RNA–Protein interactions for RNA: ENST00000546812.1

SSH1-205, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-205ENST00000546812 ILDR1Q86SU0 546 aaPredicted RBP16.84■□□□□ 0.29
SSH1-205ENST00000546812 ERICH3Q5RHP9 1530 aa16.8■□□□□ 0.28
SSH1-205ENST00000546812 MAPKBP1O60336 1514 aa16.8■□□□□ 0.28
SSH1-205ENST00000546812 DIP2BQ9P265 1576 aa16.75■□□□□ 0.27
SSH1-205ENST00000546812 TOP2BQ02880 1626 aa16.74■□□□□ 0.27
SSH1-205ENST00000546812 KDM6BO15054 1643 aa16.72■□□□□ 0.27
SSH1-205ENST00000546812 BIVM-ERCC5R4GMW8 1640 aa16.7■□□□□ 0.26
SSH1-205ENST00000546812 ADCY10Q96PN6 1610 aa16.69■□□□□ 0.26
SSH1-205ENST00000546812 RUSC2Q8N2Y8 1516 aa16.67■□□□□ 0.26
SSH1-205ENST00000546812 SUPT5HO00267 1087 aaKnown RBP16.64■□□□□ 0.25
SSH1-205ENST00000546812 KIAA0586Q9BVV6 1533 aa16.63■□□□□ 0.25
SSH1-205ENST00000546812 PTPRGP23470 1445 aa16.6■□□□□ 0.25
SSH1-205ENST00000546812 TSPOAP1O95153 1857 aa16.58■□□□□ 0.24
SSH1-205ENST00000546812 IGF1RP08069 1367 aa16.57■□□□□ 0.24
SSH1-205ENST00000546812 ADGRL1O94910 1474 aa16.56■□□□□ 0.24
SSH1-205ENST00000546812 ASXL2Q76L83 1435 aa16.53■□□□□ 0.24
SSH1-205ENST00000546812 TTBK1Q5TCY1 1321 aaPredicted RBP16.53■□□□□ 0.24
SSH1-205ENST00000546812 ABCC2Q92887 1545 aa16.53■□□□□ 0.24
SSH1-205ENST00000546812 PLB1Q6P1J6 1458 aa16.53■□□□□ 0.24
SSH1-205ENST00000546812 TNIKQ9UKE5 1360 aa16.51■□□□□ 0.23
SSH1-205ENST00000546812 GLI2P10070 1586 aa16.5■□□□□ 0.23
SSH1-205ENST00000546812 COL17A1Q9UMD9 1497 aaPredicted RBP16.49■□□□□ 0.23
SSH1-205ENST00000546812 CARMIL2Q6F5E8 1435 aa16.48■□□□□ 0.23
SSH1-205ENST00000546812 KIF27Q86VH2 1401 aa16.47■□□□□ 0.23
SSH1-205ENST00000546812 UHRF1BP1LA0JNW5 1464 aa16.46■□□□□ 0.23
SSH1-205ENST00000546812 HECW2Q9P2P5 1572 aa16.46■□□□□ 0.23
SSH1-205ENST00000546812 PPRC1Q5VV67 1664 aaKnown RBP16.45■□□□□ 0.22
SSH1-205ENST00000546812 UACAQ9BZF9 1416 aa16.43■□□□□ 0.22
SSH1-205ENST00000546812 CARMIL1Q5VZK9 1371 aa16.42■□□□□ 0.22
SSH1-205ENST00000546812 EPRSP07814 1512 aaKnown RBP16.42■□□□□ 0.22
SSH1-205ENST00000546812 CUL7Q14999 1698 aa16.41■□□□□ 0.22
SSH1-205ENST00000546812 TEX14Q8IWB6 1497 aa16.41■□□□□ 0.22
SSH1-205ENST00000546812 KDM5BQ9UGL1 1544 aa16.38■□□□□ 0.21
SSH1-205ENST00000546812 FBXO41Q8TF61 875 aa16.36■□□□□ 0.21
SSH1-205ENST00000546812 MAP3K4Q9Y6R4 1608 aa16.34■□□□□ 0.21
SSH1-205ENST00000546812 DISP1Q96F81 1524 aa16.34■□□□□ 0.21
SSH1-205ENST00000546812 IQGAP2Q13576 1575 aa16.33■□□□□ 0.2
SSH1-205ENST00000546812 WDR7Q9Y4E6 1490 aa16.28■□□□□ 0.2
SSH1-205ENST00000546812 CD109Q6YHK3 1445 aa16.26■□□□□ 0.19
SSH1-205ENST00000546812 ZCCHC11Q5TAX3 1644 aaKnown RBP16.25■□□□□ 0.19
SSH1-205ENST00000546812 MAGI3Q5TCQ9 1506 aa16.24■□□□□ 0.19
SSH1-205ENST00000546812 UGGT2Q9NYU1 1516 aa16.24■□□□□ 0.19
SSH1-205ENST00000546812 KCNH8Q96L42 1107 aa16.24■□□□□ 0.19
SSH1-205ENST00000546812 RAPGEF2Q9Y4G8 1499 aa16.19■□□□□ 0.18
SSH1-205ENST00000546812 KIAA0556O60303 1618 aa16.19■□□□□ 0.18
SSH1-205ENST00000546812 PTPRMP28827 1452 aa16.14■□□□□ 0.17
SSH1-205ENST00000546812 ARAP3Q8WWN8 1544 aa16.14■□□□□ 0.17
SSH1-205ENST00000546812 CFAP43Q8NDM7 1665 aa16.13■□□□□ 0.17
SSH1-205ENST00000546812 KIF21BO75037 1637 aa16.12■□□□□ 0.17
SSH1-205ENST00000546812 PHLDB1Q86UU1 1377 aa16.1■□□□□ 0.17
SSH1-205ENST00000546812 GOLGA3Q08378 1498 aa16.1■□□□□ 0.17
SSH1-205ENST00000546812 ABCA8O94911 1581 aa16.09■□□□□ 0.17
SSH1-205ENST00000546812 RAPGEF3O95398 923 aa16.07■□□□□ 0.16
SSH1-205ENST00000546812 ADAMTSL3P82987 1691 aa16.05■□□□□ 0.16
SSH1-205ENST00000546812 ARID4BQ4LE39 1312 aaPredicted RBP16.04■□□□□ 0.16
SSH1-205ENST00000546812 ARID3CA6NKF2 412 aa16.03■□□□□ 0.16
SSH1-205ENST00000546812 FAM9AQ8IZU1 332 aaPredicted RBP16.03■□□□□ 0.16
SSH1-205ENST00000546812 PCF11O94913 1555 aaKnown RBP16.03■□□□□ 0.16
SSH1-205ENST00000546812 LMTK3Q96Q04 1460 aa16.03■□□□□ 0.16
SSH1-205ENST00000546812 ATP10BO94823 1461 aa16.01■□□□□ 0.15
SSH1-205ENST00000546812 NEO1Q92859 1461 aa15.98■□□□□ 0.15
SSH1-205ENST00000546812 HSPA2P54652 639 aa15.97■□□□□ 0.15
SSH1-205ENST00000546812 CERKQ8TCT0 537 aa15.97■□□□□ 0.15
SSH1-205ENST00000546812 ABCA9Q8IUA7 1624 aa15.95■□□□□ 0.14
SSH1-205ENST00000546812 BCORL1Q5H9F3 1711 aa15.95■□□□□ 0.14
SSH1-205ENST00000546812 P3H3Q8IVL6 736 aa15.95■□□□□ 0.14
SSH1-205ENST00000546812 MADDQ8WXG6 1647 aa15.94■□□□□ 0.14
SSH1-205ENST00000546812 CTTNBP2Q8WZ74 1663 aa15.92■□□□□ 0.14
SSH1-205ENST00000546812 PRXQ9BXM0 1461 aa15.91■□□□□ 0.14
SSH1-205ENST00000546812 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.91■□□□□ 0.14
SSH1-205ENST00000546812 HNRNPUL2Q1KMD3 747 aaKnown RBP15.91■□□□□ 0.14
SSH1-205ENST00000546812 FRMPD1Q5SYB0 1578 aa15.9■□□□□ 0.14
SSH1-205ENST00000546812 PLPPR3Q6T4P5 718 aa15.89■□□□□ 0.13
SSH1-205ENST00000546812 SOCS7O14512 581 aa15.88■□□□□ 0.13
SSH1-205ENST00000546812 ILDR2Q71H61 639 aa15.88■□□□□ 0.13
SSH1-205ENST00000546812 DENND4BO75064 1496 aaPredicted RBP15.88■□□□□ 0.13
SSH1-205ENST00000546812 POGZQ7Z3K3 1410 aa15.87■□□□□ 0.13
SSH1-205ENST00000546812 DISP3Q9P2K9 1392 aa15.87■□□□□ 0.13
SSH1-205ENST00000546812 FHOD3Q2V2M9 1422 aa15.86■□□□□ 0.13
SSH1-205ENST00000546812 ARHGEF40Q8TER5 1519 aa15.85■□□□□ 0.13
SSH1-205ENST00000546812 AKNAQ7Z591 1439 aa15.85■□□□□ 0.13
SSH1-205ENST00000546812 RIMS1Q86UR5 1692 aaKnown RBP15.84■□□□□ 0.13
SSH1-205ENST00000546812 PLEKHD1A6NEE1 506 aa15.83■□□□□ 0.12
SSH1-205ENST00000546812 FANCAO15360 1455 aa15.83■□□□□ 0.12
SSH1-205ENST00000546812 MLECQ14165 292 aa15.81■□□□□ 0.12
SSH1-205ENST00000546812 NUP153P49790 1475 aaKnown RBP15.8■□□□□ 0.12
SSH1-205ENST00000546812 RAPGEF6Q8TEU7 1601 aa15.79■□□□□ 0.12
SSH1-205ENST00000546812 YEATS2Q9ULM3 1422 aa15.79■□□□□ 0.12
SSH1-205ENST00000546812 DMRT2Q9Y5R5 561 aa15.79■□□□□ 0.12
SSH1-205ENST00000546812 MAGI2Q86UL8 1455 aa15.78■□□□□ 0.12
SSH1-205ENST00000546812 RICTORQ6R327 1708 aa15.77■□□□□ 0.11
SSH1-205ENST00000546812 SAMD9Q5K651 1589 aa15.76■□□□□ 0.11
SSH1-205ENST00000546812 ZMYM4Q5VZL5 1548 aa15.76■□□□□ 0.11
SSH1-205ENST00000546812 ZFYVE16Q7Z3T8 1539 aa15.76■□□□□ 0.11
SSH1-205ENST00000546812 EFCAB5A4FU69 1503 aa15.74■□□□□ 0.11
SSH1-205ENST00000546812 CEBPAP49715 358 aaPredicted RBP15.73■□□□□ 0.11
SSH1-205ENST00000546812 CSRNP3Q8WYN3 585 aa15.72■□□□□ 0.11
SSH1-205ENST00000546812 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.72■□□□□ 0.11
SSH1-205ENST00000546812 TTC37Q6PGP7 1564 aa15.71■□□□□ 0.11
SSH1-205ENST00000546812 SCAPERQ9BY12 1400 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms