RNA–Protein interactions for RNA: ENST00000545668.5

DDX11-229, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 1 (best) BASIC

Gene DDX11, Length 3,751 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-229ENST00000545668 TDRD9Q8NDG6 1382 aaKnown RBP14.38□□□□□ -0.11
DDX11-229ENST00000545668 ATP1B4Q9UN42 357 aaPredicted RBP14.35□□□□□ -0.11
DDX11-229ENST00000545668 KIF21AQ7Z4S6 1674 aa14.3□□□□□ -0.12
DDX11-229ENST00000545668 GAPVD1Q14C86 1478 aa14.29□□□□□ -0.12
DDX11-229ENST00000545668 ZNF316A6NFI3 1004 aaPredicted RBP14.29□□□□□ -0.12
DDX11-229ENST00000545668 CUL7Q14999 1698 aa14.28□□□□□ -0.12
DDX11-229ENST00000545668 FHAD1B1AJZ9 1412 aa14.27□□□□□ -0.12
DDX11-229ENST00000545668 ITGAEP38570 1179 aa14.25□□□□□ -0.13
DDX11-229ENST00000545668 FHOD3Q2V2M9 1422 aa14.25□□□□□ -0.13
DDX11-229ENST00000545668 WDR97A6NE52 1622 aa14.23□□□□□ -0.13
DDX11-229ENST00000545668 CCNB3Q8WWL7 1395 aa14.22□□□□□ -0.13
DDX11-229ENST00000545668 ABCA5Q8WWZ7 1642 aa14.22□□□□□ -0.13
DDX11-229ENST00000545668 BCL11AQ9H165 835 aa14.21□□□□□ -0.13
DDX11-229ENST00000545668 MRC2Q9UBG0 1479 aa14.21□□□□□ -0.13
DDX11-229ENST00000545668 RRBP1Q9P2E9 1410 aaKnown RBP14.21□□□□□ -0.13
DDX11-229ENST00000545668 TIAM1Q13009 1591 aa14.2□□□□□ -0.14
DDX11-229ENST00000545668 MIER1Q8N108 512 aa14.2□□□□□ -0.14
DDX11-229ENST00000545668 EFCAB5A4FU69 1503 aa14.19□□□□□ -0.14
DDX11-229ENST00000545668 AQRO60306 1485 aaKnown RBP eCLIP14.19□□□□□ -0.143e-7■■■■■ 36.3
DDX11-229ENST00000545668 MAP3K1Q13233 1512 aa14.18□□□□□ -0.14
DDX11-229ENST00000545668 LRRC9Q6ZRR7 1453 aa14.18□□□□□ -0.14
DDX11-229ENST00000545668 TARBP1Q13395 1621 aaKnown RBP14.17□□□□□ -0.14
DDX11-229ENST00000545668 CTTNBP2Q8WZ74 1663 aa14.17□□□□□ -0.14
DDX11-229ENST00000545668 PCF11O94913 1555 aaKnown RBP14.16□□□□□ -0.14
DDX11-229ENST00000545668 FMN1Q68DA7 1419 aa14.16□□□□□ -0.14
DDX11-229ENST00000545668 FAM50AQ14320 339 aaKnown RBP14.16□□□□□ -0.14
DDX11-229ENST00000545668 CASKIN1Q8WXD9 1431 aa14.14□□□□□ -0.15
DDX11-229ENST00000545668 ERCC6Q03468 1493 aa14.14□□□□□ -0.15
DDX11-229ENST00000545668 FYCO1Q9BQS8 1478 aa14.13□□□□□ -0.15
DDX11-229ENST00000545668 PHLDB1Q86UU1 1377 aa14.12□□□□□ -0.15
DDX11-229ENST00000545668 GRIN2BQ13224 1484 aa14.1□□□□□ -0.15
DDX11-229ENST00000545668 IFT140Q96RY7 1462 aa14.1□□□□□ -0.15
DDX11-229ENST00000545668 DHX57Q6P158 1386 aaKnown RBP14.09□□□□□ -0.15
DDX11-229ENST00000545668 MTUS2Q5JR59 1369 aa14.08□□□□□ -0.16
DDX11-229ENST00000545668 ZNF608Q9ULD9 1512 aaPredicted RBP14.08□□□□□ -0.16
DDX11-229ENST00000545668 CLSPNQ9HAW4 1339 aa14.08□□□□□ -0.16
DDX11-229ENST00000545668 CFAP43Q8NDM7 1665 aa14.07□□□□□ -0.16
DDX11-229ENST00000545668 PBRM1Q86U86 1689 aa14.07□□□□□ -0.16
DDX11-229ENST00000545668 WDR62O43379 1518 aa14.06□□□□□ -0.16
DDX11-229ENST00000545668 SAMD9Q5K651 1589 aa14.05□□□□□ -0.16
DDX11-229ENST00000545668 SNAPC4Q5SXM2 1469 aa14.04□□□□□ -0.16
DDX11-229ENST00000545668 ADAMTS12P58397 1594 aa14.03□□□□□ -0.16
DDX11-229ENST00000545668 RAB3GAP2Q9H2M9 1393 aa14.03□□□□□ -0.16
DDX11-229ENST00000545668 BCANQ96GW7 911 aa14.02□□□□□ -0.17
DDX11-229ENST00000545668 FBLN2P98095 1184 aa14.01□□□□□ -0.17
DDX11-229ENST00000545668 IQGAP2Q13576 1575 aa14.01□□□□□ -0.17
DDX11-229ENST00000545668 SETD5Q9C0A6 1442 aa14□□□□□ -0.17
DDX11-229ENST00000545668 ARID3CA6NKF2 412 aa14□□□□□ -0.17
DDX11-229ENST00000545668 CHMP7Q8WUX9 453 aaPredicted RBP14□□□□□ -0.17
DDX11-229ENST00000545668 ERICH6Q7L0X2 663 aa13.99□□□□□ -0.17
DDX11-229ENST00000545668 FGD6Q6ZV73 1430 aa13.96□□□□□ -0.17
DDX11-229ENST00000545668 EIF4G3O43432 1585 aaKnown RBP13.95□□□□□ -0.18
DDX11-229ENST00000545668 NCOA2Q15596 1464 aa13.94□□□□□ -0.18
DDX11-229ENST00000545668 KIAA0586Q9BVV6 1533 aa13.94□□□□□ -0.18
DDX11-229ENST00000545668 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.94□□□□□ -0.18
DDX11-229ENST00000545668 THOC2Q8NI27 1593 aaKnown RBP13.93□□□□□ -0.18
DDX11-229ENST00000545668 GRIN2AQ12879 1464 aa13.93□□□□□ -0.18
DDX11-229ENST00000545668 CCDC18Q5T9S5 1454 aa13.93□□□□□ -0.18
DDX11-229ENST00000545668 MYOM3Q5VTT5 1437 aa13.91□□□□□ -0.18
DDX11-229ENST00000545668 EHBP1L1Q8N3D4 1523 aa13.91□□□□□ -0.18
DDX11-229ENST00000545668 UGGT2Q9NYU1 1516 aa13.91□□□□□ -0.18
DDX11-229ENST00000545668 HECW1Q76N89 1606 aa13.9□□□□□ -0.18
DDX11-229ENST00000545668 MAGI1Q96QZ7 1491 aaPredicted RBP13.9□□□□□ -0.18
DDX11-229ENST00000545668 LRRIQ1Q96JM4 1722 aa13.9□□□□□ -0.19
DDX11-229ENST00000545668 EPRSP07814 1512 aaKnown RBP13.89□□□□□ -0.19
DDX11-229ENST00000545668 SUPT6HQ7KZ85 1726 aaKnown RBP13.89□□□□□ -0.19
DDX11-229ENST00000545668 SYNJ2O15056 1496 aa13.87□□□□□ -0.19
DDX11-229ENST00000545668 CDK13Q14004 1512 aaKnown RBP13.87□□□□□ -0.19
DDX11-229ENST00000545668 MAGI3Q5TCQ9 1506 aa13.86□□□□□ -0.19
DDX11-229ENST00000545668 DISP1Q96F81 1524 aa13.86□□□□□ -0.19
DDX11-229ENST00000545668 SIN3AQ96ST3 1273 aa13.85□□□□□ -0.19
DDX11-229ENST00000545668 CDK11AQ9UQ88 783 aaPredicted RBP13.85□□□□□ -0.19
DDX11-229ENST00000545668 MAPKBP1O60336 1514 aa13.85□□□□□ -0.19
DDX11-229ENST00000545668 CHIC2Q9UKJ5 165 aa13.84□□□□□ -0.19
DDX11-229ENST00000545668 KIAA0556O60303 1618 aa13.84□□□□□ -0.19
DDX11-229ENST00000545668 JPH4Q96JJ6 628 aa13.84□□□□□ -0.19
DDX11-229ENST00000545668 HIRIP3Q9BW71 556 aaPredicted RBP13.83□□□□□ -0.19
DDX11-229ENST00000545668 PTPRKQ15262 1439 aa13.83□□□□□ -0.2
DDX11-229ENST00000545668 PRKCSHP14314 528 aaPredicted RBP13.82□□□□□ -0.2
DDX11-229ENST00000545668 RRP7BPQ9NSQ0 103 aa13.82□□□□□ -0.2
DDX11-229ENST00000545668 CARMIL2Q6F5E8 1435 aa13.81□□□□□ -0.2
DDX11-229ENST00000545668 HFM1A2PYH4 1435 aa13.81□□□□□ -0.2
DDX11-229ENST00000545668 ANP32EQ9BTT0 268 aa13.81□□□□□ -0.2
DDX11-229ENST00000545668 PTPN23Q9H3S7 1636 aa13.8□□□□□ -0.2
DDX11-229ENST00000545668 CEP170Q5SW79 1584 aa13.8□□□□□ -0.2
DDX11-229ENST00000545668 ARHGEF11O15085 1522 aa13.79□□□□□ -0.2
DDX11-229ENST00000545668 DDX10Q13206 875 aaKnown RBP13.79□□□□□ -0.2
DDX11-229ENST00000545668 NUP153P49790 1475 aaKnown RBP13.78□□□□□ -0.2
DDX11-229ENST00000545668 NAIPQ13075 1403 aa13.77□□□□□ -0.2
DDX11-229ENST00000545668 NEFLP07196 543 aa13.77□□□□□ -0.21
DDX11-229ENST00000545668 NUP160Q12769 1436 aa13.77□□□□□ -0.21
DDX11-229ENST00000545668 MIA2Q96PC5 1412 aa13.77□□□□□ -0.21
DDX11-229ENST00000545668 RAPGEF6Q8TEU7 1601 aa13.76□□□□□ -0.21
DDX11-229ENST00000545668 TRIM52Q96A61 297 aa13.76□□□□□ -0.21
DDX11-229ENST00000545668 PLB1Q6P1J6 1458 aa13.75□□□□□ -0.21
DDX11-229ENST00000545668 TIMELESSQ9UNS1 1208 aa13.75□□□□□ -0.21
DDX11-229ENST00000545668 UACAQ9BZF9 1416 aa13.75□□□□□ -0.21
DDX11-229ENST00000545668 TCOF1Q13428 1488 aaKnown RBP13.74□□□□□ -0.21
DDX11-229ENST00000545668 SUPT16HQ9Y5B9 1047 aaKnown RBP13.73□□□□□ -0.21
DDX11-229ENST00000545668 KCNH8Q96L42 1107 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 996.2 ms