RNA–Protein interactions for RNA: ENST00000546039.5

PAAF1-216, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 3

Gene PAAF1, Length 805 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-216ENST00000546039 OSCARQ8IYS5 282 aa17.67■□□□□ 0.42
PAAF1-216ENST00000546039 SHROOM2Q13796 1616 aa17.65■□□□□ 0.42
PAAF1-216ENST00000546039 KIAA0586Q9BVV6 1533 aa17.65■□□□□ 0.42
PAAF1-216ENST00000546039 UGGT2Q9NYU1 1516 aa17.56■□□□□ 0.4
PAAF1-216ENST00000546039 UBTFP17480 764 aaKnown RBP17.54■□□□□ 0.4
PAAF1-216ENST00000546039 EHMT2Q96KQ7 1210 aa17.53■□□□□ 0.4
PAAF1-216ENST00000546039 TNIKQ9UKE5 1360 aa17.52■□□□□ 0.39
PAAF1-216ENST00000546039 SAMD9Q5K651 1589 aa17.5■□□□□ 0.39
PAAF1-216ENST00000546039 KIAA0556O60303 1618 aa17.5■□□□□ 0.39
PAAF1-216ENST00000546039 EFCAB5A4FU69 1503 aa17.49■□□□□ 0.39
PAAF1-216ENST00000546039 DNAJC5Q9H3Z4 198 aa17.49■□□□□ 0.39
PAAF1-216ENST00000546039 RIMBP3CA6NJZ7 1639 aa17.49■□□□□ 0.39
PAAF1-216ENST00000546039 RIMBP3BA6NNM3 1639 aa17.49■□□□□ 0.39
PAAF1-216ENST00000546039 RIMBP3Q9UFD9 1639 aa17.49■□□□□ 0.39
PAAF1-216ENST00000546039 ARHGEF11O15085 1522 aa17.48■□□□□ 0.39
PAAF1-216ENST00000546039 JPH4Q96JJ6 628 aa17.48■□□□□ 0.39
PAAF1-216ENST00000546039 PRG4Q92954 1404 aaPredicted RBP17.47■□□□□ 0.39
PAAF1-216ENST00000546039 ERCC6L2Q5T890 1561 aa17.46■□□□□ 0.39
PAAF1-216ENST00000546039 DISP1Q96F81 1524 aa17.46■□□□□ 0.39
PAAF1-216ENST00000546039 CARMIL2Q6F5E8 1435 aa17.46■□□□□ 0.39
PAAF1-216ENST00000546039 LOC105371045A0A1W2PR82 267 aa17.43■□□□□ 0.38
PAAF1-216ENST00000546039 CEP162Q5TB80 1403 aa17.38■□□□□ 0.37
PAAF1-216ENST00000546039 CLIP1P30622 1438 aa17.38■□□□□ 0.37
PAAF1-216ENST00000546039 ARHGAP35Q9NRY4 1499 aa17.37■□□□□ 0.37
PAAF1-216ENST00000546039 ARAP1Q96P48 1450 aa17.36■□□□□ 0.37
PAAF1-216ENST00000546039 RANGAP1P46060 587 aaPredicted RBP17.33■□□□□ 0.36
PAAF1-216ENST00000546039 FHOD3Q2V2M9 1422 aa17.32■□□□□ 0.36
PAAF1-216ENST00000546039 PTPRGP23470 1445 aa17.3■□□□□ 0.36
PAAF1-216ENST00000546039 P3H3Q8IVL6 736 aa17.27■□□□□ 0.36
PAAF1-216ENST00000546039 RAPGEF6Q8TEU7 1601 aa17.27■□□□□ 0.36
PAAF1-216ENST00000546039 ABCA8O94911 1581 aa17.27■□□□□ 0.35
PAAF1-216ENST00000546039 FMN1Q68DA7 1419 aa17.26■□□□□ 0.35
PAAF1-216ENST00000546039 ADCY10Q96PN6 1610 aa17.25■□□□□ 0.35
PAAF1-216ENST00000546039 ABCC2Q92887 1545 aa17.23■□□□□ 0.35
PAAF1-216ENST00000546039 HECW1Q76N89 1606 aa17.22■□□□□ 0.35
PAAF1-216ENST00000546039 UHRF1BP1LA0JNW5 1464 aa17.22■□□□□ 0.35
PAAF1-216ENST00000546039 PCF11O94913 1555 aaKnown RBP17.22■□□□□ 0.35
PAAF1-216ENST00000546039 UACAQ9BZF9 1416 aa17.21■□□□□ 0.35
PAAF1-216ENST00000546039 PLB1Q6P1J6 1458 aa17.21■□□□□ 0.35
PAAF1-216ENST00000546039 TTBK1Q5TCY1 1321 aaPredicted RBP17.21■□□□□ 0.34
PAAF1-216ENST00000546039 LRRIQ1Q96JM4 1722 aa17.18■□□□□ 0.34
PAAF1-216ENST00000546039 CYB5RLQ6IPT4 315 aa17.18■□□□□ 0.34
PAAF1-216ENST00000546039 FYCO1Q9BQS8 1478 aa17.18■□□□□ 0.34
PAAF1-216ENST00000546039 VPS8Q8N3P4 1428 aa17.16■□□□□ 0.34
PAAF1-216ENST00000546039 ZCCHC11Q5TAX3 1644 aaKnown RBP17.16■□□□□ 0.34
PAAF1-216ENST00000546039 CASKIN1Q8WXD9 1431 aa17.15■□□□□ 0.34
PAAF1-216ENST00000546039 NUP153P49790 1475 aaKnown RBP17.13■□□□□ 0.33
PAAF1-216ENST00000546039 KDM5BQ9UGL1 1544 aa17.13■□□□□ 0.33
PAAF1-216ENST00000546039 CFAP43Q8NDM7 1665 aa17.11■□□□□ 0.33
PAAF1-216ENST00000546039 CCDC18Q5T9S5 1454 aa17.1■□□□□ 0.33
PAAF1-216ENST00000546039 EPRSP07814 1512 aaKnown RBP17.08■□□□□ 0.32
PAAF1-216ENST00000546039 MAPKBP1O60336 1514 aa17.06■□□□□ 0.32
PAAF1-216ENST00000546039 CDK13Q14004 1512 aaKnown RBP17.06■□□□□ 0.32
PAAF1-216ENST00000546039 ATP10BO94823 1461 aa17.05■□□□□ 0.32
PAAF1-216ENST00000546039 NPM1P06748 294 aaKnown RBP eCLIP17.04■□□□□ 0.32
PAAF1-216ENST00000546039 TIAM1Q13009 1591 aa17.02■□□□□ 0.32
PAAF1-216ENST00000546039 ATP1B4Q9UN42 357 aaPredicted RBP17.02■□□□□ 0.32
PAAF1-216ENST00000546039 MAP3K1Q13233 1512 aa17.01■□□□□ 0.31
PAAF1-216ENST00000546039 ASXL2Q76L83 1435 aa16.98■□□□□ 0.31
PAAF1-216ENST00000546039 WDR7Q9Y4E6 1490 aa16.98■□□□□ 0.31
PAAF1-216ENST00000546039 ARID3CA6NKF2 412 aa16.97■□□□□ 0.31
PAAF1-216ENST00000546039 KIF13AQ9H1H9 1805 aa16.97■□□□□ 0.31
PAAF1-216ENST00000546039 EHBP1L1Q8N3D4 1523 aa16.96■□□□□ 0.3
PAAF1-216ENST00000546039 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.95■□□□□ 0.3
PAAF1-216ENST00000546039 HNRNPUL2Q1KMD3 747 aaKnown RBP16.95■□□□□ 0.3
PAAF1-216ENST00000546039 DIP2BQ9P265 1576 aa16.94■□□□□ 0.3
PAAF1-216ENST00000546039 KIF14Q15058 1648 aa16.94■□□□□ 0.3
PAAF1-216ENST00000546039 MAGI3Q5TCQ9 1506 aa16.94■□□□□ 0.3
PAAF1-216ENST00000546039 CDK11AQ9UQ88 783 aaPredicted RBP16.93■□□□□ 0.3
PAAF1-216ENST00000546039 TROQ12816 1431 aaPredicted RBP16.92■□□□□ 0.3
PAAF1-216ENST00000546039 SUPT6HQ7KZ85 1726 aaKnown RBP16.92■□□□□ 0.3
PAAF1-216ENST00000546039 GLI2P10070 1586 aa16.91■□□□□ 0.3
PAAF1-216ENST00000546039 APLP2Q06481 763 aa16.91■□□□□ 0.3
PAAF1-216ENST00000546039 PLEKHD1A6NEE1 506 aa16.9■□□□□ 0.3
PAAF1-216ENST00000546039 ABCA9Q8IUA7 1624 aa16.89■□□□□ 0.29
PAAF1-216ENST00000546039 ABCC10Q5T3U5 1492 aa16.89■□□□□ 0.29
PAAF1-216ENST00000546039 LRRC9Q6ZRR7 1453 aa16.89■□□□□ 0.29
PAAF1-216ENST00000546039 MTUS2Q5JR59 1369 aa16.89■□□□□ 0.29
PAAF1-216ENST00000546039 MYO5CQ9NQX4 1742 aa16.88■□□□□ 0.29
PAAF1-216ENST00000546039 MAP3K4Q9Y6R4 1608 aa16.87■□□□□ 0.29
PAAF1-216ENST00000546039 TTC37Q6PGP7 1564 aa16.86■□□□□ 0.29
PAAF1-216ENST00000546039 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.85■□□□□ 0.29
PAAF1-216ENST00000546039 ITSN2Q9NZM3 1697 aa16.85■□□□□ 0.29
PAAF1-216ENST00000546039 CDC42BPAQ5VT25 1732 aa16.84■□□□□ 0.29
PAAF1-216ENST00000546039 TSPOAP1O95153 1857 aa16.84■□□□□ 0.29
PAAF1-216ENST00000546039 PREX2Q70Z35 1606 aa16.81■□□□□ 0.28
PAAF1-216ENST00000546039 PPRC1Q5VV67 1664 aaKnown RBP16.8■□□□□ 0.28
PAAF1-216ENST00000546039 NCOA2Q15596 1464 aa16.8■□□□□ 0.28
PAAF1-216ENST00000546039 CDC42BPBQ9Y5S2 1711 aa16.79■□□□□ 0.28
PAAF1-216ENST00000546039 KCNH8Q96L42 1107 aa16.79■□□□□ 0.28
PAAF1-216ENST00000546039 CFAP74Q9C0B2 1584 aa16.78■□□□□ 0.28
PAAF1-216ENST00000546039 KANK4Q5T7N3 995 aaPredicted RBP16.78■□□□□ 0.28
PAAF1-216ENST00000546039 ARAP3Q8WWN8 1544 aa16.78■□□□□ 0.28
PAAF1-216ENST00000546039 FAM69CQ0P6D2 419 aa16.76■□□□□ 0.27
PAAF1-216ENST00000546039 CD109Q6YHK3 1445 aa16.74■□□□□ 0.27
PAAF1-216ENST00000546039 TEX14Q8IWB6 1497 aa16.73■□□□□ 0.27
PAAF1-216ENST00000546039 TRHP20396 242 aaPredicted RBP16.72■□□□□ 0.27
PAAF1-216ENST00000546039 CCNB3Q8WWL7 1395 aa16.72■□□□□ 0.27
PAAF1-216ENST00000546039 PLCH2O75038 1416 aa16.7■□□□□ 0.26
PAAF1-216ENST00000546039 ARHGAP5Q13017 1502 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms