RNA–Protein interactions for RNA: ENST00000546039.5

PAAF1-216, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 3

Gene PAAF1, Length 805 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-216ENST00000546039 NISCHQ9Y2I1 1504 aa25.65■■□□□ 1.7
PAAF1-216ENST00000546039 CCDC180Q9P1Z9 1646 aa22.79■■□□□ 1.24
PAAF1-216ENST00000546039 ABCC9O60706 1549 aa21.79■■□□□ 1.08
PAAF1-216ENST00000546039 ZCCHC6Q5VYS8 1495 aaKnown RBP21.46■■□□□ 1.03
PAAF1-216ENST00000546039 DCAF1Q9Y4B6 1507 aa21.29■■□□□ 1
PAAF1-216ENST00000546039 NACADO15069 1562 aa21.26■□□□□ 0.99
PAAF1-216ENST00000546039 MYO15BQ96JP2 1530 aa21.24■□□□□ 0.99
PAAF1-216ENST00000546039 RB1CC1Q8TDY2 1594 aa21.21■□□□□ 0.99
PAAF1-216ENST00000546039 DCAF8L2P0C7V8 631 aa21.12■□□□□ 0.97
PAAF1-216ENST00000546039 UNC13AQ9UPW8 1703 aa20.84■□□□□ 0.93
PAAF1-216ENST00000546039 SCRIBQ14160 1630 aa20.73■□□□□ 0.91
PAAF1-216ENST00000546039 BICRAQ9NZM4 1560 aa20.53■□□□□ 0.88
PAAF1-216ENST00000546039 SHROOM4Q9ULL8 1493 aa20.4■□□□□ 0.86
PAAF1-216ENST00000546039 PABPN1Q86U42 306 aaKnown RBP eCLIP20.32■□□□□ 0.84
PAAF1-216ENST00000546039 EIF4G1Q04637 1599 aaKnown RBP19.95■□□□□ 0.78
PAAF1-216ENST00000546039 BAZ1AQ9NRL2 1556 aaPredicted RBP19.89■□□□□ 0.77
PAAF1-216ENST00000546039 SMARCA4P51532 1647 aa19.88■□□□□ 0.77
PAAF1-216ENST00000546039 CECR2Q9BXF3 1484 aa19.88■□□□□ 0.77
PAAF1-216ENST00000546039 CC2D2AQ9P2K1 1620 aa19.8■□□□□ 0.76
PAAF1-216ENST00000546039 MROH2BQ7Z745 1585 aa19.75■□□□□ 0.75
PAAF1-216ENST00000546039 PEG3Q9GZU2 1588 aa19.69■□□□□ 0.74
PAAF1-216ENST00000546039 SMARCA2P51531 1590 aa19.67■□□□□ 0.74
PAAF1-216ENST00000546039 RSF1Q96T23 1441 aaPredicted RBP19.61■□□□□ 0.73
PAAF1-216ENST00000546039 WIZO95785 1651 aa19.61■□□□□ 0.73
PAAF1-216ENST00000546039 ATAD2BQ9ULI0 1458 aa19.6■□□□□ 0.73
PAAF1-216ENST00000546039 DNAJC5BQ9UF47 199 aa19.57■□□□□ 0.72
PAAF1-216ENST00000546039 HMGXB3Q12766 1538 aa19.56■□□□□ 0.72
PAAF1-216ENST00000546039 NCAPD3P42695 1498 aa19.54■□□□□ 0.72
PAAF1-216ENST00000546039 BAZ1BQ9UIG0 1483 aaKnown RBP19.49■□□□□ 0.71
PAAF1-216ENST00000546039 TOP2AP11388 1531 aaKnown RBP19.43■□□□□ 0.7
PAAF1-216ENST00000546039 SUPT5HO00267 1087 aaKnown RBP19.3■□□□□ 0.68
PAAF1-216ENST00000546039 CCDC88BA6NC98 1476 aa19.12■□□□□ 0.65
PAAF1-216ENST00000546039 PRDM2Q13029 1718 aa19.08■□□□□ 0.65
PAAF1-216ENST00000546039 LAMC3Q9Y6N6 1575 aa19.06■□□□□ 0.64
PAAF1-216ENST00000546039 CFTRP13569 1480 aa18.97■□□□□ 0.63
PAAF1-216ENST00000546039 CADPSQ9ULU8 1353 aa18.96■□□□□ 0.63
PAAF1-216ENST00000546039 NESP48681 1621 aa18.96■□□□□ 0.63
PAAF1-216ENST00000546039 KIF21AQ7Z4S6 1674 aa18.89■□□□□ 0.61
PAAF1-216ENST00000546039 PDS5BQ9NTI5 1447 aa18.83■□□□□ 0.61
PAAF1-216ENST00000546039 ERCC6Q03468 1493 aa18.78■□□□□ 0.6
PAAF1-216ENST00000546039 FANCD2Q9BXW9 1451 aa18.78■□□□□ 0.6
PAAF1-216ENST00000546039 CEP164Q9UPV0 1460 aa18.76■□□□□ 0.59
PAAF1-216ENST00000546039 THOC2Q8NI27 1593 aaKnown RBP18.71■□□□□ 0.59
PAAF1-216ENST00000546039 MRC2Q9UBG0 1479 aa18.65■□□□□ 0.58
PAAF1-216ENST00000546039 WDR62O43379 1518 aa18.61■□□□□ 0.57
PAAF1-216ENST00000546039 DNMBPQ6XZF7 1577 aa18.59■□□□□ 0.57
PAAF1-216ENST00000546039 ABCC8Q09428 1581 aa18.58■□□□□ 0.56
PAAF1-216ENST00000546039 URB2Q14146 1524 aaKnown RBP18.58■□□□□ 0.56
PAAF1-216ENST00000546039 BIVM-ERCC5R4GMW8 1640 aa18.55■□□□□ 0.56
PAAF1-216ENST00000546039 TOPBP1Q92547 1522 aa18.54■□□□□ 0.56
PAAF1-216ENST00000546039 CUX1P39880 1505 aa18.53■□□□□ 0.56
PAAF1-216ENST00000546039 WRNQ14191 1432 aaPredicted RBP eCLIP18.51■□□□□ 0.55
PAAF1-216ENST00000546039 TOP2BQ02880 1626 aa18.51■□□□□ 0.55
PAAF1-216ENST00000546039 SYNJ1O43426 1573 aa18.5■□□□□ 0.55
PAAF1-216ENST00000546039 CUX2O14529 1486 aa18.49■□□□□ 0.55
PAAF1-216ENST00000546039 POLA1P09884 1462 aaPredicted RBP18.4■□□□□ 0.54
PAAF1-216ENST00000546039 FGD5Q6ZNL6 1462 aa18.4■□□□□ 0.54
PAAF1-216ENST00000546039 WDR97A6NE52 1622 aa18.37■□□□□ 0.53
PAAF1-216ENST00000546039 TARBP1Q13395 1621 aaKnown RBP18.35■□□□□ 0.53
PAAF1-216ENST00000546039 IFT140Q96RY7 1462 aa18.33■□□□□ 0.53
PAAF1-216ENST00000546039 SOGA1O94964 1423 aa18.28■□□□□ 0.52
PAAF1-216ENST00000546039 RAD54L2Q9Y4B4 1467 aa18.27■□□□□ 0.52
PAAF1-216ENST00000546039 ABCA10Q8WWZ4 1543 aa18.26■□□□□ 0.51
PAAF1-216ENST00000546039 EIF4G3O43432 1585 aaKnown RBP18.23■□□□□ 0.51
PAAF1-216ENST00000546039 CHIC1Q5VXU3 224 aa18.23■□□□□ 0.51
PAAF1-216ENST00000546039 TRIM41Q8WV44 630 aa18.23■□□□□ 0.51
PAAF1-216ENST00000546039 ABCA5Q8WWZ7 1642 aa18.22■□□□□ 0.51
PAAF1-216ENST00000546039 PBRM1Q86U86 1689 aa18.2■□□□□ 0.5
PAAF1-216ENST00000546039 ZNF608Q9ULD9 1512 aaPredicted RBP18.18■□□□□ 0.5
PAAF1-216ENST00000546039 GAPVD1Q14C86 1478 aa18.12■□□□□ 0.49
PAAF1-216ENST00000546039 AQRO60306 1485 aaKnown RBP eCLIP18.1■□□□□ 0.492e-6■■■□□ 17.2
PAAF1-216ENST00000546039 KIF27Q86VH2 1401 aa18.1■□□□□ 0.49
PAAF1-216ENST00000546039 TDRD9Q8NDG6 1382 aaKnown RBP18.1■□□□□ 0.49
PAAF1-216ENST00000546039 ERICH3Q5RHP9 1530 aa18.08■□□□□ 0.48
PAAF1-216ENST00000546039 GRIN2BQ13224 1484 aa18.07■□□□□ 0.48
PAAF1-216ENST00000546039 CUL7Q14999 1698 aa18.04■□□□□ 0.48
PAAF1-216ENST00000546039 MAGI1Q96QZ7 1491 aaPredicted RBP18.02■□□□□ 0.48
PAAF1-216ENST00000546039 EEA1Q15075 1411 aa18.02■□□□□ 0.48
PAAF1-216ENST00000546039 ADAMTS12P58397 1594 aa18.01■□□□□ 0.47
PAAF1-216ENST00000546039 SNAPC4Q5SXM2 1469 aa18.01■□□□□ 0.47
PAAF1-216ENST00000546039 RUSC2Q8N2Y8 1516 aa17.99■□□□□ 0.47
PAAF1-216ENST00000546039 CHD1O14646 1710 aa17.99■□□□□ 0.47
PAAF1-216ENST00000546039 IGF1RP08069 1367 aa17.92■□□□□ 0.46
PAAF1-216ENST00000546039 SYNJ2O15056 1496 aa17.92■□□□□ 0.46
PAAF1-216ENST00000546039 FHAD1B1AJZ9 1412 aa17.91■□□□□ 0.46
PAAF1-216ENST00000546039 KIF21BO75037 1637 aa17.86■□□□□ 0.45
PAAF1-216ENST00000546039 GRIN2AQ12879 1464 aa17.85■□□□□ 0.45
PAAF1-216ENST00000546039 CARMIL1Q5VZK9 1371 aa17.85■□□□□ 0.45
PAAF1-216ENST00000546039 PRXQ9BXM0 1461 aa17.84■□□□□ 0.45
PAAF1-216ENST00000546039 CSRNP3Q8WYN3 585 aa17.83■□□□□ 0.44
PAAF1-216ENST00000546039 RAPGEF2Q9Y4G8 1499 aa17.82■□□□□ 0.44
PAAF1-216ENST00000546039 FAM9AQ8IZU1 332 aaPredicted RBP17.81■□□□□ 0.44
PAAF1-216ENST00000546039 CHMP7Q8WUX9 453 aaPredicted RBP17.8■□□□□ 0.44
PAAF1-216ENST00000546039 CTTNBP2Q8WZ74 1663 aa17.8■□□□□ 0.44
PAAF1-216ENST00000546039 FBLN2P98095 1184 aa17.77■□□□□ 0.44
PAAF1-216ENST00000546039 CEP170Q5SW79 1584 aa17.77■□□□□ 0.44
PAAF1-216ENST00000546039 NUP160Q12769 1436 aa17.75■□□□□ 0.43
PAAF1-216ENST00000546039 CLASP1Q7Z460 1538 aa17.72■□□□□ 0.43
PAAF1-216ENST00000546039 GOLGA3Q08378 1498 aa17.72■□□□□ 0.43
PAAF1-216ENST00000546039 IQGAP2Q13576 1575 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms