204, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 2 BASIC

Gene SEC23A, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-204ENST00000548032 SHROOM2Q13796 1616 aa24.64■■□□□ 1.54
SEC23A-204ENST00000548032 RUSC2Q8N2Y8 1516 aa24.63■■□□□ 1.53
SEC23A-204ENST00000548032 PRG4Q92954 1404 aaPredicted RBP24.62■■□□□ 1.53
SEC23A-204ENST00000548032 KIAA0586Q9BVV6 1533 aa24.57■■□□□ 1.52
SEC23A-204ENST00000548032 RAPGEF2Q9Y4G8 1499 aa24.5■■□□□ 1.51
SEC23A-204ENST00000548032 IQGAP2Q13576 1575 aa24.39■■□□□ 1.5
SEC23A-204ENST00000548032 TTBK1Q5TCY1 1321 aaPredicted RBP24.37■■□□□ 1.49
SEC23A-204ENST00000548032 CARMIL2Q6F5E8 1435 aa24.35■■□□□ 1.49
SEC23A-204ENST00000548032 PRXQ9BXM0 1461 aa24.33■■□□□ 1.49
SEC23A-204ENST00000548032 CSRNP3Q8WYN3 585 aa24.32■■□□□ 1.48
SEC23A-204ENST00000548032 PTPRGP23470 1445 aa24.3■■□□□ 1.48
SEC23A-204ENST00000548032 TNIKQ9UKE5 1360 aa24.29■■□□□ 1.48
SEC23A-204ENST00000548032 NPM1P06748 294 aaKnown RBP eCLIP24.28■■□□□ 1.48
SEC23A-204ENST00000548032 FAM9AQ8IZU1 332 aaPredicted RBP24.28■■□□□ 1.48
SEC23A-204ENST00000548032 CHIC1Q5VXU3 224 aa24.27■■□□□ 1.48
SEC23A-204ENST00000548032 AEBP2Q6ZN18 517 aaPredicted RBP24.27■■□□□ 1.48
SEC23A-204ENST00000548032 EEA1Q15075 1411 aa24.25■■□□□ 1.47
SEC23A-204ENST00000548032 DISP1Q96F81 1524 aa24.25■■□□□ 1.47
SEC23A-204ENST00000548032 UGGT2Q9NYU1 1516 aa24.25■■□□□ 1.47
SEC23A-204ENST00000548032 ADCY10Q96PN6 1610 aa24.23■■□□□ 1.47
SEC23A-204ENST00000548032 CTTNBP2Q8WZ74 1663 aa24.21■■□□□ 1.47
SEC23A-204ENST00000548032 KIAA0556O60303 1618 aa24.17■■□□□ 1.46
SEC23A-204ENST00000548032 FAM69CQ0P6D2 419 aa24.15■■□□□ 1.46
SEC23A-204ENST00000548032 GOLGA3Q08378 1498 aa24.12■■□□□ 1.45
SEC23A-204ENST00000548032 UACAQ9BZF9 1416 aa24.11■■□□□ 1.45
SEC23A-204ENST00000548032 KIF13AQ9H1H9 1805 aa24.1■■□□□ 1.45
SEC23A-204ENST00000548032 MAPKBP1O60336 1514 aa24.1■■□□□ 1.45
SEC23A-204ENST00000548032 ABCC10Q5T3U5 1492 aa24.09■■□□□ 1.45
SEC23A-204ENST00000548032 ABCC2Q92887 1545 aa24.07■■□□□ 1.44
SEC23A-204ENST00000548032 UHRF1BP1LA0JNW5 1464 aa24.06■■□□□ 1.44
SEC23A-204ENST00000548032 P3H3Q8IVL6 736 aa24.05■■□□□ 1.44
SEC23A-204ENST00000548032 RANGAP1P46060 587 aaPredicted RBP24.04■■□□□ 1.44
SEC23A-204ENST00000548032 EHMT2Q96KQ7 1210 aa24.04■■□□□ 1.44
SEC23A-204ENST00000548032 PLB1Q6P1J6 1458 aa24■■□□□ 1.43
SEC23A-204ENST00000548032 KIF21BO75037 1637 aa23.99■■□□□ 1.43
SEC23A-204ENST00000548032 DIP2BQ9P265 1576 aa23.99■■□□□ 1.43
SEC23A-204ENST00000548032 ASXL2Q76L83 1435 aa23.98■■□□□ 1.43
SEC23A-204ENST00000548032 KDM5BQ9UGL1 1544 aa23.95■■□□□ 1.43
SEC23A-204ENST00000548032 UBTFP17480 764 aaKnown RBP23.93■■□□□ 1.42
SEC23A-204ENST00000548032 ABCA8O94911 1581 aa23.91■■□□□ 1.42
SEC23A-204ENST00000548032 SAMD9Q5K651 1589 aa23.91■■□□□ 1.42
SEC23A-204ENST00000548032 ZCCHC11Q5TAX3 1644 aaKnown RBP23.9■■□□□ 1.42
SEC23A-204ENST00000548032 ARID3CA6NKF2 412 aa23.87■■□□□ 1.41
SEC23A-204ENST00000548032 FHOD3Q2V2M9 1422 aa23.85■■□□□ 1.41
SEC23A-204ENST00000548032 EPRSP07814 1512 aaKnown RBP23.81■■□□□ 1.4
SEC23A-204ENST00000548032 WDR7Q9Y4E6 1490 aa23.81■■□□□ 1.4
SEC23A-204ENST00000548032 KDM6BO15054 1643 aa23.8■■□□□ 1.4
SEC23A-204ENST00000548032 TSPOAP1O95153 1857 aa23.79■■□□□ 1.4
SEC23A-204ENST00000548032 GLI2P10070 1586 aa23.78■■□□□ 1.4
SEC23A-204ENST00000548032 EFCAB5A4FU69 1503 aa23.78■■□□□ 1.4
SEC23A-204ENST00000548032 KCNH8Q96L42 1107 aa23.77■■□□□ 1.4
SEC23A-204ENST00000548032 ATP10BO94823 1461 aa23.75■■□□□ 1.39
SEC23A-204ENST00000548032 RAPGEF6Q8TEU7 1601 aa23.74■■□□□ 1.39
SEC23A-204ENST00000548032 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.74■■□□□ 1.39
SEC23A-204ENST00000548032 HNRNPUL2Q1KMD3 747 aaKnown RBP23.74■■□□□ 1.39
SEC23A-204ENST00000548032 KDM4FA0A1W2PPD8 638 aa23.7■■□□□ 1.38
SEC23A-204ENST00000548032 NUP153P49790 1475 aaKnown RBP23.68■■□□□ 1.38
SEC23A-204ENST00000548032 MAP3K4Q9Y6R4 1608 aa23.67■■□□□ 1.38
SEC23A-204ENST00000548032 PPRC1Q5VV67 1664 aaKnown RBP23.66■■□□□ 1.38
SEC23A-204ENST00000548032 ARHGAP35Q9NRY4 1499 aa23.65■■□□□ 1.38
SEC23A-204ENST00000548032 TEX14Q8IWB6 1497 aa23.62■■□□□ 1.37
SEC23A-204ENST00000548032 CD109Q6YHK3 1445 aa23.62■■□□□ 1.37
SEC23A-204ENST00000548032 ATP1B4Q9UN42 357 aaPredicted RBP23.62■■□□□ 1.37
SEC23A-204ENST00000548032 FMN1Q68DA7 1419 aa23.59■■□□□ 1.37
SEC23A-204ENST00000548032 COL17A1Q9UMD9 1497 aaPredicted RBP23.57■■□□□ 1.36
SEC23A-204ENST00000548032 PLEKHD1A6NEE1 506 aa23.56■■□□□ 1.36
SEC23A-204ENST00000548032 CFAP43Q8NDM7 1665 aa23.56■■□□□ 1.36
SEC23A-204ENST00000548032 MAGI3Q5TCQ9 1506 aa23.54■■□□□ 1.36
SEC23A-204ENST00000548032 CDK13Q14004 1512 aaKnown RBP23.53■■□□□ 1.36
SEC23A-204ENST00000548032 HECW1Q76N89 1606 aa23.48■■□□□ 1.35
SEC23A-204ENST00000548032 ABCA9Q8IUA7 1624 aa23.48■■□□□ 1.35
SEC23A-204ENST00000548032 CLIP1P30622 1438 aa23.47■■□□□ 1.35
SEC23A-204ENST00000548032 ADGRL1O94910 1474 aa23.44■■□□□ 1.34
SEC23A-204ENST00000548032 CDK11AQ9UQ88 783 aaPredicted RBP23.4■■□□□ 1.34
SEC23A-204ENST00000548032 CASKIN1Q8WXD9 1431 aa23.38■■□□□ 1.33
SEC23A-204ENST00000548032 PCF11O94913 1555 aaKnown RBP23.37■■□□□ 1.33
SEC23A-204ENST00000548032 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.37■■□□□ 1.33
SEC23A-204ENST00000548032 PHLDB1Q86UU1 1377 aa23.34■■□□□ 1.33
SEC23A-204ENST00000548032 NEO1Q92859 1461 aa23.34■■□□□ 1.33
SEC23A-204ENST00000548032 TTC37Q6PGP7 1564 aa23.34■■□□□ 1.33
SEC23A-204ENST00000548032 ARAP3Q8WWN8 1544 aa23.33■■□□□ 1.33
SEC23A-204ENST00000548032 LOC105371045A0A1W2PR82 267 aa23.33■■□□□ 1.33
SEC23A-204ENST00000548032 TROQ12816 1431 aaPredicted RBP23.31■■□□□ 1.32
SEC23A-204ENST00000548032 CEP162Q5TB80 1403 aa23.31■■□□□ 1.32
SEC23A-204ENST00000548032 CCDC18Q5T9S5 1454 aa23.3■■□□□ 1.32
SEC23A-204ENST00000548032 FYCO1Q9BQS8 1478 aa23.3■■□□□ 1.32
SEC23A-204ENST00000548032 RAPGEF3O95398 923 aa23.3■■□□□ 1.32
SEC23A-204ENST00000548032 LRRIQ1Q96JM4 1722 aa23.3■■□□□ 1.32
SEC23A-204ENST00000548032 FANCAO15360 1455 aa23.29■■□□□ 1.32
SEC23A-204ENST00000548032 AKNAQ7Z591 1439 aa23.26■■□□□ 1.31
SEC23A-204ENST00000548032 KIF14Q15058 1648 aa23.26■■□□□ 1.31
SEC23A-204ENST00000548032 PLCH2O75038 1416 aa23.25■■□□□ 1.31
SEC23A-204ENST00000548032 CFAP74Q9C0B2 1584 aa23.23■■□□□ 1.31
SEC23A-204ENST00000548032 DENND4BO75064 1496 aaPredicted RBP23.21■■□□□ 1.31
SEC23A-204ENST00000548032 EFCAB2Q5VUJ9 269 aa23.19■■□□□ 1.3
SEC23A-204ENST00000548032 FRMPD1Q5SYB0 1578 aa23.18■■□□□ 1.3
SEC23A-204ENST00000548032 MYO5CQ9NQX4 1742 aa23.16■■□□□ 1.3
SEC23A-204ENST00000548032 ARHGAP5Q13017 1502 aa23.15■■□□□ 1.3
SEC23A-204ENST00000548032 SCAPERQ9BY12 1400 aa23.15■■□□□ 1.3
SEC23A-204ENST00000548032 HECW2Q9P2P5 1572 aa23.12■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms