RNA–Protein interactions for RNA: ENST00000545942.5

CHD4-214, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 1 (best)

Gene CHD4, Length 1,317 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-214ENST00000545942 RUSC2Q8N2Y8 1516 aa39.32■■■■□ 3.88
CHD4-214ENST00000545942 CUL7Q14999 1698 aa39.31■■■■□ 3.88
CHD4-214ENST00000545942 KIAA0586Q9BVV6 1533 aa39.2■■■■□ 3.87
CHD4-214ENST00000545942 CARMIL1Q5VZK9 1371 aa39.19■■■■□ 3.86
CHD4-214ENST00000545942 RAPGEF2Q9Y4G8 1499 aa38.86■■■■□ 3.81
CHD4-214ENST00000545942 NPM1P06748 294 aaKnown RBP eCLIP38.86■■■■□ 3.81
CHD4-214ENST00000545942 IQGAP2Q13576 1575 aa38.84■■■■□ 3.81
CHD4-214ENST00000545942 CARMIL2Q6F5E8 1435 aa38.82■■■■□ 3.81
CHD4-214ENST00000545942 ADCY10Q96PN6 1610 aa38.8■■■■□ 3.8
CHD4-214ENST00000545942 PTPRGP23470 1445 aa38.78■■■■□ 3.8
CHD4-214ENST00000545942 TNIKQ9UKE5 1360 aa38.74■■■■□ 3.79
CHD4-214ENST00000545942 MAPKBP1O60336 1514 aa38.73■■■■□ 3.79
CHD4-214ENST00000545942 TTBK1Q5TCY1 1321 aaPredicted RBP38.68■■■■□ 3.78
CHD4-214ENST00000545942 ABCC10Q5T3U5 1492 aa38.67■■■■□ 3.78
CHD4-214ENST00000545942 KIF13AQ9H1H9 1805 aa38.67■■■■□ 3.78
CHD4-214ENST00000545942 DISP1Q96F81 1524 aa38.64■■■■□ 3.78
CHD4-214ENST00000545942 FAM69CQ0P6D2 419 aa38.63■■■■□ 3.77
CHD4-214ENST00000545942 UGGT2Q9NYU1 1516 aa38.62■■■■□ 3.77
CHD4-214ENST00000545942 PRXQ9BXM0 1461 aa38.55■■■■□ 3.76
CHD4-214ENST00000545942 DIP2BQ9P265 1576 aa38.54■■■■□ 3.76
CHD4-214ENST00000545942 ABCC2Q92887 1545 aa38.52■■■■□ 3.76
CHD4-214ENST00000545942 UACAQ9BZF9 1416 aa38.49■■■■□ 3.75
CHD4-214ENST00000545942 UHRF1BP1LA0JNW5 1464 aa38.49■■■■□ 3.75
CHD4-214ENST00000545942 KIAA0556O60303 1618 aa38.48■■■■□ 3.75
CHD4-214ENST00000545942 CTTNBP2Q8WZ74 1663 aa38.45■■■■□ 3.75
CHD4-214ENST00000545942 GOLGA3Q08378 1498 aa38.36■■■■□ 3.73
CHD4-214ENST00000545942 ASXL2Q76L83 1435 aa38.36■■■■□ 3.73
CHD4-214ENST00000545942 PLB1Q6P1J6 1458 aa38.35■■■■□ 3.73
CHD4-214ENST00000545942 CSRNP3Q8WYN3 585 aa38.35■■■■□ 3.73
CHD4-214ENST00000545942 KDM5BQ9UGL1 1544 aa38.31■■■■□ 3.72
CHD4-214ENST00000545942 EEA1Q15075 1411 aa38.24■■■■□ 3.71
CHD4-214ENST00000545942 GLI2P10070 1586 aa38.19■■■■□ 3.7
CHD4-214ENST00000545942 TSPOAP1O95153 1857 aa38.18■■■■□ 3.7
CHD4-214ENST00000545942 ZCCHC11Q5TAX3 1644 aaKnown RBP38.18■■■■□ 3.7
CHD4-214ENST00000545942 AEBP2Q6ZN18 517 aaPredicted RBP38.16■■■■□ 3.7
CHD4-214ENST00000545942 KDM6BO15054 1643 aa38.13■■■■□ 3.69
CHD4-214ENST00000545942 EPRSP07814 1512 aaKnown RBP38.13■■■■□ 3.69
CHD4-214ENST00000545942 ABCA8O94911 1581 aa38.11■■■■□ 3.69
CHD4-214ENST00000545942 FAM9AQ8IZU1 332 aaPredicted RBP38.05■■■■□ 3.68
CHD4-214ENST00000545942 WDR7Q9Y4E6 1490 aa38.05■■■■□ 3.68
CHD4-214ENST00000545942 P3H3Q8IVL6 736 aa38.03■■■■□ 3.68
CHD4-214ENST00000545942 PPRC1Q5VV67 1664 aaKnown RBP38■■■■□ 3.67
CHD4-214ENST00000545942 MAP3K4Q9Y6R4 1608 aa37.97■■■■□ 3.67
CHD4-214ENST00000545942 SAMD9Q5K651 1589 aa37.96■■■■□ 3.67
CHD4-214ENST00000545942 TEX14Q8IWB6 1497 aa37.9■■■■□ 3.66
CHD4-214ENST00000545942 CHIC1Q5VXU3 224 aa37.89■■■■□ 3.66
CHD4-214ENST00000545942 KIF21BO75037 1637 aa37.87■■■■□ 3.65
CHD4-214ENST00000545942 KCNH8Q96L42 1107 aa37.85■■■■□ 3.65
CHD4-214ENST00000545942 RANGAP1P46060 587 aaPredicted RBP37.84■■■■□ 3.65
CHD4-214ENST00000545942 ARID3CA6NKF2 412 aa37.81■■■■□ 3.64
CHD4-214ENST00000545942 ATP10BO94823 1461 aa37.8■■■■□ 3.64
CHD4-214ENST00000545942 CD109Q6YHK3 1445 aa37.78■■■■□ 3.64
CHD4-214ENST00000545942 COL17A1Q9UMD9 1497 aaPredicted RBP37.77■■■■□ 3.64
CHD4-214ENST00000545942 RAPGEF6Q8TEU7 1601 aa37.75■■■■□ 3.63
CHD4-214ENST00000545942 FHOD3Q2V2M9 1422 aa37.75■■■■□ 3.63
CHD4-214ENST00000545942 CFAP43Q8NDM7 1665 aa37.74■■■■□ 3.63
CHD4-214ENST00000545942 MAGI3Q5TCQ9 1506 aa37.73■■■■□ 3.63
CHD4-214ENST00000545942 EFCAB5A4FU69 1503 aa37.68■■■■□ 3.62
CHD4-214ENST00000545942 NUP153P49790 1475 aaKnown RBP37.65■■■■□ 3.62
CHD4-214ENST00000545942 KDM4FA0A1W2PPD8 638 aa37.63■■■■□ 3.62
CHD4-214ENST00000545942 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP37.63■■■■□ 3.62
CHD4-214ENST00000545942 HNRNPUL2Q1KMD3 747 aaKnown RBP37.63■■■■□ 3.62
CHD4-214ENST00000545942 UBTFP17480 764 aaKnown RBP37.62■■■■□ 3.61
CHD4-214ENST00000545942 EHMT2Q96KQ7 1210 aa37.61■■■■□ 3.61
CHD4-214ENST00000545942 ABCA9Q8IUA7 1624 aa37.53■■■■□ 3.6
CHD4-214ENST00000545942 PLEKHD1A6NEE1 506 aa37.45■■■■□ 3.59
CHD4-214ENST00000545942 ARAP3Q8WWN8 1544 aa37.43■■■■□ 3.58
CHD4-214ENST00000545942 PHLDB1Q86UU1 1377 aa37.42■■■■□ 3.58
CHD4-214ENST00000545942 ADGRL1O94910 1474 aa37.41■■■■□ 3.58
CHD4-214ENST00000545942 ARHGAP35Q9NRY4 1499 aa37.38■■■■□ 3.57
CHD4-214ENST00000545942 FMN1Q68DA7 1419 aa37.37■■■■□ 3.57
CHD4-214ENST00000545942 NEO1Q92859 1461 aa37.35■■■■□ 3.57
CHD4-214ENST00000545942 CDK13Q14004 1512 aaKnown RBP37.29■■■■□ 3.56
CHD4-214ENST00000545942 ATP1B4Q9UN42 357 aaPredicted RBP37.25■■■■□ 3.55
CHD4-214ENST00000545942 HECW1Q76N89 1606 aa37.24■■■■□ 3.55
CHD4-214ENST00000545942 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP37.23■■■■□ 3.558e-12■■■□□ 17
CHD4-214ENST00000545942 RAPGEF3O95398 923 aa37.21■■■■□ 3.55
CHD4-214ENST00000545942 TTC37Q6PGP7 1564 aa37.15■■■■□ 3.54
CHD4-214ENST00000545942 FANCAO15360 1455 aa37.15■■■■□ 3.54
CHD4-214ENST00000545942 CDK11AQ9UQ88 783 aaPredicted RBP37.13■■■■□ 3.54
CHD4-214ENST00000545942 AKNAQ7Z591 1439 aa37.12■■■■□ 3.53
CHD4-214ENST00000545942 CFAP74Q9C0B2 1584 aa37.1■■■■□ 3.53
CHD4-214ENST00000545942 FRMPD1Q5SYB0 1578 aa37.09■■■■□ 3.53
CHD4-214ENST00000545942 DENND4BO75064 1496 aaPredicted RBP37.07■■■■□ 3.53
CHD4-214ENST00000545942 PLCH2O75038 1416 aa37.03■■■■□ 3.52
CHD4-214ENST00000545942 TROQ12816 1431 aaPredicted RBP37■■■■□ 3.51
CHD4-214ENST00000545942 CASKIN1Q8WXD9 1431 aa36.98■■■■□ 3.51
CHD4-214ENST00000545942 RICTORQ6R327 1708 aa36.97■■■■□ 3.51
CHD4-214ENST00000545942 CLIP1P30622 1438 aa36.96■■■■□ 3.51
CHD4-214ENST00000545942 KIF14Q15058 1648 aa36.94■■■■□ 3.5
CHD4-214ENST00000545942 PCF11O94913 1555 aaKnown RBP36.94■■■■□ 3.5
CHD4-214ENST00000545942 LRRIQ1Q96JM4 1722 aa36.92■■■■□ 3.5
CHD4-214ENST00000545942 CCDC18Q5T9S5 1454 aa36.91■■■■□ 3.5
CHD4-214ENST00000545942 ARHGEF40Q8TER5 1519 aa36.9■■■■□ 3.5
CHD4-214ENST00000545942 EFCAB2Q5VUJ9 269 aa36.9■■■■□ 3.5
CHD4-214ENST00000545942 SCAPERQ9BY12 1400 aa36.89■■■■□ 3.5
CHD4-214ENST00000545942 ZMYM4Q5VZL5 1548 aa36.89■■■■□ 3.5
CHD4-214ENST00000545942 ARID4BQ4LE39 1312 aaPredicted RBP36.88■■■■□ 3.49
CHD4-214ENST00000545942 MYO5CQ9NQX4 1742 aa36.88■■■■□ 3.49
CHD4-214ENST00000545942 FYCO1Q9BQS8 1478 aa36.85■■■■□ 3.49
Retrieved 100 of 20,778 RNA–protein pairs in 184.6 ms