RNA–Protein interactions for RNA: ENST00000546538.1

CHERP-204, Transcript of calcium homeostasis endoplasmic reticulum protein, humanhuman

TSL 1 (best)

Gene CHERP, Length 1,429 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHERP-204ENST00000546538 KIF27Q86VH2 1401 aa32.74■■■□□ 2.83
CHERP-204ENST00000546538 CUL7Q14999 1698 aa32.67■■■□□ 2.82
CHERP-204ENST00000546538 KIAA0586Q9BVV6 1533 aa32.62■■■□□ 2.81
CHERP-204ENST00000546538 CARMIL1Q5VZK9 1371 aa32.53■■■□□ 2.8
CHERP-204ENST00000546538 KIF13AQ9H1H9 1805 aa32.52■■■□□ 2.8
CHERP-204ENST00000546538 ADCY10Q96PN6 1610 aa32.48■■■□□ 2.79
CHERP-204ENST00000546538 MAPKBP1O60336 1514 aa32.38■■■□□ 2.77
CHERP-204ENST00000546538 ABCC10Q5T3U5 1492 aa32.34■■■□□ 2.77
CHERP-204ENST00000546538 IQGAP2Q13576 1575 aa32.32■■■□□ 2.76
CHERP-204ENST00000546538 DIP2BQ9P265 1576 aa32.3■■■□□ 2.76
CHERP-204ENST00000546538 PTPRGP23470 1445 aa32.27■■■□□ 2.76
CHERP-204ENST00000546538 NPM1P06748 294 aaKnown RBP eCLIP32.26■■■□□ 2.75
CHERP-204ENST00000546538 FAM69CQ0P6D2 419 aa32.25■■■□□ 2.75
CHERP-204ENST00000546538 RAPGEF2Q9Y4G8 1499 aa32.24■■■□□ 2.75
CHERP-204ENST00000546538 DISP1Q96F81 1524 aa32.23■■■□□ 2.75
CHERP-204ENST00000546538 TNIKQ9UKE5 1360 aa32.22■■■□□ 2.75
CHERP-204ENST00000546538 CARMIL2Q6F5E8 1435 aa32.2■■■□□ 2.74
CHERP-204ENST00000546538 TTBK1Q5TCY1 1321 aaPredicted RBP32.19■■■□□ 2.74
CHERP-204ENST00000546538 UGGT2Q9NYU1 1516 aa32.15■■■□□ 2.74
CHERP-204ENST00000546538 ABCC2Q92887 1545 aa32.13■■■□□ 2.73
CHERP-204ENST00000546538 UHRF1BP1LA0JNW5 1464 aa32.08■■■□□ 2.73
CHERP-204ENST00000546538 KIAA0556O60303 1618 aa32.06■■■□□ 2.72
CHERP-204ENST00000546538 UACAQ9BZF9 1416 aa32.05■■■□□ 2.72
CHERP-204ENST00000546538 TSPOAP1O95153 1857 aa32.03■■■□□ 2.72
CHERP-204ENST00000546538 ASXL2Q76L83 1435 aa32.01■■■□□ 2.72
CHERP-204ENST00000546538 PRXQ9BXM0 1461 aa32■■■□□ 2.71
CHERP-204ENST00000546538 CTTNBP2Q8WZ74 1663 aa32■■■□□ 2.71
CHERP-204ENST00000546538 AEBP2Q6ZN18 517 aaPredicted RBP31.99■■■□□ 2.71
CHERP-204ENST00000546538 KDM5BQ9UGL1 1544 aa31.96■■■□□ 2.71
CHERP-204ENST00000546538 PLB1Q6P1J6 1458 aa31.94■■■□□ 2.7
CHERP-204ENST00000546538 PPRC1Q5VV67 1664 aaKnown RBP31.92■■■□□ 2.7
CHERP-204ENST00000546538 KDM6BO15054 1643 aa31.92■■■□□ 2.7
CHERP-204ENST00000546538 GLI2P10070 1586 aa31.92■■■□□ 2.7
CHERP-204ENST00000546538 ZCCHC11Q5TAX3 1644 aaKnown RBP31.89■■■□□ 2.7
CHERP-204ENST00000546538 EPRSP07814 1512 aaKnown RBP31.84■■■□□ 2.69
CHERP-204ENST00000546538 GOLGA3Q08378 1498 aa31.79■■■□□ 2.68
CHERP-204ENST00000546538 ABCA8O94911 1581 aa31.78■■■□□ 2.68
CHERP-204ENST00000546538 MAP3K4Q9Y6R4 1608 aa31.78■■■□□ 2.68
CHERP-204ENST00000546538 COL17A1Q9UMD9 1497 aaPredicted RBP31.71■■■□□ 2.67
CHERP-204ENST00000546538 WDR7Q9Y4E6 1490 aa31.71■■■□□ 2.67
CHERP-204ENST00000546538 CSRNP3Q8WYN3 585 aa31.68■■■□□ 2.66
CHERP-204ENST00000546538 KDM4FA0A1W2PPD8 638 aa31.66■■■□□ 2.66
CHERP-204ENST00000546538 SAMD9Q5K651 1589 aa31.59■■■□□ 2.65
CHERP-204ENST00000546538 P3H3Q8IVL6 736 aa31.59■■■□□ 2.65
CHERP-204ENST00000546538 TEX14Q8IWB6 1497 aa31.56■■■□□ 2.64
CHERP-204ENST00000546538 EEA1Q15075 1411 aa31.52■■■□□ 2.64
CHERP-204ENST00000546538 ATP10BO94823 1461 aa31.51■■■□□ 2.63
CHERP-204ENST00000546538 CFAP43Q8NDM7 1665 aa31.5■■■□□ 2.63
CHERP-204ENST00000546538 KCNH8Q96L42 1107 aa31.49■■■□□ 2.63
CHERP-204ENST00000546538 ARID3CA6NKF2 412 aa31.49■■■□□ 2.63
CHERP-204ENST00000546538 MAGI3Q5TCQ9 1506 aa31.48■■■□□ 2.63
CHERP-204ENST00000546538 CD109Q6YHK3 1445 aa31.48■■■□□ 2.63
CHERP-204ENST00000546538 FAM9AQ8IZU1 332 aaPredicted RBP31.43■■■□□ 2.62
CHERP-204ENST00000546538 RAPGEF6Q8TEU7 1601 aa31.41■■■□□ 2.62
CHERP-204ENST00000546538 ADGRL1O94910 1474 aa31.38■■■□□ 2.61
CHERP-204ENST00000546538 KIF21BO75037 1637 aa31.37■■■□□ 2.61
CHERP-204ENST00000546538 FHOD3Q2V2M9 1422 aa31.37■■■□□ 2.61
CHERP-204ENST00000546538 NUP153P49790 1475 aaKnown RBP31.35■■■□□ 2.61
CHERP-204ENST00000546538 RANGAP1P46060 587 aaPredicted RBP31.34■■■□□ 2.61
CHERP-204ENST00000546538 ABCA9Q8IUA7 1624 aa31.31■■■□□ 2.6
CHERP-204ENST00000546538 ARAP3Q8WWN8 1544 aa31.24■■■□□ 2.59
CHERP-204ENST00000546538 CHIC1Q5VXU3 224 aa31.23■■■□□ 2.59
CHERP-204ENST00000546538 EFCAB5A4FU69 1503 aa31.22■■■□□ 2.59
CHERP-204ENST00000546538 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.15■■■□□ 2.58
CHERP-204ENST00000546538 HNRNPUL2Q1KMD3 747 aaKnown RBP31.15■■■□□ 2.58
CHERP-204ENST00000546538 EHMT2Q96KQ7 1210 aa31.12■■■□□ 2.57
CHERP-204ENST00000546538 NEO1Q92859 1461 aa31.09■■■□□ 2.57
CHERP-204ENST00000546538 FRMPD1Q5SYB0 1578 aa31.08■■■□□ 2.57
CHERP-204ENST00000546538 PHLDB1Q86UU1 1377 aa31.08■■■□□ 2.57
CHERP-204ENST00000546538 CDK13Q14004 1512 aaKnown RBP31.06■■■□□ 2.56
CHERP-204ENST00000546538 RAPGEF3O95398 923 aa31.06■■■□□ 2.56
CHERP-204ENST00000546538 ARHGAP35Q9NRY4 1499 aa31.04■■■□□ 2.56
CHERP-204ENST00000546538 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP31.03■■■□□ 2.56
CHERP-204ENST00000546538 PLEKHD1A6NEE1 506 aa31.02■■■□□ 2.56
CHERP-204ENST00000546538 TTC37Q6PGP7 1564 aa31.02■■■□□ 2.56
CHERP-204ENST00000546538 UBTFP17480 764 aaKnown RBP31.01■■■□□ 2.55
CHERP-204ENST00000546538 HECW2Q9P2P5 1572 aa30.94■■■□□ 2.54
CHERP-204ENST00000546538 RICTORQ6R327 1708 aa30.92■■■□□ 2.54
CHERP-204ENST00000546538 FANCAO15360 1455 aa30.91■■■□□ 2.54
CHERP-204ENST00000546538 AKNAQ7Z591 1439 aa30.91■■■□□ 2.54
CHERP-204ENST00000546538 FMN1Q68DA7 1419 aa30.9■■■□□ 2.54
CHERP-204ENST00000546538 HECW1Q76N89 1606 aa30.88■■■□□ 2.53
CHERP-204ENST00000546538 ADAMTSL3P82987 1691 aa30.88■■■□□ 2.53
CHERP-204ENST00000546538 DENND4BO75064 1496 aaPredicted RBP30.86■■■□□ 2.53
CHERP-204ENST00000546538 LRRIQ1Q96JM4 1722 aa30.84■■■□□ 2.53
CHERP-204ENST00000546538 CFAP74Q9C0B2 1584 aa30.84■■■□□ 2.53
CHERP-204ENST00000546538 ARHGEF40Q8TER5 1519 aa30.84■■■□□ 2.53
CHERP-204ENST00000546538 BCORL1Q5H9F3 1711 aa30.8■■■□□ 2.52
CHERP-204ENST00000546538 KIF14Q15058 1648 aa30.8■■■□□ 2.52
CHERP-204ENST00000546538 PLCH2O75038 1416 aa30.8■■■□□ 2.52
CHERP-204ENST00000546538 ATP1B4Q9UN42 357 aaPredicted RBP30.8■■■□□ 2.52
CHERP-204ENST00000546538 ZMYM4Q5VZL5 1548 aa30.78■■■□□ 2.52
CHERP-204ENST00000546538 PTPRMP28827 1452 aa30.77■■■□□ 2.52
CHERP-204ENST00000546538 SIGLEC1Q9BZZ2 1709 aa30.76■■■□□ 2.52
CHERP-204ENST00000546538 MADDQ8WXG6 1647 aa30.74■■■□□ 2.51
CHERP-204ENST00000546538 YEATS2Q9ULM3 1422 aa30.74■■■□□ 2.51
CHERP-204ENST00000546538 TROQ12816 1431 aaPredicted RBP30.71■■■□□ 2.51
CHERP-204ENST00000546538 MYO5CQ9NQX4 1742 aa30.71■■■□□ 2.51
CHERP-204ENST00000546538 POGZQ7Z3K3 1410 aa30.69■■■□□ 2.5
CHERP-204ENST00000546538 SCAPERQ9BY12 1400 aa30.69■■■□□ 2.5
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms