RNA–Protein interactions for RNA: ENST00000547555.5

LETMD1-210, Transcript of LETM1 domain containing 1, humanhuman

TSL 5

Gene LETMD1, Length 1,658 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-210ENST00000547555 FBLN2P98095 1184 aa26.44■■□□□ 1.82
LETMD1-210ENST00000547555 NUP160Q12769 1436 aa26.41■■□□□ 1.82
LETMD1-210ENST00000547555 CEP170Q5SW79 1584 aa26.4■■□□□ 1.82
LETMD1-210ENST00000547555 CLASP1Q7Z460 1538 aa26.35■■□□□ 1.81
LETMD1-210ENST00000547555 OSCARQ8IYS5 282 aa26.34■■□□□ 1.81
LETMD1-210ENST00000547555 CTTNBP2Q8WZ74 1663 aa26.29■■□□□ 1.8
LETMD1-210ENST00000547555 GOLGA3Q08378 1498 aa26.29■■□□□ 1.8
LETMD1-210ENST00000547555 KIAA0586Q9BVV6 1533 aa26.26■■□□□ 1.79
LETMD1-210ENST00000547555 MYT1Q01538 1121 aa26.22■■□□□ 1.79
LETMD1-210ENST00000547555 IQGAP2Q13576 1575 aa26.21■■□□□ 1.79
LETMD1-210ENST00000547555 SHROOM2Q13796 1616 aa26.2■■□□□ 1.78
LETMD1-210ENST00000547555 UGGT2Q9NYU1 1516 aa26.09■■□□□ 1.77
LETMD1-210ENST00000547555 SCAF1Q9H7N4 1312 aaKnown RBP26.08■■□□□ 1.76
LETMD1-210ENST00000547555 EHMT2Q96KQ7 1210 aa26.07■■□□□ 1.76
LETMD1-210ENST00000547555 UBTFP17480 764 aaKnown RBP26.06■■□□□ 1.76
LETMD1-210ENST00000547555 JPH4Q96JJ6 628 aa26.06■■□□□ 1.76
LETMD1-210ENST00000547555 TNIKQ9UKE5 1360 aa26.03■■□□□ 1.76
LETMD1-210ENST00000547555 ARHGEF11O15085 1522 aa26■■□□□ 1.75
LETMD1-210ENST00000547555 PRG4Q92954 1404 aaPredicted RBP26■■□□□ 1.75
LETMD1-210ENST00000547555 DNAJC5Q9H3Z4 198 aa25.99■■□□□ 1.75
LETMD1-210ENST00000547555 ERCC6L2Q5T890 1561 aa25.99■■□□□ 1.75
LETMD1-210ENST00000547555 DISP1Q96F81 1524 aa25.98■■□□□ 1.75
LETMD1-210ENST00000547555 RIMBP3CA6NJZ7 1639 aa25.97■■□□□ 1.75
LETMD1-210ENST00000547555 RIMBP3BA6NNM3 1639 aa25.97■■□□□ 1.75
LETMD1-210ENST00000547555 RIMBP3Q9UFD9 1639 aa25.97■■□□□ 1.75
LETMD1-210ENST00000547555 SAMD9Q5K651 1589 aa25.97■■□□□ 1.75
LETMD1-210ENST00000547555 KIAA0556O60303 1618 aa25.96■■□□□ 1.75
LETMD1-210ENST00000547555 CARMIL2Q6F5E8 1435 aa25.92■■□□□ 1.74
LETMD1-210ENST00000547555 EFCAB5A4FU69 1503 aa25.92■■□□□ 1.74
LETMD1-210ENST00000547555 ACIN1Q9UKV3 1341 aaKnown RBP25.89■■□□□ 1.74
LETMD1-210ENST00000547555 CENPBP07199 599 aaPredicted RBP25.84■■□□□ 1.73
LETMD1-210ENST00000547555 ARAP1Q96P48 1450 aa25.83■■□□□ 1.73
LETMD1-210ENST00000547555 ARHGAP35Q9NRY4 1499 aa25.83■■□□□ 1.73
LETMD1-210ENST00000547555 CEP162Q5TB80 1403 aa25.81■■□□□ 1.72
LETMD1-210ENST00000547555 CLIP1P30622 1438 aa25.8■■□□□ 1.72
LETMD1-210ENST00000547555 RANGAP1P46060 587 aaPredicted RBP25.78■■□□□ 1.72
LETMD1-210ENST00000547555 FHOD3Q2V2M9 1422 aa25.74■■□□□ 1.71
LETMD1-210ENST00000547555 PTPRGP23470 1445 aa25.73■■□□□ 1.71
LETMD1-210ENST00000547555 P3H3Q8IVL6 736 aa25.71■■□□□ 1.71
LETMD1-210ENST00000547555 CCER1Q8TC90 406 aaPredicted RBP25.68■■□□□ 1.7
LETMD1-210ENST00000547555 ABCA8O94911 1581 aa25.65■■□□□ 1.7
LETMD1-210ENST00000547555 FMN1Q68DA7 1419 aa25.63■■□□□ 1.69
LETMD1-210ENST00000547555 CYB5RLQ6IPT4 315 aa25.62■■□□□ 1.69
LETMD1-210ENST00000547555 ADCY10Q96PN6 1610 aa25.61■■□□□ 1.69
LETMD1-210ENST00000547555 PLB1Q6P1J6 1458 aa25.61■■□□□ 1.69
LETMD1-210ENST00000547555 UHRF1BP1LA0JNW5 1464 aa25.6■■□□□ 1.69
LETMD1-210ENST00000547555 UACAQ9BZF9 1416 aa25.6■■□□□ 1.69
LETMD1-210ENST00000547555 DIEXFQ68CQ4 756 aaKnown RBP25.6■■□□□ 1.69
LETMD1-210ENST00000547555 RAPGEF6Q8TEU7 1601 aa25.59■■□□□ 1.69
LETMD1-210ENST00000547555 ABCC2Q92887 1545 aa25.59■■□□□ 1.69
LETMD1-210ENST00000547555 TTBK1Q5TCY1 1321 aaPredicted RBP25.59■■□□□ 1.69
LETMD1-210ENST00000547555 NEUROD1Q13562 356 aa25.53■■□□□ 1.68
LETMD1-210ENST00000547555 PCF11O94913 1555 aaKnown RBP25.53■■□□□ 1.68
LETMD1-210ENST00000547555 HECW1Q76N89 1606 aa25.49■■□□□ 1.67
LETMD1-210ENST00000547555 VPS8Q8N3P4 1428 aa25.49■■□□□ 1.67
LETMD1-210ENST00000547555 CASKIN1Q8WXD9 1431 aa25.49■■□□□ 1.67
LETMD1-210ENST00000547555 NUP153P49790 1475 aaKnown RBP25.48■■□□□ 1.67
LETMD1-210ENST00000547555 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.48■■□□□ 1.67
LETMD1-210ENST00000547555 FYCO1Q9BQS8 1478 aa25.48■■□□□ 1.67
LETMD1-210ENST00000547555 KDM5BQ9UGL1 1544 aa25.48■■□□□ 1.67
LETMD1-210ENST00000547555 ZCCHC11Q5TAX3 1644 aaKnown RBP25.44■■□□□ 1.66
LETMD1-210ENST00000547555 LRRIQ1Q96JM4 1722 aa25.44■■□□□ 1.66
LETMD1-210ENST00000547555 ATP10BO94823 1461 aa25.39■■□□□ 1.66
LETMD1-210ENST00000547555 GTF3C3Q9Y5Q9 886 aa25.39■■□□□ 1.65
LETMD1-210ENST00000547555 EPRSP07814 1512 aaKnown RBP25.38■■□□□ 1.65
LETMD1-210ENST00000547555 ZNF316A6NFI3 1004 aaPredicted RBP25.37■■□□□ 1.65
LETMD1-210ENST00000547555 MAPKBP1O60336 1514 aa25.36■■□□□ 1.65
LETMD1-210ENST00000547555 CCDC18Q5T9S5 1454 aa25.35■■□□□ 1.65
LETMD1-210ENST00000547555 CDK13Q14004 1512 aaKnown RBP25.34■■□□□ 1.65
LETMD1-210ENST00000547555 NPM1P06748 294 aaKnown RBP eCLIP25.32■■□□□ 1.64
LETMD1-210ENST00000547555 CLSPNQ9HAW4 1339 aa25.31■■□□□ 1.64
LETMD1-210ENST00000547555 CFAP43Q8NDM7 1665 aa25.29■■□□□ 1.64
LETMD1-210ENST00000547555 ATP1B4Q9UN42 357 aaPredicted RBP25.28■■□□□ 1.64
LETMD1-210ENST00000547555 ARID3CA6NKF2 412 aa25.27■■□□□ 1.64
LETMD1-210ENST00000547555 ASXL2Q76L83 1435 aa25.26■■□□□ 1.63
LETMD1-210ENST00000547555 MAP3K1Q13233 1512 aa25.25■■□□□ 1.63
LETMD1-210ENST00000547555 TIAM1Q13009 1591 aa25.24■■□□□ 1.63
LETMD1-210ENST00000547555 WDR7Q9Y4E6 1490 aa25.23■■□□□ 1.63
LETMD1-210ENST00000547555 MAGI3Q5TCQ9 1506 aa25.19■■□□□ 1.62
LETMD1-210ENST00000547555 HNRNPUL2Q1KMD3 747 aaKnown RBP25.19■■□□□ 1.62
LETMD1-210ENST00000547555 DIP2BQ9P265 1576 aa25.15■■□□□ 1.62
LETMD1-210ENST00000547555 TROQ12816 1431 aaPredicted RBP25.15■■□□□ 1.62
LETMD1-210ENST00000547555 CDK11AQ9UQ88 783 aaPredicted RBP25.15■■□□□ 1.62
LETMD1-210ENST00000547555 ABCC10Q5T3U5 1492 aa25.14■■□□□ 1.62
LETMD1-210ENST00000547555 PLEKHD1A6NEE1 506 aa25.13■■□□□ 1.61
LETMD1-210ENST00000547555 KIF13AQ9H1H9 1805 aa25.13■■□□□ 1.61
LETMD1-210ENST00000547555 EHBP1L1Q8N3D4 1523 aa25.13■■□□□ 1.61
LETMD1-210ENST00000547555 GLI2P10070 1586 aa25.11■■□□□ 1.61
LETMD1-210ENST00000547555 LRRC9Q6ZRR7 1453 aa25.1■■□□□ 1.61
LETMD1-210ENST00000547555 KIF14Q15058 1648 aa25.08■■□□□ 1.61
LETMD1-210ENST00000547555 MTUS2Q5JR59 1369 aa25.07■■□□□ 1.6
LETMD1-210ENST00000547555 ABCA9Q8IUA7 1624 aa25.07■■□□□ 1.6
LETMD1-210ENST00000547555 APLP2Q06481 763 aa25.06■■□□□ 1.6
LETMD1-210ENST00000547555 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.04■■□□□ 1.6
LETMD1-210ENST00000547555 MAP3K4Q9Y6R4 1608 aa25.03■■□□□ 1.6
LETMD1-210ENST00000547555 TTC37Q6PGP7 1564 aa25.02■■□□□ 1.6
LETMD1-210ENST00000547555 SUPT6HQ7KZ85 1726 aaKnown RBP25.01■■□□□ 1.59
LETMD1-210ENST00000547555 KANK4Q5T7N3 995 aaPredicted RBP25.01■■□□□ 1.59
LETMD1-210ENST00000547555 KCNH8Q96L42 1107 aa25.01■■□□□ 1.59
LETMD1-210ENST00000547555 FAM69CQ0P6D2 419 aa24.97■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms