RNA–Protein interactions for RNA: ENST00000547338.5

RBFOX1-207, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2 BASIC

Gene RBFOX1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-207ENST00000547338 KIAA0586Q9BVV6 1533 aa28.72■■■□□ 2.19
RBFOX1-207ENST00000547338 PRG4Q92954 1404 aaPredicted RBP28.71■■■□□ 2.19
RBFOX1-207ENST00000547338 JPH4Q96JJ6 628 aa28.7■■■□□ 2.19
RBFOX1-207ENST00000547338 CHIC1Q5VXU3 224 aa28.65■■■□□ 2.18
RBFOX1-207ENST00000547338 RAPGEF2Q9Y4G8 1499 aa28.62■■■□□ 2.17
RBFOX1-207ENST00000547338 IQGAP2Q13576 1575 aa28.53■■■□□ 2.16
RBFOX1-207ENST00000547338 PRXQ9BXM0 1461 aa28.53■■■□□ 2.16
RBFOX1-207ENST00000547338 DISP1Q96F81 1524 aa28.41■■■□□ 2.14
RBFOX1-207ENST00000547338 UGGT2Q9NYU1 1516 aa28.4■■■□□ 2.14
RBFOX1-207ENST00000547338 CTTNBP2Q8WZ74 1663 aa28.38■■■□□ 2.13
RBFOX1-207ENST00000547338 ADCY10Q96PN6 1610 aa28.37■■■□□ 2.13
RBFOX1-207ENST00000547338 TRHP20396 242 aaPredicted RBP28.37■■■□□ 2.13
RBFOX1-207ENST00000547338 CSRNP3Q8WYN3 585 aa28.36■■■□□ 2.13
RBFOX1-207ENST00000547338 EEA1Q15075 1411 aa28.34■■■□□ 2.13
RBFOX1-207ENST00000547338 CARMIL2Q6F5E8 1435 aa28.33■■■□□ 2.13
RBFOX1-207ENST00000547338 PTPRGP23470 1445 aa28.31■■■□□ 2.12
RBFOX1-207ENST00000547338 TNIKQ9UKE5 1360 aa28.3■■■□□ 2.12
RBFOX1-207ENST00000547338 KIAA0556O60303 1618 aa28.29■■■□□ 2.12
RBFOX1-207ENST00000547338 FAM9AQ8IZU1 332 aaPredicted RBP28.22■■■□□ 2.11
RBFOX1-207ENST00000547338 TTBK1Q5TCY1 1321 aaPredicted RBP28.2■■■□□ 2.1
RBFOX1-207ENST00000547338 MAPKBP1O60336 1514 aa28.18■■■□□ 2.1
RBFOX1-207ENST00000547338 KIF13AQ9H1H9 1805 aa28.17■■■□□ 2.1
RBFOX1-207ENST00000547338 UHRF1BP1LA0JNW5 1464 aa28.15■■■□□ 2.1
RBFOX1-207ENST00000547338 KIF21BO75037 1637 aa28.15■■■□□ 2.1
RBFOX1-207ENST00000547338 ABCC2Q92887 1545 aa28.13■■■□□ 2.09
RBFOX1-207ENST00000547338 UACAQ9BZF9 1416 aa28.13■■■□□ 2.09
RBFOX1-207ENST00000547338 GOLGA3Q08378 1498 aa28.12■■■□□ 2.09
RBFOX1-207ENST00000547338 NPM1P06748 294 aaKnown RBP eCLIP28.08■■■□□ 2.09
RBFOX1-207ENST00000547338 ABCC10Q5T3U5 1492 aa28.08■■■□□ 2.09
RBFOX1-207ENST00000547338 SAMD9Q5K651 1589 aa28.06■■■□□ 2.08
RBFOX1-207ENST00000547338 DIP2BQ9P265 1576 aa28.06■■■□□ 2.08
RBFOX1-207ENST00000547338 PLB1Q6P1J6 1458 aa28.04■■■□□ 2.08
RBFOX1-207ENST00000547338 KDM5BQ9UGL1 1544 aa28.03■■■□□ 2.08
RBFOX1-207ENST00000547338 ABCA8O94911 1581 aa28.01■■■□□ 2.08
RBFOX1-207ENST00000547338 ZCCHC11Q5TAX3 1644 aaKnown RBP27.97■■■□□ 2.07
RBFOX1-207ENST00000547338 ASXL2Q76L83 1435 aa27.97■■■□□ 2.07
RBFOX1-207ENST00000547338 FAM69CQ0P6D2 419 aa27.96■■■□□ 2.07
RBFOX1-207ENST00000547338 P3H3Q8IVL6 736 aa27.95■■■□□ 2.06
RBFOX1-207ENST00000547338 EHMT2Q96KQ7 1210 aa27.87■■■□□ 2.05
RBFOX1-207ENST00000547338 FHOD3Q2V2M9 1422 aa27.85■■■□□ 2.05
RBFOX1-207ENST00000547338 RANGAP1P46060 587 aaPredicted RBP27.85■■■□□ 2.05
RBFOX1-207ENST00000547338 GLI2P10070 1586 aa27.84■■■□□ 2.05
RBFOX1-207ENST00000547338 EFCAB5A4FU69 1503 aa27.82■■■□□ 2.04
RBFOX1-207ENST00000547338 EPRSP07814 1512 aaKnown RBP27.82■■■□□ 2.04
RBFOX1-207ENST00000547338 WDR7Q9Y4E6 1490 aa27.79■■■□□ 2.04
RBFOX1-207ENST00000547338 TSPOAP1O95153 1857 aa27.78■■■□□ 2.04
RBFOX1-207ENST00000547338 UBTFP17480 764 aaKnown RBP27.78■■■□□ 2.04
RBFOX1-207ENST00000547338 RAPGEF6Q8TEU7 1601 aa27.78■■■□□ 2.04
RBFOX1-207ENST00000547338 PPRC1Q5VV67 1664 aaKnown RBP27.78■■■□□ 2.04
RBFOX1-207ENST00000547338 ATP10BO94823 1461 aa27.77■■■□□ 2.04
RBFOX1-207ENST00000547338 NUP153P49790 1475 aaKnown RBP27.73■■■□□ 2.03
RBFOX1-207ENST00000547338 MAP3K4Q9Y6R4 1608 aa27.73■■■□□ 2.03
RBFOX1-207ENST00000547338 ARHGAP35Q9NRY4 1499 aa27.72■■■□□ 2.03
RBFOX1-207ENST00000547338 ARID3CA6NKF2 412 aa27.71■■■□□ 2.03
RBFOX1-207ENST00000547338 KDM6BO15054 1643 aa27.6■■■□□ 2.01
RBFOX1-207ENST00000547338 KCNH8Q96L42 1107 aa27.58■■■□□ 2.01
RBFOX1-207ENST00000547338 CFAP43Q8NDM7 1665 aa27.58■■■□□ 2
RBFOX1-207ENST00000547338 COL17A1Q9UMD9 1497 aaPredicted RBP27.54■■■□□ 2
RBFOX1-207ENST00000547338 FMN1Q68DA7 1419 aa27.52■■■□□ 2
RBFOX1-207ENST00000547338 CD109Q6YHK3 1445 aa27.51■■■□□ 2
RBFOX1-207ENST00000547338 MAGI3Q5TCQ9 1506 aa27.51■■□□□ 1.99
RBFOX1-207ENST00000547338 TEX14Q8IWB6 1497 aa27.51■■□□□ 1.99
RBFOX1-207ENST00000547338 CDK13Q14004 1512 aaKnown RBP27.51■■□□□ 1.99
RBFOX1-207ENST00000547338 ABCA9Q8IUA7 1624 aa27.51■■□□□ 1.99
RBFOX1-207ENST00000547338 HECW1Q76N89 1606 aa27.46■■□□□ 1.99
RBFOX1-207ENST00000547338 LOC105371045A0A1W2PR82 267 aa27.45■■□□□ 1.98
RBFOX1-207ENST00000547338 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.45■■□□□ 1.98
RBFOX1-207ENST00000547338 HNRNPUL2Q1KMD3 747 aaKnown RBP27.45■■□□□ 1.98
RBFOX1-207ENST00000547338 LRRIQ1Q96JM4 1722 aa27.44■■□□□ 1.98
RBFOX1-207ENST00000547338 CLIP1P30622 1438 aa27.42■■□□□ 1.98
RBFOX1-207ENST00000547338 PCF11O94913 1555 aaKnown RBP27.39■■□□□ 1.98
RBFOX1-207ENST00000547338 PLEKHD1A6NEE1 506 aa27.36■■□□□ 1.97
RBFOX1-207ENST00000547338 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.35■■□□□ 1.97
RBFOX1-207ENST00000547338 CASKIN1Q8WXD9 1431 aa27.35■■□□□ 1.97
RBFOX1-207ENST00000547338 TTC37Q6PGP7 1564 aa27.34■■□□□ 1.97
RBFOX1-207ENST00000547338 ATP1B4Q9UN42 357 aaPredicted RBP27.31■■□□□ 1.96
RBFOX1-207ENST00000547338 ARAP3Q8WWN8 1544 aa27.3■■□□□ 1.96
RBFOX1-207ENST00000547338 FYCO1Q9BQS8 1478 aa27.26■■□□□ 1.95
RBFOX1-207ENST00000547338 CEP162Q5TB80 1403 aa27.26■■□□□ 1.95
RBFOX1-207ENST00000547338 NEO1Q92859 1461 aa27.25■■□□□ 1.95
RBFOX1-207ENST00000547338 KIF14Q15058 1648 aa27.25■■□□□ 1.95
RBFOX1-207ENST00000547338 TROQ12816 1431 aaPredicted RBP27.22■■□□□ 1.95
RBFOX1-207ENST00000547338 CCDC18Q5T9S5 1454 aa27.21■■□□□ 1.95
RBFOX1-207ENST00000547338 PHLDB1Q86UU1 1377 aa27.2■■□□□ 1.95
RBFOX1-207ENST00000547338 FRMPD1Q5SYB0 1578 aa27.19■■□□□ 1.94
RBFOX1-207ENST00000547338 FANCAO15360 1455 aa27.17■■□□□ 1.94
RBFOX1-207ENST00000547338 CDK11AQ9UQ88 783 aaPredicted RBP27.16■■□□□ 1.94
RBFOX1-207ENST00000547338 PLCH2O75038 1416 aa27.15■■□□□ 1.94
RBFOX1-207ENST00000547338 KDM4FA0A1W2PPD8 638 aa27.13■■□□□ 1.93
RBFOX1-207ENST00000547338 AKNAQ7Z591 1439 aa27.12■■□□□ 1.93
RBFOX1-207ENST00000547338 CFAP74Q9C0B2 1584 aa27.12■■□□□ 1.93
RBFOX1-207ENST00000547338 RAPGEF3O95398 923 aa27.11■■□□□ 1.93
RBFOX1-207ENST00000547338 MYO5CQ9NQX4 1742 aa27.11■■□□□ 1.93
RBFOX1-207ENST00000547338 RICTORQ6R327 1708 aa27.09■■□□□ 1.93
RBFOX1-207ENST00000547338 DENND4BO75064 1496 aaPredicted RBP27.04■■□□□ 1.92
RBFOX1-207ENST00000547338 CDC42BPBQ9Y5S2 1711 aa27.03■■□□□ 1.92
RBFOX1-207ENST00000547338 ADGRL1O94910 1474 aa27.03■■□□□ 1.92
RBFOX1-207ENST00000547338 AEBP2Q6ZN18 517 aaPredicted RBP27.02■■□□□ 1.92
RBFOX1-207ENST00000547338 PREX2Q70Z35 1606 aa27■■□□□ 1.91
RBFOX1-207ENST00000547338 ZMYM4Q5VZL5 1548 aa26.98■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms