RNA–Protein interactions for RNA: ENST00000545869.5

PDCD2-214, Transcript of programmed cell death 2, humanhuman

TSL 5

Gene PDCD2, Length 900 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD2-214ENST00000545869 AEBP2Q6ZN18 517 aaPredicted RBP41.64■■■■■ 4.26
PDCD2-214ENST00000545869 IGF1RP08069 1367 aa41.52■■■■■ 4.24
PDCD2-214ENST00000545869 ADCY10Q96PN6 1610 aa41.51■■■■■ 4.23
PDCD2-214ENST00000545869 KIAA0586Q9BVV6 1533 aa41.46■■■■■ 4.23
PDCD2-214ENST00000545869 CUL7Q14999 1698 aa41.45■■■■■ 4.23
PDCD2-214ENST00000545869 MAPKBP1O60336 1514 aa41.44■■■■■ 4.22
PDCD2-214ENST00000545869 KIF27Q86VH2 1401 aa41.44■■■■■ 4.22
PDCD2-214ENST00000545869 ABCC10Q5T3U5 1492 aa41.43■■■■■ 4.22
PDCD2-214ENST00000545869 DIP2BQ9P265 1576 aa41.38■■■■■ 4.22
PDCD2-214ENST00000545869 FAM69CQ0P6D2 419 aa41.35■■■■■ 4.21
PDCD2-214ENST00000545869 NPM1P06748 294 aaKnown RBP eCLIP41.28■■■■■ 4.2
PDCD2-214ENST00000545869 CARMIL1Q5VZK9 1371 aa41.2■■■■■ 4.19
PDCD2-214ENST00000545869 PTPRGP23470 1445 aa41.11■■■■■ 4.17
PDCD2-214ENST00000545869 TSPOAP1O95153 1857 aa41.11■■■■■ 4.17
PDCD2-214ENST00000545869 IQGAP2Q13576 1575 aa41.05■■■■■ 4.16
PDCD2-214ENST00000545869 KDM6BO15054 1643 aa41.04■■■■■ 4.16
PDCD2-214ENST00000545869 TTBK1Q5TCY1 1321 aaPredicted RBP41.04■■■■■ 4.16
PDCD2-214ENST00000545869 TNIKQ9UKE5 1360 aa41.01■■■■■ 4.16
PDCD2-214ENST00000545869 ABCC2Q92887 1545 aa40.98■■■■■ 4.15
PDCD2-214ENST00000545869 CARMIL2Q6F5E8 1435 aa40.98■■■■■ 4.15
PDCD2-214ENST00000545869 DISP1Q96F81 1524 aa40.94■■■■■ 4.14
PDCD2-214ENST00000545869 ASXL2Q76L83 1435 aa40.88■■■■■ 4.13
PDCD2-214ENST00000545869 UHRF1BP1LA0JNW5 1464 aa40.87■■■■■ 4.13
PDCD2-214ENST00000545869 PPRC1Q5VV67 1664 aaKnown RBP40.87■■■■■ 4.13
PDCD2-214ENST00000545869 KDM4FA0A1W2PPD8 638 aa40.81■■■■■ 4.12
PDCD2-214ENST00000545869 UACAQ9BZF9 1416 aa40.81■■■■■ 4.12
PDCD2-214ENST00000545869 GLI2P10070 1586 aa40.81■■■■■ 4.12
PDCD2-214ENST00000545869 PLB1Q6P1J6 1458 aa40.8■■■■■ 4.12
PDCD2-214ENST00000545869 RAPGEF2Q9Y4G8 1499 aa40.8■■■■■ 4.12
PDCD2-214ENST00000545869 UGGT2Q9NYU1 1516 aa40.79■■■■■ 4.12
PDCD2-214ENST00000545869 KIAA0556O60303 1618 aa40.73■■■■■ 4.11
PDCD2-214ENST00000545869 KDM5BQ9UGL1 1544 aa40.71■■■■■ 4.11
PDCD2-214ENST00000545869 ZCCHC11Q5TAX3 1644 aaKnown RBP40.67■■■■■ 4.1
PDCD2-214ENST00000545869 EPRSP07814 1512 aaKnown RBP40.65■■■■■ 4.1
PDCD2-214ENST00000545869 MAP3K4Q9Y6R4 1608 aa40.62■■■■■ 4.09
PDCD2-214ENST00000545869 COL17A1Q9UMD9 1497 aaPredicted RBP40.6■■■■■ 4.09
PDCD2-214ENST00000545869 CTTNBP2Q8WZ74 1663 aa40.55■■■■■ 4.08
PDCD2-214ENST00000545869 WDR7Q9Y4E6 1490 aa40.42■■■■■ 4.06
PDCD2-214ENST00000545869 ADGRL1O94910 1474 aa40.41■■■■■ 4.06
PDCD2-214ENST00000545869 TEX14Q8IWB6 1497 aa40.39■■■■■ 4.06
PDCD2-214ENST00000545869 ABCA8O94911 1581 aa40.38■■■■■ 4.05
PDCD2-214ENST00000545869 PRXQ9BXM0 1461 aa40.36■■■■■ 4.05
PDCD2-214ENST00000545869 GOLGA3Q08378 1498 aa40.32■■■■■ 4.05
PDCD2-214ENST00000545869 CFAP43Q8NDM7 1665 aa40.22■■■■■ 4.03
PDCD2-214ENST00000545869 MAGI3Q5TCQ9 1506 aa40.19■■■■■ 4.02
PDCD2-214ENST00000545869 CD109Q6YHK3 1445 aa40.17■■■■■ 4.02
PDCD2-214ENST00000545869 KCNH8Q96L42 1107 aa40.15■■■■■ 4.02
PDCD2-214ENST00000545869 ARID3CA6NKF2 412 aa40.03■■■■■ 4
PDCD2-214ENST00000545869 P3H3Q8IVL6 736 aa40.02■■■■■ 4
PDCD2-214ENST00000545869 ATP10BO94823 1461 aa40.01■■■■■ 4
PDCD2-214ENST00000545869 SAMD9Q5K651 1589 aa39.98■■■■□ 3.99
PDCD2-214ENST00000545869 HECW2Q9P2P5 1572 aa39.98■■■■□ 3.99
PDCD2-214ENST00000545869 KIF21BO75037 1637 aa39.93■■■■□ 3.98
PDCD2-214ENST00000545869 ABCA9Q8IUA7 1624 aa39.88■■■■□ 3.97
PDCD2-214ENST00000545869 ARAP3Q8WWN8 1544 aa39.88■■■■□ 3.97
PDCD2-214ENST00000545869 CSRNP3Q8WYN3 585 aa39.86■■■■□ 3.97
PDCD2-214ENST00000545869 RAPGEF6Q8TEU7 1601 aa39.85■■■■□ 3.97
PDCD2-214ENST00000545869 ILDR1Q86SU0 546 aaPredicted RBP39.84■■■■□ 3.97
PDCD2-214ENST00000545869 CHIC1Q5VXU3 224 aa39.78■■■■□ 3.96
PDCD2-214ENST00000545869 NUP153P49790 1475 aaKnown RBP39.74■■■■□ 3.95
PDCD2-214ENST00000545869 FHOD3Q2V2M9 1422 aa39.69■■■■□ 3.94
PDCD2-214ENST00000545869 FAM9AQ8IZU1 332 aaPredicted RBP39.68■■■■□ 3.94
PDCD2-214ENST00000545869 FRMPD1Q5SYB0 1578 aa39.67■■■■□ 3.94
PDCD2-214ENST00000545869 NEO1Q92859 1461 aa39.64■■■■□ 3.94
PDCD2-214ENST00000545869 PHLDB1Q86UU1 1377 aa39.64■■■■□ 3.94
PDCD2-214ENST00000545869 RAPGEF3O95398 923 aa39.64■■■■□ 3.94
PDCD2-214ENST00000545869 RANGAP1P46060 587 aaPredicted RBP39.63■■■■□ 3.93
PDCD2-214ENST00000545869 EEA1Q15075 1411 aa39.61■■■■□ 3.93
PDCD2-214ENST00000545869 ADAMTSL3P82987 1691 aa39.6■■■■□ 3.93
PDCD2-214ENST00000545869 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP39.59■■■■□ 3.93
PDCD2-214ENST00000545869 HNRNPUL2Q1KMD3 747 aaKnown RBP39.59■■■■□ 3.93
PDCD2-214ENST00000545869 PTPRMP28827 1452 aa39.5■■■■□ 3.91
PDCD2-214ENST00000545869 BCORL1Q5H9F3 1711 aa39.47■■■■□ 3.91
PDCD2-214ENST00000545869 RICTORQ6R327 1708 aa39.44■■■■□ 3.9
PDCD2-214ENST00000545869 EFCAB5A4FU69 1503 aa39.43■■■■□ 3.9
PDCD2-214ENST00000545869 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP39.43■■■■□ 3.91e-6■■□□□ 13.9
PDCD2-214ENST00000545869 MADDQ8WXG6 1647 aa39.42■■■■□ 3.9
PDCD2-214ENST00000545869 TTC37Q6PGP7 1564 aa39.42■■■■□ 3.9
PDCD2-214ENST00000545869 ARHGEF40Q8TER5 1519 aa39.41■■■■□ 3.9
PDCD2-214ENST00000545869 PLEKHD1A6NEE1 506 aa39.37■■■■□ 3.89
PDCD2-214ENST00000545869 AKNAQ7Z591 1439 aa39.36■■■■□ 3.89
PDCD2-214ENST00000545869 DENND4BO75064 1496 aaPredicted RBP39.36■■■■□ 3.89
PDCD2-214ENST00000545869 CDK13Q14004 1512 aaKnown RBP39.35■■■■□ 3.89
PDCD2-214ENST00000545869 FANCAO15360 1455 aa39.35■■■■□ 3.89
PDCD2-214ENST00000545869 CFAP74Q9C0B2 1584 aa39.3■■■■□ 3.88
PDCD2-214ENST00000545869 SIGLEC1Q9BZZ2 1709 aa39.29■■■■□ 3.88
PDCD2-214ENST00000545869 ARID4BQ4LE39 1312 aaPredicted RBP39.29■■■■□ 3.88
PDCD2-214ENST00000545869 RIMS1Q86UR5 1692 aaKnown RBP39.25■■■■□ 3.87
PDCD2-214ENST00000545869 ZMYM4Q5VZL5 1548 aa39.25■■■■□ 3.87
PDCD2-214ENST00000545869 PCF11O94913 1555 aaKnown RBP39.21■■■■□ 3.87
PDCD2-214ENST00000545869 YEATS2Q9ULM3 1422 aa39.21■■■■□ 3.87
PDCD2-214ENST00000545869 LMTK3Q96Q04 1460 aa39.2■■■■□ 3.87
PDCD2-214ENST00000545869 ZFYVE16Q7Z3T8 1539 aa39.17■■■■□ 3.86
PDCD2-214ENST00000545869 EHMT2Q96KQ7 1210 aa39.16■■■■□ 3.86
PDCD2-214ENST00000545869 HECW1Q76N89 1606 aa39.14■■■■□ 3.86
PDCD2-214ENST00000545869 ARHGAP35Q9NRY4 1499 aa39.11■■■■□ 3.85
PDCD2-214ENST00000545869 PLCH2O75038 1416 aa39.11■■■■□ 3.85
PDCD2-214ENST00000545869 POGZQ7Z3K3 1410 aa39.08■■■■□ 3.85
PDCD2-214ENST00000545869 SCAPERQ9BY12 1400 aa39.06■■■■□ 3.84
PDCD2-214ENST00000545869 MAGI2Q86UL8 1455 aa39.05■■■■□ 3.84
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms